* packages/phist: add variant 'fortran' to enable/disable building the Fortran bindings
* xsdk: add phist
* packages/xsdk: add a comment reg. updating phist dependency
* packages/phist: +fortran variant is only for versions 1.7:
* packages/phist: update comments
* xsdk: forgot to specify kernel library for phist (picked tpetra, assuming trilinos+tpetra will be installed)
* packages/phist: add variant 'openmp' to allow disabling OpenMP
* phist: fix compile error due to missing -lm
* flake8: fix warnings
* packages/phist: fix cmake flag: XSDK_ENABLE_Fortran (rather than XSDK_BUILD_Fortran)
* packages/phist: allow disabling building the scamac matrix generator (which causes trouble on some systems)
* packages/xsdk: disable scamac within phist because it caused problems for @balay and is not essential for now
* packages/phist: actually disable scamac via cmake if ~scamac
* phist: disable openmp from xsdk
This commit overhauls the libMesh package script in a number of ways:
* We now inherit from AutotoolsPackage.
* libMesh contains about a dozen third-party dependencies that can
only be provided by the copy bundled with libMesh. This patch
enumerates all such bundled dependencies and disables all of them
by default.
* libMesh supports compilation with external installations of boost,
eigen, hdf5, slepc, and tbb; this patch adds all of them to
package.py.
* libMesh will look for a few system executables (xz, bzip, gdb) by
default. This is now disabled.
* libMesh will now used a copy of perl installed by spack instead of
trying to find the system copy.
* Compilation with non-system MPI installations requires an additional
flag (--with-mpi=); this has been added.
setup-env includes a call to 'ps' to determine what shell is being
used. 'ps' can be instructed to use a different default output format
via the 'PS_FORMAT' env variable. Thus unset this variable before
calling 'ps'.
* Unite Dockerfiles - add build/run/push scripts
* update docker documentation
* update .travis.yml
* switch to using a preprocessor on Dockerfiles
* skip building docker images on pull requests
* update files with copyright info
* tweak when travis builds for docker files are done
The install() function in the miniconda2 & 3 package.py files referenced
self.url, which is hard-coded to 4.3.11. That's not necessary the
version that the user requested, though. Changed the install() function
to reference self.stage.archive_file. Also added a version string for
4.5.11.
Move suite-sparse gcc version constraint from dealii to suite-sparse
package and update it (gcc 4.9 is required as of version 5.2.0 rather
than 5.1.0). The constraint is now expressed as a conflict rather
than a dependency.
W503 and W504 are issued for line breaks before or after binary
operators (respectively). This allows either approach (explicitly
instructing flake8 to ignore both of these cases).
fixes#9624
merge_config_rules was using `strict=False` to check if a spec
satisfies a constraint, which loosely translates to "this spec has
no conflict with the constraint, so I can potentially add it to the
spec". We want instead `strict=True` which means "the spec satisfies
the constraint right now".
* updated visit package
* make hdf5 and silo conflict with ~gui variant
* Changed parallel => mpi and quotes in description
* Corrected +mpi variant in VisIt package
The previous commit introduced a bug (+parallel variant wasn't renamed +mpi), and the +mpi variant wasn't True by default. This is corrected.
- #8773 made the default mode 0o777, which is what's documented but
mkdirp actually takes the OS default or umask by default
- revert to the Python default by default, and only set the mode when
asked explicitly.
arrow: add missing dependency for python build
The Parquet library moved into the Arrow organisation, hence add a
parquet flavor and adapt dependencies.
