Erik Schnetter
a0c0728ea8
New package polymake
2016-06-19 13:47:26 -04:00
Erik Schnetter
b4da4425ff
Add header files to lrslib install
2016-06-19 13:47:02 -04:00
Erik Schnetter
fa471a4ed1
Add missing header files to Bliss install
2016-06-19 13:46:38 -04:00
Erik Schnetter
d8b9cda632
Build Bliss both with and without GMP
2016-06-19 12:48:47 -04:00
Denis Davydov
cf4a34c657
openmpi: raise an error without Fortran compiler
2016-06-19 11:59:29 +02:00
Denis Davydov
1cc04cff27
openblas: raise an error without Fortran compiler
2016-06-19 11:59:10 +02:00
Erik Schnetter
71e92774eb
New package cddlib
2016-06-18 22:47:59 -04:00
Erik Schnetter
8fa8fc239f
New package "nauty and Traces"
2016-06-18 22:22:58 -04:00
Erik Schnetter
e5b08544ff
New package Panda
2016-06-18 22:02:36 -04:00
Erik Schnetter
2009354719
Add fourier tool to lrslib
2016-06-18 21:38:15 -04:00
Erik Schnetter
a5086f474e
New package lrslib
2016-06-18 18:03:09 -04:00
Erik Schnetter
92a7c0ddd5
Update Bliss to use -O3
2016-06-18 18:02:52 -04:00
Erik Schnetter
64aaf7ba81
New package cdd
2016-06-18 16:37:08 -04:00
Erik Schnetter
83d4cdc090
Update Bliss
2016-06-18 16:36:43 -04:00
Erik Schnetter
a07056d67b
Add Bliss package
2016-06-18 16:20:37 -04:00
Mario Melara
64c83638ff
Adding test to list of test_names
2016-06-18 11:11:46 -07:00
Mario Melara
15e6b88a8b
Adding new tests for compiler command for spack's test suite
2016-06-18 10:51:38 -07:00
Mario Melara
36275f8e6e
More clean up of init_config, also no need for a different find_compilers function.
2016-06-18 10:50:55 -07:00
Mario Melara
ccb62b4620
Getting rid of no longer used init_config arg
2016-06-18 10:49:39 -07:00
Todd Gamblin
f9efb746d7
Merge pull request #1032 from eschnett/eschnett/cc-quotes
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Add quotes around file name
2016-06-18 08:57:18 -07:00
alalazo
9e0c20c794
environment : filter the current environment
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Previously only the environment obtained after sourcing the file was filtered.
This caused the appeareance of spurious unset commands in the list.
2016-06-18 13:39:08 +02:00
alalazo
a17d1efe7c
Merge branch 'develop' of https://github.com/LLNL/spack into features/source_diffs_in_environment_modifications
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Conflicts:
lib/spack/spack/test/environment.py
2016-06-18 13:31:29 +02:00
alalazo
670669ef80
qa : fixed flake8 issues
2016-06-18 13:10:35 +02:00
alalazo
a33077b77f
unit tests : fixed test_alter_environment
2016-06-18 13:07:14 +02:00
alalazo
51cf847647
Merge branch 'develop' of https://github.com/LLNL/spack into features/module_file_explicit_load
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Conflicts:
lib/spack/spack/test/modules.py
2016-06-18 13:06:37 +02:00
Mario Melara
8af1c5fc8f
Merge remote-tracking branch 'upstream/develop' into develop
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"Updating NERSC branch"
2016-06-18 00:52:06 -07:00
Mario Melara
c703bfb54d
Got rid of init_config flag since we don't need it. Instead we update the cache config if there are any changes
2016-06-18 00:48:08 -07:00
Adam J. Stewart
652a5eb592
Allow py-pillow to link to Spack-built libraries
2016-06-17 18:09:03 -05:00
Todd Gamblin
62b2f2a7c9
Merge pull request #1065 from epfl-scitas/packages/espresso_update
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espresso : update to 5.4.0
2016-06-17 14:51:45 -07:00
Todd Gamblin
4569df025e
Merge pull request #1060 from mathstuf/no-break-long-words
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tty: do not break long words
2016-06-17 14:51:26 -07:00
Todd Gamblin
9a8d109650
Merge pull request #1044 from adamjstewart/features/sncosmo
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Add py-sncosmo package
2016-06-17 14:50:37 -07:00
Todd Gamblin
d7f48e1ff0
Merge pull request #1061 from mathstuf/reindex-preserve-explicit
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reindex: preserve 'explicit' flags
2016-06-17 14:29:47 -07:00
Todd Gamblin
0bbbfc2ef7
Merge pull request #946 from LLNL/features/intel2
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Intel software packages and license enhancements
2016-06-17 14:28:39 -07:00
Tom Scogland
8770f2a0ea
fixing last flake8 issue
2016-06-17 13:42:27 -07:00
Tom Scogland
0743ef4d0b
fixing flake8 issues
2016-06-17 13:32:28 -07:00
Tom Scogland
a4ac99877a
cmd/list: adding description search and glob by default
2016-06-17 12:00:35 -07:00
Adam J. Stewart
536fa73d5f
Python flake8 overhaul
2016-06-17 13:33:09 -05:00
Robert D. French
448f8c43d4
Added working Ferret spec
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Fixed ferret spec. It builds now
Made ferret spec more flake8-y
Fixed homepage and info text about Ferret
Removed vim swap file
Reverted changes to netcdf-fortran spec and added netcdf~mpi dependency to ferret spec to compensate for it
Fixed flake8 issues!
2016-06-17 14:23:50 -04:00
Mario Melara
fe5eec5230
'find and 'add' are options for adding compilers via command line
2016-06-17 09:16:03 -07:00
Adam J. Stewart
80d444624b
Fix activation of sites.py for sncosmo
2016-06-17 11:08:16 -05:00
Adam J. Stewart
24f65c502e
Add additional Astropy dependencies
2016-06-17 10:45:10 -05:00
Adam J. Stewart
b2aa78d6ab
Remove version constraints
2016-06-17 10:45:10 -05:00
Adam J. Stewart
4eeaff175c
Allow packages to build
2016-06-17 10:44:28 -05:00
Adam J. Stewart
a660c60eb1
Add py-sncosmo package
2016-06-17 10:43:34 -05:00
Glenn Johnson
8970785d33
Add 'jdk' as a dependency.
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Add jdk as a dependency so that R has support for java and allow
packages that need java to work.
2016-06-16 23:08:55 -05:00
Glenn Johnson
a813f03955
Add list_url for old versions.
2016-06-16 23:08:55 -05:00
Glenn Johnson
4850b9d4d1
Make install comment consistent with actual call.
2016-06-16 23:08:55 -05:00
Glenn Johnson
7da405e630
Add validator for bioconductor packages
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This commit adds a validator function to make sure the versions of R and
bioconductor are in sync.
2016-06-16 23:08:55 -05:00
Glenn Johnson
7213b12324
Tweak how R packages are built.
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Add bzip2 as a dependency to base R.
Switch from installing the R packages from tar files to installing from
the extracted directory. This is more in line with a standard install
and also allows installing from VCS.
Use the Bioconductor version for BiocGenerics and future Bioconductor
packages. Suffix the package with 'bioc-$version' to indicate which
Bioconductor release the package is a part of. This is actually more
important than the actual version attached to individual packages
although those are subject to change within the Bioconductor branch.
2016-06-16 23:08:55 -05:00
Glenn Johnson
0e64c25ffc
Fix flake8 errors
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Use Bioconductor provided Short URL for homepage in BiocGenerics.
Wrap description text for utf variant in pcre.
2016-06-16 23:08:54 -05:00
