Commit graph

2790 commits

Author SHA1 Message Date
Zack Galbreath
49e37a5ecf Add test case for CDash reporting 2018-05-15 05:43:07 -07:00
Zack Galbreath
218331552c upload reports to CDash 2018-05-15 05:43:07 -07:00
Zack Galbreath
847c1216d0 Generate CDash reports for build/install step 2018-05-15 05:43:07 -07:00
Zack Galbreath
ae0ba373b8 CDash report for concretization errors
Capture any concretization errors and record them in a CTest Update.xml file.
2018-05-15 05:43:07 -07:00
Zack Galbreath
d7581697a5 CDash report for configure step
Generate CTest XML file containing configure output
2018-05-15 05:43:07 -07:00
Zack Galbreath
f35d5bbf2b Capture source line number in CTest log parser 2018-05-15 05:43:07 -07:00
Zack Galbreath
d174d6618f Fix typo in comment 2018-05-15 05:43:07 -07:00
Zack Galbreath
072f907831 Add CDash as a valid reporting format 2018-05-15 05:43:07 -07:00
Zack Galbreath
e4e8c72fa1 Initialize report generator before parsing specs
This will allow us to generate reports for concretization errors
2018-05-15 05:43:07 -07:00
Zack Galbreath
de01d70ae4 Allow --overwrite and --log-format to be used together
Restructure the logic of the spack install command to allow these two
command-line arguments to be used at the same time.
2018-05-15 05:43:07 -07:00
Zack Galbreath
6c5dbdd9cd Format-agnostic data structure for reports
Replace the JUnit-specific terms 'testsuite' and 'testcase' with
'spec' and 'package', respectively.
2018-05-15 05:43:07 -07:00
Massimiliano Culpo
b4859e10e2 Packages can tune the list of files to be archived at the end of install (#7760)
Fixes #2781

This PR introduces a new attribute for packages called
`archive_files`, which designates files that should be saved from
a package build (e.g. the config.log generated during autotools
builds).

The attribute contains a list of glob expressions; Any file that
matches will be archived in the `<prefix>/.spack/archived-files`
directory. Errors that occur when archiving files are collected and
reported in a file named `<prefix>/.spack/archived-files/errors.txt`.

`AutotoolsPackage` and `CMakePackage` provide a sensible default
override for this attribute.
2018-05-08 17:40:53 -07:00
Massimiliano Culpo
ff3205d21e
Specs add a space before dependencies (#7942)
fixes #7941

Modified string representation of Specs to add a space before deps
Unit-tests have been modified accordingly
Added a test for regression on #7941
2018-05-07 09:05:50 +02:00
健美猫
c451644f12 Support *.TAR.gz extension. (#7973) 2018-05-06 09:34:16 -05:00
Adam J. Stewart
3a29cc3f5c
Fix coloring of URLs containing @ symbol (#7799)
* Fix coloring of URLs containing @ symbol

* Fix coloring of descriptions containing @ symbol
2018-05-05 17:27:40 -05:00
Adam J. Stewart
5af4d4f0ac
Set default provider for every virtual package (#7784)
* Set default provider for every virtual package

* Add unit test to ensure that every virtual package has a default provider explicitly set
2018-05-05 17:26:47 -05:00
scheibelp
d17372290d
Fix initialization of defaults in yaml schema validation (#7959)
Fixes #7924

Spack's yaml schema validator was initializing all instances of
unspecified properties with the same object, so that updating the
property for one entry was updating it for others (e.g. updating
versions for one package would update it for other packages).

This updates the schema validator to instantiate defaults with
separate object instances and adds a test to confirm this behavior
(and also confirms #7924 without this change).
2018-05-01 17:23:27 -07:00
Adam J. Stewart
c1febf8d9c Document how to run unit tests with print statements (#7860) 2018-04-28 17:59:33 +02:00
Chris Green
6cc79f8142 Allow len(Version) to return number of split components. (#7918) 2018-04-26 15:38:43 -07:00
serbanmaerean
963c103a67 XL Fortran compiler >= 16.0 is synced with C compiler version (#7887)
* Use reported version of IBM XL Fortran compiler for compiler versions >= 16.0.

Starting with the April 2018 release, the IBM XL C and Fortran compilers report the same version, 16.0.  Consequently, there is no need to downgrade the Fortran compiler version to match that of the C compiler.
2018-04-26 14:50:14 -07:00
Sergey Kosukhin
0f35f00b6e Use GitLab's API endpoint for fetching a git snapshot. (#7881)
* Use GitLab's API endpoint for fetching a git snapshot.

* More GitLab packages use the API.

* find_list_url for GitLab's API URLs.

* Flake8

* Url for 'hacckernels'.

* Check GitLab API regexps before the non-API ones.
2018-04-26 16:40:11 -05:00
健美猫
9dad069e89 config_args does NOT apply to CMakePackage. (#7917) 2018-04-26 13:03:45 -05:00
Matthew Scott Krafczyk
1b38631781 Add -d option to diy to specify source path move -j to common args (#5963) 2018-04-18 17:26:14 -05:00
Elizabeth Fischer
d3c1463b0a Fix bug/oversight in formatting error message. (#7810) 2018-04-18 15:05:37 -05:00
George Hartzell
669b85e6bc Activation of activated package just msg's (#7752)
Activating a package that is already activated now sends a `tty.msg`
and returns.

```
-bash-4.2$ ~/spack/bin/spack activate aspell6-en
==> Package aspell6-en/lc4v24f is already activated.
```
2018-04-17 07:44:08 -05:00
Massimiliano Culpo
4bf7ce7d99 Better error message for spack providers (#7748)
* Better error message for spack providers

fixes #1355

`spack providers` now outputs a sensible error message if non-virtual
specs are provided as arguments:
```
$ spack providers mpi zlib petsc
==> Error: non-virtual specs cannot be part of the query [zlib, petsc]
```

Formatting of the output changed slightly.

* Calling 'spack providers' without arguments print the virtual pkg list

Also, the error message in case of a wrong parameter has been improved
to show the list of valid packages.

* Avoid printing headers if stdout is not a tty

* The provider list is formatted with colify if not in a tty

* Added a test to check the list of providers returned from the command
2018-04-17 07:30:32 -05:00
Cameron Smith
e6d3ab8405 cray: add comment about module use in packages.yaml (#7751)
This advises users to prefer `modules:` entries in `packages.yaml` on Cray.
2018-04-13 11:53:26 -07:00
becker33
b9c8cdcbe3
Fix when_spec inheritance for extensions (#7746)
Popping the when spec from kwargs in the extends directive breaks
class inheritance. Inheriting classes do not find their when spec.

We now get the when spec from kwargs instead, leaving it to be found
by any downstream package classes.
2018-04-13 11:38:34 -07:00
Massimiliano Culpo
1307ad3979
Package.provides account for v deps that are provided conditionally (#7716)
fixes #7705

Package.provides now checks constraints to ensure that a spec provides
a given virtual package. Note that 'strict=True' is not passed to
satisfies as this function is also used during concretization.
2018-04-11 21:50:03 +02:00
healther
6a0f9ccf82 make view understand hashes (#7573)
Fixes #7548

This updates the "spack view" command to use the same parsing logic
as "spack install" on the user-provided specs. For example you can
provide a DAG hash to refer to an exact installed spec instead of
specifying name, compiler, etc.
2018-04-04 10:40:56 -07:00
Adam J. Stewart
c50628ebdf Fix bug in test_find_with_globbing unit test (#7652) 2018-04-03 22:27:17 -07:00
Zack Galbreath
f613437a44 Do not call sys.exit() in except block (#7659)
When an invalid spec is encountered by `parse_specs()` we now raise a
`SpackError` instead of calling `sys.exit()`
2018-04-03 22:22:28 -07:00
Adam J. Stewart
cdefbd7475 Avoid double 'lib' for packages whose name already starts with lib (#7651) 2018-03-31 17:33:41 +02:00
Axel Huebl
4c6199923e mirrors.yaml: does not expand ~ (#7631)
Use `$HOME` for cli commands in `mirrors.yaml` and add
"username" example strings in the file itself.
2018-03-28 14:30:18 -05:00
Patrick Gartung
52d55ea317 Fix buildcache relocate: only skip if rpaths are relative (#7605)
This fixes a check that decides when to skip buildcache relocation.
Originally the check was flawed in two ways: it would skip if the
source prefix matched the destination prefix, which no longer
matters since the source prefix is replaced with a placeholder
(so it always needs to be updated); it also would skip relocation
if the rpaths were not relative, when in fact it should be the
opposite (binaries without relative rpaths *should* be relocated,
and those without don't need it).
2018-03-27 10:54:26 -07:00
Todd Gamblin
54f97d1dec
Update copyright on LLNL files for 2018. (#7592) 2018-03-24 12:13:52 -07:00
Todd Gamblin
af0f94a1af
Avoid stat-ing all packages at startup. (#7587)
- FastPackageChecker was being called at startup every time Spack runs,
  which takes a long time on networked filesystems.  Startup was taking
  5-7 seconds due to this call.

- The checker was intended to avaoid importing all packages (which is
  really expensive) when all it needs is to stat them.  So it's only
  "fast" for parts of the code that *need* it.

- This commit makes repositories instantiate the checker lazily, so it's
  only constructed when needed.
2018-03-24 07:39:10 -07:00
Todd Gamblin
998b5a6482
Remove case consistency check at startup. (#7585)
- This was needed when we transitioned to all lowercase packages because
  git didn't handle case changes well on case-insensitive filesystems.

- Now it just adds extra stat calls to startup, and we check for
  all-lowercase package names in tests, so we'll remove it.

- people using really old versions of Spack can re-clone.
2018-03-23 22:38:31 -07:00
Mario Melara
385622953d Cray clean environment (#7582)
* Create unload_module method

Extract code from load_module into unload_module.

* Unload modules to create a clean env on Cray

removes cray-libsci, cray-mpich and darshan to prevent any silent
linking with those packages.
2018-03-23 14:53:52 -07:00
Adam J. Stewart
666e8e3a9b Increment Spack version (#7565) 2018-03-23 14:43:22 -07:00
becker33
1c169ead8b
Grab crayos version from PrgEnv module versions (#7583) 2018-03-23 14:41:43 -07:00
Mario Melara
2970a50ef6 Add the ability to separate architecture in path scheme (#4329)
* Add format to separate target and os for path

spec format can now handle separations of target and os for setting
up the path.

* Added ${PLATFORM} et al to spec.format()

${PLATFORM}, ${OS}, ${TARGET}

* Update tests

Updated tests and got rid of unnecessary code.

* Also update documentation to reflect this new ability.

* Add default path scheme to config.yaml

Added default path scheme to config.yaml. Users can overwrite this
section if they want.
2018-03-23 12:05:07 -07:00
Veselin Dobrev
4ddbc96c7b Speedup the default 'libs' property search ... (#7553)
* Speedup the default 'libs' property search - important for external
packages.

* As advised by @alalazo, use tuples instead of lists inside
_libs_default_handler.
2018-03-22 20:04:28 -05:00
Adam J. Stewart
f721fb3e4c
Fix error raising during install with Python 3 (#6894)
* Fix error raising during install with Python 3

* Fix env_path too
2018-03-22 19:37:49 -05:00
Massimiliano Culpo
5655895865 Record installation date and time in DB (#7334)
* Added installation date and time to the database

Information on the date and time of installation of a spec is recorded
into the database. The information is retained on reindexing.

* Expose the possibility to query for installation date

The DB can now be queried for specs that have been installed in a given
time window. This query possibility is exposed to command line via two
new options of the `find` command.

* Extended docstring for Database._add

* Use timestamps since the epoch instead of formatted date in the DB

* Allow 'pretty date' formats from command line

* Substituted kwargs with explicit arguments

* Simplified regex for pretty date strings. Added unit tests.
2018-03-22 11:07:27 -07:00
Massimiliano Culpo
6699ba8769 Recover the old patching order for packages. (#7558)
fixes #7543

This is very likely an hot-fix, while a more permanent solution is
needed. See this comment for more insight:

 https://github.com/spack/spack/pull/7193#discussion_r176448831

on the problem.
2018-03-22 10:09:43 -07:00
becker33
f8657e3fd9 Propagate architecture information during concretization (#7412)
This updates architecture concretization to

* Search for the nearest parent in the DAG for architecture information
  rather than defaulting to the root of the DAG
* Propagate architecture settings transitively, such that if for
  example the target is set at the root of the dag it will set the
  same target on indirect dependencies (assuming no intermediate
  dependency specifies a separate target). Previously this occurred
  in general but under some conditions did not, for example if an
  intermediate dependency specified some subset of architecture
  properties.
2018-03-21 18:14:01 -07:00
scheibelp
6548f2db5c Enable creation of mirrors for systems with different compilers (#5153)
* Create mirror for system with different compilers

Spack concretizes the spec provided by the user in
"spack mirror create" to ensure downloading the right
dependencies. Under normal circumstances concretization
requires that the chosen compiler exists on the system,
but this is not required when creating download mirrors
for other systems, so this requirement is removed in that
case.

* Add test for disabling compiler existence check

* Update compiler existence checking logic

* improve test for disabling compiler existence check
2018-03-21 14:55:26 -07:00
健美猫
71055a8ef4 Generate spack docset for Dash. (#6981) 2018-03-21 16:37:26 -05:00
Gregory Lee
7504e9997d make py-setuptools a run-time-only dep for py-basemap and patch pytho… (#6989)
* make py-setuptools a run-time-only dep for py-basemap and patch python package to only apply setuptools flag for build deps

* py-qtconsole does not require setuptools
2018-03-21 16:34:27 -05:00