Commit graph

12542 commits

Author SHA1 Message Date
Hadrien G
d24532f574
acts: added v0.32 and adapt to latest master changes (#18563) 2020-09-09 09:44:44 +02:00
Adam J. Stewart
346d12dc6c
Pandas: added v1.1.2 (#18580) 2020-09-09 09:32:56 +02:00
t-nojiri
d11705f9d0
r-ff: support for aarch64 (#18585) 2020-09-09 09:01:51 +02:00
darmac
e3cd3fb9eb
Add new package: quartz (#18539) 2020-09-08 21:29:26 -05:00
Martin Aumüller
ab51edecb5
openscenegraph: remove dependency on Qt for newer versions (#18531)
Starting with OpenSceneGraph 3.5.5, support for windows managed by Qt
has been moved to the seperate project osgQt. Hence, a dependency on Qt
is not needed any longer for version 3.5.5 or newer.
In order to still satisfy the dependency on OpenGL, a depends_on('gl')
has been added.
2020-09-08 21:28:27 -05:00
darmac
b1cea5c23e
Add new package: kylin (#18537)
Co-authored-by: root <root@localhost.localdomain>
2020-09-08 21:27:01 -05:00
darmac
275ac86925
Add new package: sqlite-jdbc (#18540) 2020-09-08 21:26:11 -05:00
darmac
0f4f4a2e95
Add new package: orientdb (#18542) 2020-09-08 21:21:35 -05:00
darmac
97b7af01d9
Add new package: nacos (#18543) 2020-09-08 21:20:41 -05:00
darmac
0325cb564b
Add new package: fastjson (#18545) 2020-09-08 21:17:19 -05:00
darmac
a0ba89d84a
Add new package: guacamole-client (#18546) 2020-09-08 21:15:52 -05:00
darmac
a12ced781c
Add new package: jansi-native (#18547) 2020-09-08 21:14:49 -05:00
darmac
fe05fc7fd5
Add new package: jline3 (#18548) 2020-09-08 21:14:00 -05:00
darmac
1ac24aca96
refine efivar install flow (#18557) 2020-09-08 21:08:38 -05:00
Jaroslav Hron
e2e90e4d6b
Update package.py (#18552)
without setting the build enviroment, the installation fails with

```
1 error found in build log:
     35946    fmtutil [INFO]: /usr/local/pkg/Installs/linux-ubuntu18.04-skylake_avx512/gcc7.4.0/texlive/20190410/rgs2nakycorkgzno/t
              exmf-var/web2c/pdftex/pdfcslatex.fmt installed.
     35947    fmtutil [INFO]: Disabled formats: 6
     35948    fmtutil [INFO]: Successfully rebuilt formats: 45
     35949    fmtutil [INFO]: Total formats: 51
     35950    fmtutil [INFO]: exiting with status 0
     35951    ==> [2020-09-07-21:23:21.482745] '/usr/local/pkg/Installs/linux-ubuntu18.04-skylake_avx512/gcc7.4.0/texlive/20190410/
              rgs2nakycorkgzno/bin/x86_64-linux/mtxrun' '--generate'
  >> 35952    /usr/bin/env: 'texlua': No such file or directory
```

May be there is a better way...
2020-09-08 21:05:18 -05:00
Garth N. Wells
af189e3ed9
Fix linking problem on macos (#18564) 2020-09-08 21:01:21 -05:00
Andrew W Elble
520308ad2b
astra: update checksum, add other executables (#18567) 2020-09-08 21:00:27 -05:00
Tom Payerle
7165795c4a
libxmms: add python build dependency (#18566) (#18568)
Build of libxmms requires python, but not in spack dependency list.
See  #18566
2020-09-08 20:59:22 -05:00
Michael Kuhn
017331684e
go: Add 1.15.1 and 1.14.8 (#18575) 2020-09-08 20:56:08 -05:00
Michael Kuhn
e43855bc8f
node-js: Add 14.10.0 and 12.18.3 (#18576) 2020-09-08 20:55:40 -05:00
Michael Kuhn
9c4d79f8cd
npm: Add 6.14.8 (#18577) 2020-09-08 20:55:12 -05:00
Adam J. Stewart
2f4d493744
Cython: add setuptools run-dependency (#18572)
Cython requires a library that is available in Python 3.8, or before
Python 3.8 with setuptools. This specifies that setuptools is a run
dependency to allow running with Python < 3.8
2020-09-08 17:27:49 -07:00
Tamara Dahlgren
6b30cd18d6
Update cray-libsci homepage and install error (#18581) 2020-09-08 16:22:25 -06:00
Michal Sudwoj
7205a75427
Added nvptx variant to rust (#18209)
Co-authored-by: Andrew Gaspar <andrew.gaspar@outlook.com>

Co-authored-by: Andrew Gaspar <andrew.gaspar@outlook.com>
2020-09-08 11:28:59 -05:00
Gvozden Neskovic
c2b33b4444
gromacs: add zen2 target SIMD optimizations (#18551)
Co-authored-by: Gvozden Nešković <neskovic@dev06.compeng.uni-frankfurt.de>
2020-09-08 06:52:56 -06:00
Piotr Luszczek
73110b415d
hpcc: add explicit C99 flag for older GCC versions (#18556) 2020-09-08 08:30:02 +02:00
Mark W. Krentel
850924e423
hpctoolkit: adjust some dependencies (#18558)
Hpctoolkit master and upcoming releases now want the +pic variant for
two dependencies, libunwind and xz.
2020-09-08 08:27:39 +02:00
Axel Huebl
64273da2cc
openPMD-api: added v0.12.0 (#18560) 2020-09-08 08:18:21 +02:00
jthies
dcee0a1d5d
phist: added v1.9.1 (#18529) 2020-09-07 17:52:07 +02:00
ketsubouchi
03a808ec2d
kim-api: add support for Fujitsu compilers (#18533) 2020-09-07 17:47:55 +02:00
Andre Sailer
138e2ad0a1
[LCIO]: changes to install/CPATH for python bindings (#18512) 2020-09-07 10:16:16 -05:00
darmac
b2b7bcd86a
Add new package: kbd (#18436)
* Add new package: kbd

* fix description error
2020-09-07 10:12:47 -05:00
Tim Haines
8b7ca5ef50
capstone: added v4.0.2 (#18534)
This also adds the git branches "master" and "next".
2020-09-07 16:04:23 +02:00
darmac
5e86a131d2
jansi: added new package at v1.18 (#18549) 2020-09-07 16:02:18 +02:00
ketsubouchi
80691fa6d5
gconf: add dependencies (#18406)
* gconf: add dependencies

* gconf: add run type to perl-xml-parser
2020-09-06 22:33:42 -05:00
Andrew W Elble
8ad581e7b3
new package: py-textblob (#18516)
* new package: py-textblob

add variant to py-nltk to allow for data download/installation
add dependencies to py-nltk so that bin/nltk works

* add resources and resource generation script
2020-09-05 11:50:03 -05:00
Satish Balay
b494f50489
petsc4py: repo is migrated from bitbucket to gitlab (#18519) 2020-09-05 10:18:48 -05:00
Massimiliano Culpo
ba257914b3
fujitsu: added new package (#18021)
The package is at the moment not installable, just detectable.

Co-authored-by: Toyohisa Kameyama <kameyama@riken.jp>
2020-09-05 10:40:52 +02:00
Ganesh Kumar
704fc475e3
ROCm3.5 miopen recipe (#18442)
* ROCm 3.5 miopen recipe

* fixing flake8 issues

* cmake variant fix

* min support fix

* variant possible values
2020-09-04 17:02:33 -05:00
Nick Booher
61ae21ee4d
energyplus: add version 9.1 (#18485) 2020-09-04 16:13:53 -05:00
mic84
c5e50b73ef
amrex:: new version 20.09 (#18486) 2020-09-04 16:13:20 -05:00
Tom Payerle
2cc7718edd
bml: Add build dependency on python (#18489) (#18491)
At some point in the build phase a script
spack-src/scripts/convert-template
has a shebang looking for python in the path.

Currently this picks up system python if in invoker's path, but should
be using python from spack, so add a build dependency on python.
2020-09-04 16:12:53 -05:00
Michael Kuhn
518372ccd1
mariadb-c-client: Add 3.1.9 (#18501) 2020-09-04 16:03:43 -05:00
Michael Kuhn
ca2760381b
py-setuptools: Add 50.1.0 and 49.6.0 (#18502) 2020-09-04 16:03:20 -05:00
Michael Kuhn
f836d93da1
rocksdb: Add 6.11.4 (#18503) 2020-09-04 16:01:30 -05:00
Michael Kuhn
f2adf531b3
glib: Add 2.64.5 (#18505) 2020-09-04 16:00:07 -05:00
Michael Kuhn
262edde2c1
libbson, mongo-c-driver: Add 1.17.0 (#18506) 2020-09-04 15:59:43 -05:00
Michael Kuhn
14983401a1
libidn2: Add 2.3.0 (#18507) 2020-09-04 15:59:16 -05:00
Michael Kuhn
972caba882
curl: Add 7.72.0 (#18508) 2020-09-04 15:58:52 -05:00
Michael Kuhn
53bf97298f
gettext: Add 0.21 (#18509) 2020-09-04 15:58:30 -05:00
iarspider
0c03248537
Add madgraph 2.8.0; fix recipe (#18510) 2020-09-04 15:58:04 -05:00
Luke Dalessandro
8e41208c65
Build libtinfo.so "--with-versioned-syms" when it is enabled in ncurses. (#18511)
Many system-installed binaries (at least in Debian) are built against a
libtinfo.so that has versioned symbols. If spack builds a version without this
functionality, and it winds up in the user's LD_LIBRARY_PATH via spack load,
system binaries will begin to complain.

```
$ less log.txt
less: /opt/spack/.../libtinfo.so.6: no version information available (required by less)
```

Co-authored-by: Luke D'Alessandro <ldalessa@uw.edu>
2020-09-04 15:54:44 -05:00
Andrew W Elble
f4d3a1a0cb
new package: py-markovify (#18517) 2020-09-04 15:46:38 -05:00
t-nojiri
f3c4747318
fermikit: added support for aarch64 (#18480) 2020-09-04 19:52:10 +02:00
Adam J. Stewart
6fcec1dcff
Python: default to Python 3.8 (#17798) 2020-09-03 16:15:43 -07:00
Adam J. Stewart
0eca977cc9
py-pillow-simd: fix concretization (#18490) 2020-09-03 15:36:20 -07:00
Adam J. Stewart
7d9f2bf4ed
depends_on cannot handle ^ sigil (#18220)
* depends_on cannot handle ^ sigil

* cardioid+mfem+cuda requires hypre+cuda

* Document this limitation

* Move warning message to Known Issues docs

* Better handling of parmetis dep
2020-09-03 17:31:00 -05:00
Adam J. Stewart
7728b0737b
Add new MavenPackage build system base class (#18185)
* Add new MavenPackage build system base class

* Fix flake8 and doc tests

* More specific regex

* Java 8 required for these packages
2020-09-03 17:30:39 -05:00
Adam J. Stewart
741bb9bafe
install/install_tree: glob support (#18376)
* install/install_tree: glob support

* Add unit tests

* Update existing packages

* Raise error if glob finds no files, document function raises
2020-09-03 10:47:19 -07:00
Adam J. Stewart
098beee295
Pillow-SIMD: use as default PIL provider (#18097)
* Pillow-SIMD: use as default PIL provider

* Fix concretization of pil

* Fix build of older versions of pillow
2020-09-03 10:39:35 -07:00
Michael Kuhn
8c264a9f26
freetype: Add custom headers property (#18440)
freetype's headers are installed in the `freetype2` subdirectory, use a
custom headers property to fix this in dependent packages.
2020-09-03 11:32:41 -05:00
t-nojiri
3a562c0cec
fermi: added patch to support aarch64 (#18479) 2020-09-03 10:06:15 +02:00
psakievich
7c0b356e79
Add test tolerance variant to nalu-wind pkg (#18455)
* Add test tolerance variant to nalu-wind pkg

* flake8 fixes
2020-09-02 20:31:58 -05:00
Gabriel Rockefeller
ced0a8f068
eospac: add version 6.4.1 (#18476) 2020-09-02 20:28:48 -05:00
Andrew W Elble
879bb063f7
new package: corenlp (#18467)
* new package: corenlp

* import os, not os.path
2020-09-02 20:27:56 -05:00
Robert Blake
638f44d842
CUDA_HOME needs to be set, or CUDA is found based on user's PATH. (#18475) 2020-09-02 19:52:00 -05:00
Harmen Stoppels
6d87cbdb52
Add rocm 3.7.0 libs (#18366)
* Add rocm 3.7.0 libs

* Make 3.7.0-only dependency on numactl explicit

* Add rocm-device-libs dep to rocm-clang-ocl

* Update the cmakelists dir in rocm-debug-agant

* Make rocm-debug-agent work on 3.7.0

* Disable tensile host; following rocm-arch recommendations
2020-09-02 19:50:05 -05:00
Adam J. Stewart
443407cda5
Add new RubyPackage build system base class (#18199)
* Add new RubyPackage build system base class

* Ruby: add spack external find support

* Add build tests for RubyPackage
2020-09-02 16:26:36 -07:00
Chris White
e22a0ca5cf
mfem: fix transitive hdf5 static libs (#18457) 2020-09-02 15:06:45 -07:00
Adam J. Stewart
6b20687b26
python: switch to +uuid by default (#18252) 2020-09-02 14:46:58 -07:00
Jose E. Roman
601f97d8a5
New patch release SLEPc 3.13.4 (#18466) 2020-09-02 15:24:07 -05:00
Rémi Lacroix
447ea50bf9
Aria2: Add version 1.35.0. (#18465) 2020-09-02 15:23:40 -05:00
Adam J. Stewart
ba317b01c3
Packages: headers should be lists (#18445) 2020-09-02 13:19:22 -07:00
Nick Booher
0116c44714
ldak: new package at 5.1 (#18431)
* ldak: new package at 5.1

* flake8

* Re-run tests

* Apply suggestions from code review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-02 11:29:40 -05:00
Auriane R
24843844ae
Add HPX 1.5.0 release and update the homepage (#18464) 2020-09-02 10:34:05 -05:00
Sinan
e5fdb2a46c
new package: py-python-fmask (#18382)
* new package: py-python-fmask

* flake8

* add missing dependency

Co-authored-by: sbulut <sbulut@3vgeomatics.com>
Co-authored-by: Sinan81 <Sinan81@earth>
2020-09-02 10:29:02 -05:00
Sinan
712e7bd2bf
new package: py-gitdb (#18386)
* new package: py-gitdb

* Update var/spack/repos/builtin/packages/py-gitdb/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

Co-authored-by: sbulut <sbulut@3vgeomatics.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-02 10:28:33 -05:00
Jordan Moxon
aa8e046073
Add blaze versions 3.6-3.8 (#18424) 2020-09-02 10:15:38 -05:00
darmac
f268f65733
Add new package: rasdaemon (#18434) 2020-09-02 10:08:34 -05:00
Gvozden Neskovic
1e05321c8f
gromacs: add support for opencl build (#18461)
Co-authored-by: Gvozden Nešković <neskovic@dev06.compeng.uni-frankfurt.de>
2020-09-02 09:07:43 -06:00
Seth R. Johnson
d904c57d2b
Flibcpp: update version (#18448)
Update available versions and add Fortran check
2020-09-02 11:07:10 -04:00
Paul
1b78a010d8
Updated Hugo package. (#18443)
* Set GOPATH in build environment to avoid creating files in the user's
default GOPATH (e.g. ~/go).
* Support for external find.
* Added latest releease 0.74.3.
2020-09-02 10:03:56 -05:00
ketsubouchi
1026ace6b6
r-boot: checksum mismatch @1.3-23 (#18458) 2020-09-02 10:00:12 -05:00
Weston Ortiz
bf2ded5269
Add gdb TUI variant (#18459) 2020-09-02 09:59:19 -05:00
Mark Olesen
5c94827201
scotch: update to 6.0.10 (released 31-AUG-2020) (#18462)
- added gitlab location, updated the homepage location

Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2020-09-02 09:57:48 -05:00
Seth R. Johnson
9e51b8d165
New package: ForTrilinos (#18456)
Remove prior built-in Trilinos subrepository.

Added a Trilinos conflict discovered while documenting ForTrilinos:
```
   ***
   *** ERROR: Setting Trilinos_ENABLE_SEACASExodus=OFF which was 'ON' because SEACASExodus has a required library dependence on disabled TPL Netcdf!
   ***
```
2020-09-02 08:14:20 -04:00
Axel Huebl
0740a4ac7e
ADIOS: Fix no-MPI Build (#18453)
Do not apply this patch in no-MPI builds. I think this autotools
check logic is generally borked, this will just set it manually to
on/off now.
2020-09-01 18:17:51 -07:00
t-nojiri
ae3f3887a6
ccs-qcd: Change compile option for aarch64 (#17516)
* ccs-qcd: Change compile option for aarch64
2020-09-01 18:03:47 -07:00
Rao Garimella
ea97b37f60
Jali: Fix bugs in CMake section (#18447)
Fix variant name and cmake variable.

Co-authored-by: Rao Garimella <rao@abyzou.lanl.gov>
2020-09-01 15:18:24 -04:00
Jen Herting
e7f1eeb7af
Update dependencies: py-torch-geometric (#18265)
* [py-torch-geometric] depends on py-torch-sparse

* [py-torch-geometric] setting TORCH_CUDA_ARCH_LIST

* [py-torch-geometric] added the rest of the dependencies

* [py-torch-geometric] added cuda variant and added more build env vars

* [py-torch-geometric] added variant info for depenedencies

* [py-torch-geometric] flake8

* [py-torch-geometric] add variant description
2020-09-01 13:44:12 -05:00
darmac
f9a330ae99
Add new package: efivar (#18392) 2020-09-01 10:09:59 -05:00
Nikolay Simakov
12078382b6
Added HPC Challenge Benchmark (#18323)
* HPCC Benchmark: added HPC Challenge (HPCC) benchmark

* HPCC Benchmark: modified error message on lack of fftw2 interface in MKL

* hpcc: fixed styling add one more installation example

* hpcc: styling fix

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* hpcc: changed include and lib location setter

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* hpcc: fixed styling add one more installation example

* hpcc: removed readme.md

* hpcc: develop repo now is in github

* hpcc: march arguments are set explicitly in case of intel compilers, added -restrict flag, which needed for older intel compilers (at least <=19.0.5.281)

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-01 09:59:06 -05:00
ketsubouchi
3a5746c6c7
orbit2: new package at v2.14.19 (#18405) 2020-09-01 13:11:55 +02:00
darmac
3701633937
fuse-overlayfs: added new package at v1.1.2 (#18435) 2020-09-01 08:28:27 +02:00
Joseph Wang
ebeb8fb8df
ocaml: allow v4.08 and v4.09 to build with gcc10 (#18254)
fixes #18228.  

This patch doesn't cover all old versions but it allows packages like whizard to build.
2020-09-01 05:53:13 +02:00
Sinan
1c67a304c8
py-tpot: added new package at v0.11.5 (#18385)
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
Co-authored-by: Sinan81 <Sinan81@earth>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-01 05:51:23 +02:00
Xavier Delaruelle
efff025787
environment-modules: added v4.5.3 (#18425) 2020-09-01 05:46:13 +02:00
Brian Van Essen
28ef5c0e27
dihydrogen, hydrogen: dependency on CUB is conditional on CUDA version (#18427)
In CUDA 11, CUB is integrated into the CUDA library.
2020-09-01 05:42:21 +02:00
Tim Haines
7926f84022
elfutils: add support for debuginfod (#18227) 2020-09-01 05:35:18 +02:00
Jeffrey Salmond
9b6c2e80fe
py-llvmlite: added v0.34 (#18432) 2020-09-01 05:33:27 +02:00