Commit graph

30723 commits

Author SHA1 Message Date
Harmen Stoppels
381c0af988
Revert "move depfile logic into its own module, separate traversal logic from model (#36911)" (#36985)
This reverts commit a676f706a8.
2023-04-17 20:58:38 +02:00
Paul Kuberry
4519b42214
xyce: patch issue affecting MPICH (#36826) 2023-04-17 10:19:08 -07:00
Rémi Lacroix
8e50c08b3f
Add NetCDF95 package. (#36959)
* Add NetCDF95 package.
  NetCDF95 is an alternative Fortran interface to the NetCDF library which uses Fortran   2003 features.
* [@spackbot] updating style on behalf of RemiLacroix-IDRIS

---------

Co-authored-by: RemiLacroix-IDRIS <RemiLacroix-IDRIS@users.noreply.github.com>
2023-04-17 10:02:54 -07:00
Tim Haines
121ef695e3
Boost: add version 1.82.0 (#36924) 2023-04-17 18:35:45 +02:00
Sergey Kosukhin
275bfc15b4
netcdf-c: major refactoring, new variants and versions (#36485) 2023-04-17 17:59:10 +02:00
Adam J. Stewart
036695ac94
CI: update Linux images in ML pipelines (#36766)
Add missing openssl/curl/pkgconfig deps to py-tokenizers

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2023-04-17 17:42:03 +02:00
Alec Scott
19b55d6b27
r-rstantools: add v2.3.1 (#36890) 2023-04-17 08:53:06 -05:00
Alec Scott
993303f840
r-r-utils: add v2.12.2 (#36884) 2023-04-17 08:29:41 -05:00
Harmen Stoppels
a676f706a8
move depfile logic into its own module, separate traversal logic from model (#36911) 2023-04-17 15:27:01 +02:00
Alec Scott
2081ab8be1
cgl: add v0.60.7 (#36940) 2023-04-17 15:07:34 +02:00
Alec Scott
f2efec7fcc
masurca: add v4.1.0 (#36942) 2023-04-17 15:07:17 +02:00
Alec Scott
e7b549216c
spot: add v2.11.4 (#36943) 2023-04-17 15:06:56 +02:00
Alec Scott
426570fc3f
glab: add v1.28.0 (#36946) 2023-04-17 15:06:32 +02:00
Carlos Bederián
0e55055394
plumed: add 2.8.2, 2.7.6 and their supported gromacs combinations (#36929)
* plumed: Add 2.8.2, 2.7.6

* gromacs: add plumed 2.8.2 and 2.7.6 support
2023-04-17 15:05:31 +02:00
Alec Scott
1bbeb61668
slang: add v2.3.3 (#36952) 2023-04-17 15:04:57 +02:00
Alec Scott
376d87619b
transdecoder: add v5.7.0 (#36953) 2023-04-17 15:04:41 +02:00
Alec Scott
f82b4a68b8
Add "build" stage to many Go packages (#36795) 2023-04-17 15:03:09 +02:00
Adam J. Stewart
abb236e98a
py-lightly: py-torch+distributed required (#36955) 2023-04-17 15:02:13 +02:00
Adam J. Stewart
adf0ce6621
py-sphinx: add new versions (#36938) 2023-04-17 15:01:32 +02:00
Alec Scott
5368049128
ruby-rake: add v13.0.6 (#36945) 2023-04-17 15:00:39 +02:00
Alec Scott
8afa166edf
hepmc3: add v3.2.6 (#36941) 2023-04-17 15:00:22 +02:00
Taillefumier Mathieu
79a1b3bc12
Add umpire support to SIRIUS (#36958) 2023-04-17 08:53:11 -04:00
Glenn Johnson
4b6ab53a10
Add dependency changes to R packages (#36937)
This PR adds dependency changes that were missed with some recent merges
of R package updates.
2023-04-17 09:50:46 +02:00
Harmen Stoppels
58f389779a
rust: depend on curl+nghttp2 (#36947) 2023-04-16 21:50:37 -05:00
Wouter Deconinck
508cad0bbc
apptainer: new versions 1.1.6, 1.1.7 (#36838)
* apptainer: new versions 1.0.6, 1.0.7

No changes to build system required. https://github.com/apptainer/apptainer/compare/v1.1.5...v1.1.7

* apptainer: rm hanging chad
2023-04-16 18:51:06 -07:00
Juan Miguel Carceller
d22fa1be19
Change extend to append (#36939)
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-04-16 18:40:48 -07:00
Wouter Deconinck
77830d92bd
libmypaint: change extend to append (#36957)
* libmypaint: change extend to append

For same reason as #36939, `extend` takes a list as argument, while `append` takes list entry. Here `append` should be used.

* libmypaint: depends_on intltool
2023-04-16 18:37:48 -07:00
Alec Scott
14075f9f4c
r-jsonlite: add v1.8.4 (#36872) 2023-04-15 22:02:50 -04:00
Alec Scott
fc58f5d174
r-progressr: add v0.13.0 (#36881) 2023-04-15 21:57:48 -04:00
Alec Scott
25ba8702c7
r-hoardr: add v0.5.3 (#36869) 2023-04-15 21:37:42 -04:00
Alec Scott
b064f9d1e0
r-sn: add v2.1.1 (#36891) 2023-04-15 13:09:25 -05:00
Alec Scott
d43690a91b
r-rstan: add v2.21.8 (#36889) 2023-04-15 13:07:57 -05:00
Alec Scott
b6c2487f74
r-timedate: add v4022.108 (#36897) 2023-04-15 09:31:54 -07:00
Alec Scott
32c3ce204d
libctl: add v4.5.1 (#36852) 2023-04-15 09:20:43 -05:00
Alec Scott
8893605b1e
r-yulab-utils: add v0.0.6 (#36900) 2023-04-15 08:33:32 -05:00
Alec Scott
1345e98ae7
r-spades-tools: add v1.0.1 (#36892) 2023-04-15 15:25:05 +02:00
Alec Scott
7dfcb37975
r-svglite: add v2.1.1 (#36893) 2023-04-15 15:24:49 +02:00
Alec Scott
7854f64e1e
r-taxizedb: add v0.3.1 (#36894) 2023-04-15 15:24:33 +02:00
Alec Scott
e18f6ffc28
r-tibble: add v3.2.1 (#36895) 2023-04-15 15:24:19 +02:00
Alec Scott
9e463adac1
r-tidytree: add v0.4.2 (#36896) 2023-04-15 15:24:04 +02:00
Alec Scott
839f820127
sdl2: add v2.26.5 (#36901) 2023-04-15 15:22:26 +02:00
Alec Scott
1c0b028aaa
r-utf8: add v1.2.3 (#36898) 2023-04-15 15:22:10 +02:00
Alec Scott
db38f4d75a
r-xts: add v0.13.0 (#36899) 2023-04-15 15:21:54 +02:00
Alec Scott
4cbc0c420c
r-dendextend: add v1.17.1 (#36861) 2023-04-15 08:15:17 -05:00
Alec Scott
856b6d6d01
r-curl: add v5.0.0 (#36860) 2023-04-15 08:03:41 -05:00
Alec Scott
51fb778358
r-earth: add v5.3.2 (#36863) 2023-04-15 07:57:03 -05:00
Howard Pritchard
cad16f5d3d
OpenMPI: tell it where libcuda.so is (#36784)
starting with the 5.0.x release stream the cuda related configury
items in Open MPI once again need --with-cuda-libdir so that
libcuda.so can be found at configure time, otherwise no cuda
support unless someone copies libcuda.so to
$CUDA_HOME/lib64

related to #36760

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2023-04-15 14:53:15 +02:00
Annop Wongwathanarat
cf817bdd4e
openblas: add -Wno-error=implicit-function-declaration for Arm compiler (#36821) 2023-04-15 14:45:35 +02:00
Annop Wongwathanarat
22984edb1b
netlib-scalapack: add -Wno-error=implicit-function-declaration for Arm compiler (#36822) 2023-04-15 14:44:44 +02:00
Annop Wongwathanarat
03ba24b370
scorpio: add -Wno-error=implicit-function-declaration for Arm compiler (#36827) 2023-04-15 14:43:28 +02:00