Commit graph

6030 commits

Author SHA1 Message Date
Harmen Stoppels
40019dacd9
Use bfs in get_spec_filter_list (#36093) 2023-03-14 14:34:56 +01:00
Harmen Stoppels
1691b7caac
Fix typo affecting Gitlab CI (#36103)
Introduced in #35944
2023-03-14 14:18:05 +01:00
Harmen Stoppels
f7da7db9b2
use stage dir for buildcache create (#36091) 2023-03-14 09:35:47 +01:00
Michael Kuhn
5bae742826
concretizer: add mode to reuse dependencies only (#30990)
This adds a new mode for `concretizer:reuse` called `dependencies`,
which only reuses dependencies. Currently, `spack install foo` will
reuse older versions of `foo`, which might be surprising to users.
2023-03-14 09:22:20 +01:00
Greg Becker
66bf9bc7a6
cce compiler: bugfix for version regex to avoid conflation with apple-clang (#35974)
Currently apple-clang is detected as cce, and it should not be.
---------

Co-authored-by: becker33 <becker33@users.noreply.github.com>
2023-03-12 08:17:09 +00:00
Harmen Stoppels
844701b974
get --dev and drop set -x (#36010) 2023-03-10 22:59:57 -08:00
kwryankrattiger
181bb54372
Hotfix: Fix CI unit test after CI refactor (#36004)
* Hotfix: Fix CI unit test after CI refactor
2023-03-10 13:31:40 -08:00
kwryankrattiger
f3595da600
CI boilerplate reduction (#34272)
* CI configuration boilerplate reduction and refactor

Configuration:
- New notation for list concatenation (prepend/append)
- New notation for string concatenation (prepend/append)
- Break out configuration files for: ci.yaml, cdash.yaml, view.yaml
- Spack CI section refactored to improve self-consistency and
composability
  - Scripts are now lists of lists and/or lists of strings
  - Job attributes are now listed under precedence ordered list that are
  composed/merged using Spack config merge rules.
  - "service-jobs" are identified explicitly rather than as a batch

CI:
- Consolidate common, platform, and architecture configurations for all CI stacks into composable configuration files
- Make padding consistent across all stacks (256)
- Merge all package -> runner mappings to be consistent across all
stacks

Unit Test:
- Refactor CI module unit-tests for refactor configuration

Docs:
- Add docs for new notations in configuration.rst
- Rewrite docs on CI pipelines to be consistent with refactored CI
workflow

* Script verbose environ, dev bootstrap

* Port #35409
2023-03-10 12:25:35 -07:00
Greg Becker
a51f4b77d9
reorder_flags: properly handle flags from concrete reused specs (#35951) 2023-03-09 16:46:47 -08:00
Peter Scheibel
1b8561f752
add logging to help users debug where external file searches are taking a long time (#35900) 2023-03-08 09:46:13 -08:00
Scott Wittenburg
4a9ffdcfa2
gitlab ci: Provide a knob to control untouched spec pruning (#35274)
When untouched spec pruning is enabled, specs possibly affected
by a change cannot be pruned from a pipeline.

Previously spack looked at all specs matching changed package
names, and traversed dependents of each, all the way to the
environment root, to compute the set of environment specs
possibly affected by a change (and thus, not candidates for
pruning).

With this PR, when untouched spec pruning is enabled, a new
environment variable can control how far towards the root spack
traverses to compute the set of specs possibly affected by a
change.  SPACK_UNTOUCHED_PRUNING_DEPENDENT_DEPTH can be set
to any numeric value before the "spack ci generate" command
is called to control this traversal depth parameter.  Setting
it to "0" traverses only touched specs, setting it to "1"
traverses only touched specs and their direct dependents, and
so on.  Omitting the variable results in the previous behavior
of traversing all the way to the root.  Setting it to a negative
value means no traversal is done, and always yields an empty
set of possibly affected specs (which would result in the max
pruning possible).
2023-03-08 09:38:07 -07:00
Harmen Stoppels
22d4e79037
buildcache create: reproducible tarballs (#35623)
Currently `spack buildcache create` creates compressed tarballs that
differ between each invocation, thanks to:

1. The gzip header containing mtime set to time.time()
2. The generated buildinfo file which has a different mtime every time.

To avoid this, you have to explicitly construct GZipFile yourself, since
the Python API doesn't expose the mtime arg, and we have to manually
create the tarinfo object for the buildinfo metadata file.

Normalize mode: regular files & hardlinks executable by user, dirs, symlinks: set 0o755 permissions in tarfile; other files use 0o644
2023-03-08 15:51:55 +00:00
Massimiliano Culpo
d54611af2c
Split satisfies(..., strict=True/False) into two functions (#35681)
This commit formalizes `satisfies(lhs, rhs, strict=True/False)`
and splits it into two functions: `satisfies(lhs, rhs)` and
`intersects(lhs, rhs)`.

- `satisfies(lhs, rhs)` means: all concrete specs matching the
   left hand side also match the right hand side
- `intersects(lhs, rhs)` means: there exist concrete specs
   matching both lhs and rhs.

`intersects` now has the property that it's commutative,
which previously was not guaranteed.

For abstract specs, `intersects(lhs, rhs)` implies that
`constrain(lhs, rhs)` works.

What's *not* done in this PR is ensuring that
`intersects(concrete, abstract)` returns false when the
abstract spec has additional properties not present in the
concrete spec, but `constrain(concrete, abstract)` will
raise an error.

To accomplish this, some semantics have changed, as well
as bugfixes to ArchSpec:
- GitVersion is now interpreted as a more constrained
  version
- Compiler flags are interpreted as strings since their
  order is important
- Abstract specs respect variant type (bool / multivalued)
2023-03-08 13:00:53 +01:00
Tamara Dahlgren
b06648eb64
docs: added platform conflicts example, fix quotes (#35771) 2023-03-08 10:10:01 +01:00
Harmen Stoppels
c37d6f97dc
compiler wrapper: parse Wl and Xlinker properly (#35912)
Two fixes:

1. `-Wl,a,b,c,d` is a comma separated list of linker arguments, we
   incorrectly assume key/value pairs, which runs into issues with for
   example `-Wl,--enable-new-dtags,-rpath,/x`
2. `-Xlinker,xxx` is not a think, so it shouldn't be parsed.
2023-03-08 09:03:31 +01:00
Greg Becker
2ff337a2a5
compiler flags: fix multiple compilers with different flags (#35721)
Currently, if two compilers with the same spec differ on the flags, the concretizer will:

1. mix both sets of flags for the spec in the ASP program
2. error noting that the set of flags from the compiler (both of them) doesn't match the set from the lower priority compiler

This PR fixes both -- only flags from the highest priority compiler with a given spec are considered.
2023-03-06 10:29:48 -08:00
Todd Gamblin
42a02411b4
windows: use sys.platform == "win32" instead of is_windows (#35640)
`mypy` only understands `sys.platform == "win32"`, not indirect assignments of that
value to things like `is_windows`. If we don't use the accepted platform checks, `mypy`
registers many Windows-only symbols as not present on Linux, when it should skip the
checks for platform-specific code.
2023-03-05 07:58:05 -08:00
Massimiliano Culpo
046416479a
Polish spack.util.environment (#35812)
Update `spack.util.environment` to remove legacy idioms.
* Remove kwargs from method signature and use a class for traces
* Uppercase a few global variables
* spack.util.environment: add type-hints
* Improve docstrings
* Fixed most style issues reported by pylint
2023-03-03 16:17:27 -05:00
Brian Van Essen
eb29889f6e
Detection of Cray's slingshot detection has relied on the presence of (#35779)
a shared library /lib64/libcxi.so, which seems to also appear on other
non-slingshot systems.  This patch also checks to make sure that there
is a Cray programming enviornment in /opt/cray/pe in addition to the
shared library.
2023-03-01 23:19:20 -08:00
Adam J. Stewart
583d89e95a
Simplify spack help --spec output (#35626) 2023-03-01 16:26:59 +01:00
Adam J. Stewart
146464e063
Docs: fix link to PythonPackage docs (#35725) 2023-03-01 11:14:05 +01:00
Massimiliano Culpo
07e251c887
Remove handling of deprecated target names (graviton) (#35537)
* Update target names for Gitlab pipelines

* Remove handling of deprecated names for graviton
2023-03-01 11:03:12 +01:00
Alberto Invernizzi
4e13b5374f
fix dump problem (#35673)
if dump file existed it was not truncating the file, resulting in
a file with unaltered filesize, with the new content at the beginning,
"padded" with the tail of the old content, since the new content was
not enough to overwrite it.
2023-02-24 21:32:33 -08:00
Todd Gamblin
6b27aebeb4
colify.py: get rid of **kwargs (#35641)
`colify` is an old module in Spack that still uses `**kwargs` liberally. 

We should be more explicit. Doing this eliminates the need for many 
checks (can't pass the wrong arg if it isn't allowed) and makes the 
function documentation more clear.
2023-02-23 11:18:54 -08:00
Harmen Stoppels
3d41b71664
buildcache push: ensure bool arguments for include_* (#35632)
Fixes a bug introduced in 44ed0de8c0
where the push method of binary_distribution now takes named args
include_root and include_depedencies, to avoid the **kwarg hole.

But the call site wasn't update and we passed a dict of keys/values instead
of arguments, which resulted in a call like this:

```
push(include_root={"include_root": True, "include_dependencies": False})
```

This commit fixes that, and adds a test to see if we push the correct packages.
2023-02-23 01:44:47 +01:00
Harmen Stoppels
3be9af8c13
copy_files_to_artifacts: error -> warning (#35613)
This error shows up a lot, typically it's harmless because an error
happened before the source build even started, in which case we don't
have build logs to copy. So, warn instead of error, cause it distracts
from the actual CI error.
2023-02-22 11:53:42 +00:00
Harmen Stoppels
6e477d547d
add cdash arg to source build only (#35565) 2023-02-22 11:08:32 +01:00
Harmen Stoppels
9d6630e245
spack build-env: error when deps are not installed (#35533)
Currently we attempt to setup the build environment even when
dependencies are not installed, which typically results in error while
searching for libraries or executables in a dependency's prefix.

With this change, we get a more user friendly error:

```
$ spack build-env perl
==> Error: Not all dependencies of perl are installed, cannot setup build environment:
 -   qpj6dw5  perl@5.36.0%apple-clang@14.0.0+cpanm+open+shared+threads build_system=generic arch=darwin-ventura-m1
 -   jq2plbe      ^berkeley-db@18.1.40%apple-clang@14.0.0+cxx~docs+stl build_system=autotools patches=26090f4,b231fcc arch=darwin-ventura-m1
...
$ echo $?
1
```
2023-02-22 10:35:44 +01:00
psakievich
b8d15e816b
Allow users to specify root env dir (#32836)
* Allow users to specify root env dir

Environments managed by spack have some advantages over anonymous Environments
but they are tucked away inside spack's directory tree. This PR gives
users the ability to specify where the environments should live.

See #32823

This is also taken as an opportunity to ensure that all references are to "managed environments",
rather than "named environments". Prior to this PR some references to the latter persisted.

Co-authored-by: Tom Scogland <scogland1@llnl.gov>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
Co-authored-by: Gregory Becker <becker33@llnl.gov>
2023-02-22 00:37:14 +00:00
Harmen Stoppels
bc24a8f290
Spec.satisfies should be commutative when strict=False (#35598)
The call:
```
x.satisfies(y[, strict=False])
```
is commutative, and tests non-empty intersection, whereas:
```
x.satsifies(y, strict=True)
```
is not commutative, and tests set-inclusion.

There are 2 fast paths. When strict=False both self and other need to 
be concrete, when strict=True we can optimize when other is concrete.
2023-02-21 14:30:47 +01:00
simon-Leary42
33bf1fd033
nonexistent module concise error message (#35502) 2023-02-21 04:50:56 -08:00
Adam J. Stewart
ce9f8143cc
Fix view support for optional Python extensions (#35489)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2023-02-20 11:58:28 -08:00
Harmen Stoppels
c1ff7bbf04
environment views: better, earlier error on clash (#35541)
Spack generally ignores file-file projection clashes in environment
views, but would eventually error when linking the `.spack` directory
for two specs of the same package.

This leads to obscure errors where users have no clue what the issue is
and how to fix it. On top of that, the error comes very late, since it
happens when the .spack dir contents are linked (which happens after
everything else)

This PR improves that by doing a quick check ahead of time if clashes
are going to be anticipated (by simply checking for clashes in the
projection of each spec's .spack metadir). If there are clashes, a
human-readable error is thrown which shows two of the conflicting specs,
and tells users to user unify:true, view:false, or set up custom
projections.
2023-02-20 19:14:27 +01:00
Ben Wibking
e8238fe330
Patchel shutil.copystat to avoid PermissionError on Lustre (#27247) 2023-02-20 17:28:03 +01:00
Harmen Stoppels
5e337d907b
spack ci: remove 120s db timeout since 60s is the default now (#35566) 2023-02-20 14:41:26 +01:00
Harmen Stoppels
208c9585b8
Revert "lib/spack/spack/store.py: Fix #28170 for padding relocation (#33122)" (#35077)
This reverts commit c721aab006.
2023-02-20 13:56:11 +01:00
elenimath
c769582709
Pass tests argument to solver method when concretizing together (#35290)
to make the workaround for #29447 work with `concretizer:unify:true` option
2023-02-20 10:21:24 +01:00
Adam J. Stewart
7c01d3ba35
Fix broken links in docs (#35582) 2023-02-20 09:21:18 +01:00
Harmen Stoppels
86320eb569
Improve error handling in buildcache downloads (#35568)
The checksum exception was not detailed enough and not reraised when using cache only, resulting in useless error messages.

Now it dumps the file path, expected
hash, computed hash, and the downloaded file summary.
2023-02-18 19:22:48 +01:00
Harmen Stoppels
fb644de086
clang/apple-clang correct c/c++ standard flags (#35062) 2023-02-17 23:18:01 +01:00
Adam J. Stewart
603569e321
Style: black 23, skip magic trailing comma (#35351)
* Style: black 23, skip magic trailing commas

* isort should use same line length as black

* Fix unused import

* Update version of black used in CI

* Update new packages

* Update new packages
2023-02-16 23:06:12 -06:00
Harmen Stoppels
68b711c1ad
view: fix issue with non-contributing specs (#34661)
Specs that did not contribute any files to an env view caused a problem
where zip(specs, files grouped by prefix) got "out of sync", causing the
wrong merge map to be passed to a package's `add_files_to_view`, which
specifically caused an issue where *sometimes* bin/python ended up as a
symlink instead of a copy.

One such example is kokkos + kokkos-nvcc-wrapper, as the latter package
only provides the file bin/nvcc_wrapper, which is also added to view by
kokkos, causing kokkos-nvcc-wrapper to contribute 0 files.

The test feels a bit contrived, but it captures the problem... pkg a is
added first and has 0 files to contribute, pkg b adds a single file, and
we check if pkg b receives a merge map (and a does not).
2023-02-16 10:36:22 -08:00
Harmen Stoppels
96ac4c7f98
simplify cdash filename (#35509) 2023-02-16 18:25:39 +01:00
Harmen Stoppels
44ed0de8c0
spack buildcache create: push all deps / cleanup (#34860) 2023-02-16 14:08:49 +00:00
Harmen Stoppels
09eb86e077
spack uninstall: follow run/link edges on --dependents (#34058)
`spack gc` removes build deps of explicitly installed specs, but somehow
if you take one of the specs that `spack gc` would remove, and feed it
to `spack uninstall /<hash>` by hash, it complains about all the
dependents that still rely on it.

This resolves the inconsistency by only following run/link type deps in
spack uninstall.

That way you can finally do `spack uninstall cmake` without having to
remove all packages built with cmake.
2023-02-16 14:26:30 +01:00
Massimiliano Culpo
50691ccdd9
Avoid verifying variants in default package requirements (#35037)
Default package requirements might contain
variants that are not defined in each package,
so we shouldn't verify them when emitting facts
for the ASP solver.

Account for group when enforcing requirements

packages:all : don't emit facts for requirement conditions
that can't apply to current spec
2023-02-16 11:57:26 +01:00
Harmen Stoppels
ce693ff304
buildcache create: avoid prefix copy (#35173) 2023-02-16 11:52:10 +01:00
Adam J. Stewart
dd434ec413
Use the maintainers directive in all base classes (#35324)
* Use the `maintainers` directive in all base classes
* Update unit tests
2023-02-15 01:33:29 -08:00
luker
9b3c4e0696
Update cce.py (#35469)
* Update cce.py

adding c++17 flag for cce

* Update cce.py
2023-02-14 07:37:34 +00:00
John W. Parent
e1341d70ce
MSBuilder/MSVC: correct toolchain ver (#35424)
#35098 added the correct extraction of toolset version for the MSVC
compiler. This updates the associated method in MSBuilder to retrieve
the (now correct) property.
2023-02-10 10:53:16 -08:00