Commit graph

33030 commits

Author SHA1 Message Date
Adam J. Stewart
20d2e6a9fd
py-pyproj: add v3.5.0 (#36504)
* py-pyproj: add v3.5.0
* PROJ: add v9, fix datum grid installation
* [@spackbot] updating style on behalf of adamjstewart

---------

Co-authored-by: adamjstewart <adamjstewart@users.noreply.github.com>
2023-03-29 12:30:39 -07:00
snehring
b6390e335c
gmap-gsnap: Adding new version and perl run dep (#36508) 2023-03-29 12:28:17 -07:00
Ivan Maidanski
3e09f04241
libatomic_ops: add v7.8.0 (#36515) 2023-03-29 12:23:16 -07:00
Harmen Stoppels
67c4ada08b
py-cython: set upperbound for backported patch (#36525) 2023-03-29 12:43:40 -04:00
Adam J. Stewart
701e46464d
Python: add Apple Clang version conflicts (#36511)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-03-29 10:49:10 -04:00
Harmen Stoppels
dba57ff113
ci: require x86_64_v3 everywhere (#36158) 2023-03-29 15:58:48 +02:00
Massimiliano Culpo
7579eaf75a
Fix dyninst build with old boost (#36198)
Fix patching old boost versions to account for builders.

Add a proper version constraint on boost for recent dyninst.
The constraint can be found in dyninst source code under
"cmake/Boost.cmake" which contains:

  set(_boost_min_version 1.70.0)

Co-authored-by: Greg Becker <becker33@llnl.gov>
2023-03-29 15:26:51 +02:00
julian-zeidler
aa99063065
charliecloud: add squashfuse variant, add v0.32, v0.31 (#36404) 2023-03-29 01:33:05 -04:00
John W. Parent
18c21d0c32
Add CMake version 3.26.1 (#36349) 2023-03-28 21:03:39 -04:00
John W. Parent
6b03c9f285
Windows: spack.bat CLI handling robustness (#36281)
* Current develop spack.bat file cannot handle any reserved characters
  being passed via the CLI, particularly '=' and '?'. To address this,
  re-do the CLI parsing for loop to use custom logic to allow for more
  granular handling of CLI args.
* We take a less-than-ideal approach to escaping local scope and
  handling unset variables as well as the actual parsing of CL
  arguments. To address this, don't quote the args and then try to
  parse the quotes we just added (resulting in spack flags being
  undefined). Instead, leverage batch script features. Since we are
  not unnecessarily quoting things, we don't need to think about
  removing them, and in the case of paths with spaces, we should _not_
  be removing the quotes as we currently do.
2023-03-28 16:50:37 -07:00
John W. Parent
7ffe2fadfe
WGL package: correct libs/headers detection (#35113)
Corrects libs detection with a more specific root, otherwise there
can be inconsistencies between version of WGL requested and the
version picked up by `find_libraries`.

Corrects headers detection - win-sdk, win-wdk, and WGL headers all
exist under the same directory, so we can compute the headers for WGL
without querying the spec for win-sdk (which causes errors).

This commit also removes the `plat` variant of `wgl`, which is
redundant with the Spec's target.
2023-03-28 16:31:10 -07:00
Ashwin Kumar Karnad
a3a9b48ed7
octopus: Add pnfft variant (#36492) 2023-03-28 13:50:36 -07:00
Laura Weber
e0fb737e8e
SublimeText: add Sublime Text 4, build 4143 (#36480)
* Add Sublime Text 4, build 4143
* Reformatted with black
* Manual formatting adjustments.
2023-03-28 13:49:27 -07:00
Alec Scott
5e70943d1b
perl-extutils-makemaker: add v7.70 (#36478) 2023-03-28 13:43:20 -07:00
Alec Scott
a48abfee75
at-spi2-core: add v2.48.0 (#36477) 2023-03-28 13:37:58 -07:00
Erik Heeren
af86759116
glm: add version 0.9.9.3 (#36486) 2023-03-28 13:34:21 -07:00
Erik Schnetter
6a868ec9c5
snappy: New version 1.1.10 (#36473) 2023-03-28 13:09:17 -07:00
Ryan Marcellino
c6ab42a86a
xdotool: add version 3.20211022.1 (#36505) 2023-03-28 12:56:13 -07:00
Ryan Marcellino
a771bfadd1
py-pyautogui: add v0.9.53 (#36498) 2023-03-28 13:50:29 -05:00
Todd Gamblin
d76a8b7de7
retry: bugfix: package requirements with git commits (#35057) (#36347)
- [x] Specs that define 'new' versions in the require: section need to generate associated facts to indicate that those versions are valid.
- [x] add test to verify success with unknown versions.
- [x] remove unneeded check that was leading to extra complexity and test
      failures (at this point, all `hash=version` does not require listing out that version
      in `packages.yaml`)
- [x] unique index for origin (dont reuse 0)

Co-authored-by: Peter Josef Scheibel <scheibel1@llnl.gov>
2023-03-28 11:18:54 -07:00
MatthewLieber
9a93f223d6
mvapich: add pmi_version variant, add process_manager=none (#36324)
Co-authored-by: Matt Lieber <lieber.31@osu.edu>
2023-03-28 19:46:42 +02:00
Howard Pritchard
b8735fd1e4
PMIX: add current 4.2.x releases (#36496)
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2023-03-28 10:13:26 -07:00
Erik Schnetter
eb80f4d9af
simulationio: New version 9.0.3 (#36465)
* simulationio: New version 9.0.3
* simulationio: Require swig @3
2023-03-28 10:09:13 -07:00
Gerhard Theurich
9160e78729
Add ESMF v8.4.1, and number of other changes to improve ESMF integration with Spack (#35980)
* Add v8.4.1, and a few other changes.
    Minor adjustments for better alignment between Spack and ESMF native
    build. For ESMF >= 8.3.1 now Spack defaults to using
    external-parallelio. Before use internal version, which was PIO-1 all
    the way up to v8.3.0b10 anyway! Xerces is disabled by default.
* Deal with two long lines flagged by prechecks/style.
* Try to satisfy prechecks/style.
* Try to satisfy flake8 rules wrt indentation of continuation lines.
* Now trying to satisfy "black reformatting".
* For "black" formatting really put that ugly comma at the end before
closing parentheses. Interesting.
* Support building against external-parallelio even w/o mpi, but select the
   external-parallelio dependency accordingly.
* Correct C compiler setting.
* Handle `pnetcdf` variant consistent with how `ParallelIO` does it. And
  also pass the `pnetcdf` variant down to the `external-parallelio`
  dependency if set.
* Long line formatting again.
* Simplify handling of tarball URL construction and update sha256
  checksums.
* Align version check with recommended self.spec.satisfies().
* Deprecate v8.4.0 which has a bug that can cause memory corruption, fixed
  in v8.4.1.
* Use double quotes vs single quotes as per style-check... although
  https://spack-tutorial.readthedocs.io/en/latest/tutorial_packaging.html#querying-spec-versions
  clearly shows it with single quotes.
2023-03-28 09:33:49 -07:00
Eric Brugger
0d829b632f
VisIt: Update to VisIt 3.3.1. (#36464) 2023-03-28 10:08:03 -04:00
eugeneswalker
c88b30b426
e4s power ci: ecp-data-vis-sdk: disable visit due to build issues (#36475) 2023-03-28 06:02:47 -04:00
Harmen Stoppels
d862edcce0
macos: set new ad-hoc signature with codesign after binary string replacement (#35585) 2023-03-28 00:33:35 -04:00
Erik Heeren
3b497359b7
ISPC: unblock 1.17-1.19 (#36346)
* ispc: attempts at getting more recent versions to work
* ispc: more attempts to get newer versions to build
* ispc: cleanup
* llvm: remove ispc_patches variant again
* ispc: unpin ncurses
* ispc: satisfy style checks
* ispc: 1.19 is only compatible with LLVM 13-15 
  otherwise it would not build against develop, as this now has LLVM 16
* ispc: relax LLVM version to what ispc requires itself
  verified that it builds against LLVM 13, 14, 15, but not 12 and 16
* ispc: use spec.satisfies instead of version comparison
  according to suggestions from review and docs, this is the canonical way to do it
* ispc: checksum 1.18.1
  just in order to include all versions, also checked that it builds

---------

Co-authored-by: Martin Aumüller <aumuell@reserv.at>
2023-03-27 11:30:36 -07:00
G-Ragghianti
4c599980da
Package heffte: Enable smoke test to find MPI launcher (#35724)
* Enable smoke test to find MPI launcher
* Adding self as maintainer
* Style fix
* Update var/spack/repos/builtin/packages/heffte/package.py

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-03-27 11:26:56 -07:00
Ashwin Kumar Karnad
7266cc9b92
octopus: Update compiler flags (#36446)
* octopus: set the right compiler flags
  https://github.com/fangohr/octopus-in-spack/pull/70
* octopus: fix pep8 style issue
2023-03-27 11:13:28 -07:00
Annop Wongwathanarat
cc4a528274
sw4lite: add linking with libarmflang (#36461) 2023-03-27 11:08:53 -07:00
Shihab Shahriar Khan
efbfe38f63
arborx: make explicit the need to specify cuda_arch when +cuda (#36450) 2023-03-27 10:49:17 -07:00
Harmen Stoppels
5072e48dab
Add llnl.util.filesystem.find_first (#36083)
Add a `find_first` method that locates one instance of a file
that matches a specified pattern by recursively searching a directory
tree. Unlike other `find` methods, this only locates one file at most,
so can use optimizations that avoid searching the entire tree:
Typically the relevant files are at low depth, so it makes sense to
locate files through iterative deepening and early exit.
2023-03-27 09:42:16 -07:00
Satish Balay
c5b3fc6929
py-mpi4py: always force rebuild cython sources (#36460) 2023-03-27 10:05:31 -05:00
kaanolgu
deca4ce107
Babelstream Spack Package (#36164) 2023-03-27 17:04:28 +02:00
Jose E. Roman
e612436e26
New patch release SLEPc 3.18.3 (#36401)
Thanks-To: Satish Balay
2023-03-27 09:47:18 -05:00
Wouter Deconinck
fd19759783
xrootd: update patch (#36350)
Due to case change, a patch in xrootd doesn't apply cleanly. This fixes the patch by turning it into a `filter_file` with a more limited regex match.
2023-03-27 11:36:24 +02:00
Paul R. C. Kent
3265215f1d
py-pyscf: add v2.2.0,2.1.1,2.1.0 libcint: add v5.2.0 (#35497)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-27 11:34:17 +02:00
Auriane R
428e5726c1
Rename p2300 variant with stdexec (#36322) 2023-03-27 11:24:25 +02:00
dependabot[bot]
e0570c819c
build(deps): bump actions/checkout from 3.4.0 to 3.5.0 (#36418)
Bumps [actions/checkout](https://github.com/actions/checkout) from 3.4.0 to 3.5.0.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](24cb908017...8f4b7f8486)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-03-27 09:16:07 +00:00
Xavier Delaruelle
ea60220a84
modules: enhance help message (#36410)
Update tcl and lmod modulefile template to provide more information on
help message (name, version and target) like done on whatis for lmod
modulefiles.
2023-03-27 10:48:25 +02:00
Dennis Klein
84d67190a6
fairlogger: new versions, deprecations and various other updates (#36405) 2023-03-27 10:46:15 +02:00
Alec Scott
80a34ae9cc
perl-moose: add v2.2203 (#36368) 2023-03-27 10:42:39 +02:00
Tamara Dahlgren
7beb57cb05
Bugfix: add perl-data-optlist 0.113 dependency (#36411) 2023-03-27 10:42:15 +02:00
Wouter Deconinck
055c30acfb
root: new version 6.28.02 (#36419)
Only bugfixes: https://root.cern/doc/v628/release-notes.html#release-6.2802.

Builds fine on my test system:
```
[+] /opt/software/linux-ubuntu23.04-skylake/gcc-12.2.0/root-6.28.02-zwzhoz6d4323lggrqi66y6prg4hlzwie
```
2023-03-27 10:34:00 +02:00
Alec Scott
3cd61b9b83
libslirp: add v4.7.0 (#36423) 2023-03-27 10:33:25 +02:00
Alec Scott
6e8f449882
perl-exporter-tiny: add v1.006001 (#36424) 2023-03-27 10:33:07 +02:00
Alec Scott
51b0023638
perl-params-validate: add v1.31 (#36425) 2023-03-27 10:32:51 +02:00
Alec Scott
f02c374181
perl-time-hires: add v1.9758 (#36426) 2023-03-27 10:32:36 +02:00
Alec Scott
ff3245382e
perl-time-piece: add v1.3401 (#36427) 2023-03-27 10:32:20 +02:00