Spack heuristically adds `<install prefix>/lib` and `<install prefix>/lib64` as rpath entries, as it doesn't know what the install dir is going to be ahead of the build. This PR cleans up non-existing, absolute paths[^1], which
1. avoids redundant stat calls at runtime
2. drops redundant rpaths in `patchelf`, making it relocatable -- you don't need patchelf recursively then.
[^1]: It also removes relative paths not starting with `$` (so, `$ORIGIN/../lib` is retained -- we _could_ interpolate `$ORIGIN`, but that's hard to get right when symlinks have to be taken into account). Relative paths _are_ supported in glibc, but are relative to _the current working directory_, which is madness, and it would be better to drop those paths.
A LazyReference object is a reference to an attribute of a
lazily evaluated singleton. Its only purpose is to let developers
use shorter names to refer to such attribute.
This class does more harm than good, as it obfuscates the fact
that we are using the attribute of a global object. Also, it can easily
go out of sync with the singleton it refers to if, for instance, the
singleton is updated but the references are not.
This commit removes the LazyReference class entirely, and access
the attributes explicitly passing through the global value to which
they are attached.
Without the package name being present in the conflict messages, it is
significantly more difficult to debug concretization failures in
environments that contain many packages.
mesa-glu still has a couple instances of the register keyword which
causes build failures with clang on my platform. This patch removes the
register keyword which doesn't have any impact on correctness.
gperf still uses the register keyword in one place which makes
compilation fail with c++17. This patch adds in a patch file to remove
the usage of the reigster keyword so that it compiles properly.
In late 2021 elfutils was patched to make it build with clang, and these
patches ended up in version 0.186. This commit updates the conflicts to
specify this so elfutils can be built with clang.
These tests now work without any changes to core. Furthermore, it is
surprising that they had to be disabled (at least, as long as the
installer.py tests are run on Windows: these tests are more-basic
and their functionality would have been exercised automatically).
* py-poetry-core: add 1.6.1 and fix url
* Update var/spack/repos/builtin/packages/py-poetry-core/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Re-add python upper bound for older versions
* Update var/spack/repos/builtin/packages/py-poetry-core/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
---------
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
In Clang 15, -Wint-conversion became an error instead of a warning,
breaking the fftw build for clang versions > 15. This patch fixes fftw
builds with clang 15+ by passing -Wno-error=int-conversion as a cflag.
Without --allow-root spack cannot push binaries that contain paths in
binaries. This flag is almost always needed, so there is no point of
requiring users to spell it out.
Even without --allow-root, rpaths would still have to be patched, so the
flag is not there to guarantee binaries are not modified on install.
This commit makes --allow-root the default, and drops the code
required for it. It also deprecates `spack buildcache preview`, since
the command made sense only with --allow-root.
As a side effect, Spack no longer depends on binutils for relocation
Add support for conflict directives in Lua modulefile like done for Tcl
modulefile.
Note that conflicts are correctly honored on Lmod and Environment
Modules <4.2 only if mutually expressed on both modulefiles that
conflict with each other.
Migrate conflict code from Tcl-specific classes to the common part. Add
tests for Lmod and split the conflict test case in two.
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
* When using system tools to unpack a .gz file, the input file needs a
different name than the output file. Normally, we generate this new
name by stripping off the .gz extension off of the file name.
This was not sufficient if the file name did not have an extension,
so we temporarily rename the file in that case.
* When using system tar utility to untar on Windows, we were (erroneously)
skipping the actual untar step if the filename was lacking a .tar
extension
* For foo.txz, we were not changing the extension of the decompressed file
(i.e. we would decompress foo.txz to foo.txz). This did not cause any
problems, but is confusing, so has been updated such that the output
filename reflects its decompressed state (i.e. foo.tar).
* Added test for strip_compression_extension
* Update test_native_unpacking to test each archive type with and without
an extension as part of the file name (i.e. we test "foo.tar.gz", but
also make sure we decompress properly if it is named "foo").
* py-pyside: fix build for version 1.2.2
* Remove check for python version
* Fix style
* Remove unnecessary patch
* Update var/spack/repos/builtin/packages/py-pyside/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-pyside/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Remove py-markupsafe conflict
* Update var/spack/repos/builtin/packages/py-pyside/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-pyside/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Move python check removal below suprocess patch
* Remove preference of 1.2.2
---------
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* soapdenovo2: strip optimization flags from injected flags
* soapdenovo2: add maintainer
* soapdenovo2: only append on cflags
* soapdenovo2: clean up some wording and implementation
