Commit graph

1570 commits

Author SHA1 Message Date
Erik Schnetter
12632f16b8 Combine with other OpenSSL Darwin patch
Set KERNEL_BITS.
Don't use Darwin-specific configure script.
2016-01-05 13:17:17 -05:00
Erik Schnetter
25934200de Merge branch 'develop' into eschnett/openssl-darwin 2016-01-05 13:09:57 -05:00
Erik Schnetter
24ced90913 Correct join_path in package boost 2016-01-05 09:40:30 -05:00
Todd Gamblin
0dcc87bd21 Merge pull request #289 from trws/zsh-array-fix
another portability fix, this time for zsh/non-bash sh
2016-01-05 00:43:08 -08:00
Todd Gamblin
20e8b67eb6 Merge pull request #297 from eschnett/eschnett/boost-darwin
Support Darwin for Boost
2016-01-05 00:42:31 -08:00
Todd Gamblin
7e362e0c46 Merge pull request #300 from eschnett/eschnett/multi-fftw
Build multiple FFTW variants simultaneously
2016-01-05 00:39:50 -08:00
Erik Schnetter
96e5905bce Build multiple FFTW variants simultaneously
FFTW can build only one floating point precision (float, double, long double, quad) at once, but they can all be installed simultaneously as the libraries have different names. It is common packages to decide only at run time which precision FFTW they need, and thus FFTW should offer all precisions at once.
2016-01-04 12:14:42 -05:00
Tom Scogland
133fda11f2 Merge remote branch 'origin/llvm-rework' into llvm-rework 2016-01-03 17:22:57 -08:00
Tom Scogland
884f317d50 tweak gold support, added to gcc
The gold linker support and gold plugin variants now use the same name.
Trying to apply use-flag-style discipline here despite the fact gold has
other implications for clang, this way globally enabling gold will have
a more consistent effect if that becomes possible.  The gold support in
gcc could use more testing to ensure it works consistently, but as long
as a binutils including gold is used the gcc configure tends to pick it
up, and it seems to work with 5.3.0 at least.
2016-01-03 17:22:13 -08:00
Todd Gamblin
b02faf5641 add/remove/list working for new config format.
- mirrors.yaml now uses dict order for precedence, instead of lists of
  dicts.

- spack.cmd now specifies default scope for add/remove and for list
  with `default_modify_scope` and `default_list_scope`.
  - commands that only read or list default to all scopes (merged)
  - commands that modify configs modify user scope (highest
    precedence) by default
  - These vars are used in setup_paraser for mirror/repo/compiler.

- Spack's argparse supports aliases now.
  - added 'rm' alias for `spack [repo|compiler|mirror] remove`
2016-01-03 02:27:50 -08:00
Todd Gamblin
21fae634a5 Add Python 3 aliases to our argparse backport. 2016-01-03 01:19:03 -08:00
Todd Gamblin
56937416a9 All tests that call concretize() need to be MockPackagesTests. 2016-01-02 18:18:00 -08:00
Todd Gamblin
20b7f8a8e0 Fix bug in tests. 2016-01-02 14:25:10 -08:00
Tom Scogland
31803d10aa bringing back configuration and build stages 2016-01-02 11:59:33 -08:00
Tom Scogland
356836ccbb removed extraneous comment lines 2016-01-01 22:30:02 -08:00
Erik Schnetter
03537a6be4 Support Darwin for Boost
Ensure that builds on Darwin use the "darwin" toolset.
Also update Boost to 1.60.0.
2016-01-01 17:38:42 -05:00
Erik Schnetter
f5a49280c3 Enable C++ and Fortran languages by default 2016-01-01 17:26:49 -05:00
Todd Gamblin
3c64c18bfc Merge pull request #274 from eschnett/eschnett/julia
Add package for Julia
2015-12-31 15:46:52 -08:00
Todd Gamblin
48ebb25c25 Merge pull request #271 from eschnett/eschnett/pcre2
New package PCRE2
2015-12-31 15:40:03 -08:00
Todd Gamblin
7062b216b8 Merge pull request #258 from epfl-scitas/packages/scalasca
Packages/scalasca
2015-12-31 15:27:39 -08:00
Todd Gamblin
99a73cb4fa Merge pull request #290 from trws/some-packages
python libraries, libedit, and ninja
2015-12-31 15:24:23 -08:00
Tom Scogland
48f19b5fde add the gold linker to binutils 2015-12-30 16:59:39 -08:00
Tom Scogland
5d89fb8dfa ensure that clang-query gets installed 2015-12-30 16:59:39 -08:00
Tom Scogland
4ae98f8b21 significant llvm update
This update significantly reworks the llvm and clang packages.  The llvm
package now includes variants allowing it to build and install any and
all of:

* clang
* lldb
* llvm's libunwind (why, WHY did they name it this?!?)
* polly (including building it directly into the clang tools, 3.7.0 only)
* clang extra tools
* compiler-rt (sanitizers)
* clang lto (the gold linker plugin that allows same to work)
* libcxx/libcxxabi
* libopenmp, also setting the default openmp runtime to same, when
  parameters happen this shoudl be an option of libomp or libgomp

Ideally, this should have rpath setup like the gcc package does, but
clang's driver has no support for specs as such, and no clearly
equivalent mechanism either.  If anyone has ideas on this, they would be
welcome.

One significant note related to gcc though, if you test this on LLNL
systems, or anywhere that has multiple GCCs straddling the dwarf2
boundary and sharing a libstdc++, build a gcc with spack and use that to
build clang.  If you use a gcc4.8+  to build this with an older
libstdc++ it will fail on missing unwind symbols because of the
discrepancy.

Resource handling has been changed slightly to move the unpacked archive
into the target rather than use symlinks, because symlinks break certain
kinds of relative paths, and orders resource staging such that nested
resources are unpacked after outer ones.
2015-12-30 16:59:39 -08:00
Tom Scogland
fcdf08e4d7 allow nested resources
This solution doesn't really make me happy, but does seem to work.  It
sorts the resources by the length of the string representing their
destination.  Since any nested resource must contain another resource's
name in its path, it seems that should work, but there should be a
better way to do this.
2015-12-30 16:59:39 -08:00
Tom Scogland
cc8c783bb2 adding errno import for the deep directory creation patch 2015-12-30 16:59:39 -08:00
Tom Scogland
30f5ccb80d create leading directories for resources
This allows resources to be placed into subdirectory trees that may not
exist in the base package, and may depend on other resources to be
staged later.
2015-12-30 16:59:39 -08:00
Tom Scogland
01f811d546 legacy mysql bindings for python 2015-12-30 11:18:13 -08:00
Tom Scogland
31f674da3c python libraries, libedit, and ninja
A pile of libraries and tools, libedit is actually important as a
replacement of readline for non-GPL projects.  Also ninja may be
worthwhile for some of the larger CMake projects, like llvm/clang.
2015-12-30 11:13:09 -08:00
Tom Scogland
926efed31c another portability fix, this time for zsh/non-bash sh
Yay for non-portable declaration syntax.  After the previous screwiness
I ran this through a number of shells, and found that this is the most
portable version I coudl seem to get.
2015-12-30 10:55:52 -08:00
Todd Gamblin
d842365e4c Merge pull request #288 from trws/zsh-array-fix
removing ill-fated array check for non-portability
2015-12-30 10:34:31 -08:00
Tom Scogland
8726d2fe2e removing ill-fated array check for non-portability 2015-12-30 10:29:11 -08:00
Todd Gamblin
3e3667f254 Revert "removing check as it can cause failures in zsh"
This reverts commit 496e485691.

Undo overly large set of changes -- LLVM wasn't ready.  Tom can
recommit just the zsh stuff.
2015-12-30 10:20:27 -08:00
Tom Scogland
496e485691 removing check as it can cause failures in zsh 2015-12-30 10:13:46 -08:00
Todd Gamblin
99a73c5991 Merge pull request #285 from trws/args-check
fix for array handling in ancient bash
2015-12-29 09:22:32 -08:00
Tom Scogland
d7607973fa fix for array handling in ancient bash
fixes #284
2015-12-29 09:04:54 -08:00
Todd Gamblin
e8e6368cc8 Rework mirror configuration.
- All of these work:
  - `spack mirror add`
  - `spack mirror remove`
  - `spack mirror list`

- `spack mirror` subcommands (except create) now have their own
  --scope argument.

- Mirror config is now stored sanely as an ordered list.
2015-12-28 01:14:41 -08:00
Todd Gamblin
1f8ba53ca7 Rework compiler configuration and simplify config.py logic.
- `spack compiler` subcommands now take an optional --scope argument.

- no more `remove_from_config` in `config.py` -- `update` just
  overwrites b/c it's easier to just call `get_config`, modify YAML
  structures directly, and then call `update`.

- Implemented `spack compiler remove`.
2015-12-28 00:46:51 -08:00
Todd Gamblin
ff0d871612 Remove mock_configs; tests no longer modify spack home directory. 2015-12-27 21:13:18 -08:00
Todd Gamblin
39e360f93a Add custom YAML loader & dumper to track lines & maintain dict order.
- Configs are now parsed with `spack.util.spack_yaml.load/dump`

- Parser annotates returned data with `_start_mark` and `_end_mark`
  properties, so that we can recover what lines/files they came from.

- Parser uses `OrderedDict` instead of `dict`.  This will help
  maintain some sanity when round-tripping config files.
2015-12-27 17:51:11 -08:00
Todd Gamblin
4e8e298eb3 Uncomment disabled tests. 2015-12-27 17:40:31 -08:00
Todd Gamblin
487ac9cd19 Merge pull request #277 from LLNL/bugfix/vcs-mirror-fetch
Fix #85 and #228: errors fetching VCS packages from a mirror.
2015-12-26 09:28:38 -08:00
Todd Gamblin
bef52570ae Default to scope with highest precedence instead of user scope,
- Generalizes config scopes a bit more: nothing assumes there is a
  'user' scope (this would break testing sometimes).
2015-12-25 18:42:06 -08:00
Todd Gamblin
c65fd3a289 Merge branch 'develop' into mplegendre-multi_pkgsrc_roots
Conflicts:
	lib/spack/spack/cmd/create.py
	lib/spack/spack/cmd/extensions.py
	lib/spack/spack/cmd/fetch.py
	lib/spack/spack/cmd/uninstall.py
	lib/spack/spack/config.py
	lib/spack/spack/database.py
	lib/spack/spack/directory_layout.py
	lib/spack/spack/packages.py
	lib/spack/spack/spec.py
2015-12-25 16:35:55 -08:00
Todd Gamblin
34401cf0c3 Rework Spack config: keep user & site config in memory.
- User and site config are now kept separately in memory.
- Merging is done on demand when client code requests the configuration.
- Allows user/site config to be updated independently of each other by commands.
- simplifies config logic (no more tracking merged files)
2015-12-25 14:00:33 -08:00
Erik Schnetter
be12720eb7 Use filter_file instead of calling perl 2015-12-25 14:02:56 -05:00
Todd Gamblin
9a23e1a9df Merge pull request #211 from LLNL/bugfix/github-154
Fix #154 -- better log messages for do_patch()
2015-12-24 11:46:32 -08:00
Todd Gamblin
52625de52c Fix #154 -- better log messages for do_patch() 2015-12-24 11:37:40 -08:00
Erik Schnetter
01f7e768f6 Enable several variants for HDF5
+cxx, +fortran: Enable support for the respective languages
+threadsafe: Enable multi-threading
2015-12-23 22:49:42 -05:00
Todd Gamblin
f37f872e5f Fix #85 and #228: errors fetching VCS packages from a mirror.
- Stage and fetcher were not being set up properly when fetching using
  a different fetch strategy than the default one for the package.

- This is fixed but fetch/stage/mirror logic is still too complicated
  and long-term needs a rethink.

- Spack will now print a warning when fetching a checksum-less tarball
  from a mirror -- users should be careful to use https or local
  filesystem mirrors for this.
2015-12-23 16:23:58 -08:00