Commit graph

33701 commits

Author SHA1 Message Date
dependabot[bot]
e3b71b32aa
build(deps): bump mypy from 1.5.1 to 1.6.0 in /lib/spack/docs (#40424)
Bumps [mypy](https://github.com/python/mypy) from 1.5.1 to 1.6.0.
- [Commits](https://github.com/python/mypy/compare/v1.5.1...v1.6.0)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-10-11 12:35:41 +00:00
Alec Scott
6d1711f4c2
Update legacy .format() calls to fstrings in installer.py (#40426) 2023-10-11 12:35:37 +00:00
Massimiliano Culpo
26f291ef25
spack buildcache: fix a typo in a function call (#40446)
fixes #40415
2023-10-11 13:09:21 +02:00
Martin Aumüller
da030617a1
botan: checksum 3.2.0 (#40417) 2023-10-10 21:52:51 -06:00
Martin Aumüller
1ebfcd3b18
openvkl: add 1.3.2 (#40392)
* openvkl: add 1.3.2

works with (and requires) embree@4

* openvkl: simplify formatting with f-string

thank you for the suggestion in the review
2023-10-10 21:24:17 -06:00
Edward Hartnett
d385a57da3
w3emc: add v2.11.0 (#40376)
* added version 2.11.0

* more fixes
2023-10-10 15:11:14 -07:00
eugeneswalker
37df8bfc73
e4s arm stack: duplicate and target neoverse v1 (#40369)
* e4s arm stack: duplicate and target both neoverse n1, v1

* remove neoverse_n1 target until issue #40397 is resolved
2023-10-10 14:32:51 -07:00
Adam J. Stewart
b781a530a1
GCC: fix build with Apple Clang 15 (#40318) 2023-10-10 22:35:15 +02:00
Harmen Stoppels
390b0aa25c
More helpful error when patch lookup fails (#40379) 2023-10-10 21:09:04 +02:00
Adam J. Stewart
620835e30c
py-jupyter-packaging: remove duplicate packages (#38671)
* py-jupyter-packaging: remove duplicate packages

* Allow py-jupyter-packaging to be duplicated in DAG

* Deprecate version of py-jupyterlab that requires py-jupyter-packaging at run-time
2023-10-10 13:50:22 -05:00
Adam J. Stewart
da10487219
Update PyTorch ecosystem (#40321)
* Update PyTorch ecosystem

* py-pybind11: better documentation of supported compilers

* py-torchdata: add v0.7.0

* Black fixes

* py-torchtext: fix Python reqs

* py-horovod: py-torch 2.1.0 not yet supported
2023-10-10 13:45:32 -05:00
Miroslav Stoyanov
4d51810888
find rocm fix (#40388)
* find rocm fix
* format fix
* style fix
* formatting is broken
2023-10-10 10:42:26 -07:00
Harmen Stoppels
6c7b2e1056
git: optimize build by not setting CFLAGS (#40387) 2023-10-10 11:48:06 +02:00
Carlos Bederián
749e99bf11
python: add 3.11.6 (#40384) 2023-10-10 09:53:04 +02:00
Martin Aumüller
6db8e0a61e
embree: checksum 4.3.0 (#40395) 2023-10-09 20:44:10 -06:00
Martin Aumüller
6fe914421a
rkcommon: checksum 0.11.0 (#40391) 2023-10-09 20:43:56 -06:00
Andrew W Elble
9275f180bb
openmm: new version 8.0.0 (#40396) 2023-10-09 20:33:40 -06:00
Tom Epperly
2541b42fc2
Add a new release sha256 hash (#37680) 2023-10-09 20:28:45 -06:00
Auriane R
fb340f130b
Add pika 0.19.1 (#40385) 2023-10-09 20:23:54 -06:00
Dennis Klein
d2ddd99ef6
libzmq: add v4.3.5 (#40383) 2023-10-09 17:30:46 -06:00
kenche-linaro
492a8111b9
linaro-forge: added package file for rebranded product (#39587) 2023-10-09 12:14:14 -07:00
George Young
d846664165
paintor: new package @3.0 (#40359)
* paintor: new package @3.0
* Update var/spack/repos/builtin/packages/paintor/package.py
---------

Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-10-09 09:54:44 -07:00
Vanessasaurus
31b3e4898b
Add: flux-pmix 0.4.0 (#40323)
* Automated deployment to update package flux-pmix 2023-10-05

* Pin exactly to flux-core 0.49.0 when between 0.3 and 0.4

* Update var/spack/repos/builtin/packages/flux-pmix/package.py

Co-authored-by: Mark Grondona <mark.grondona@gmail.com>

* Update var/spack/repos/builtin/packages/flux-pmix/package.py

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

---------

Co-authored-by: github-actions <github-actions@users.noreply.github.com>
Co-authored-by: Mark Grondona <mark.grondona@gmail.com>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-10-09 09:29:18 -07:00
Harmen Stoppels
82f1267486
unparse: drop python 3.3 remnants (#40331) 2023-10-09 08:22:27 -07:00
Harmen Stoppels
19202b2528
docs: update Spack prerequisites (#40381) 2023-10-09 13:41:36 +00:00
Adam J. Stewart
831cbec71f
py-pydevtool: add new package (#40377) 2023-10-09 15:09:59 +02:00
Patrick Broderick
bb2ff802e2
fftx: add v1.1.3 (#40283) 2023-10-09 15:06:59 +02:00
dependabot[bot]
83e9537f57
build(deps): bump python-levenshtein in /lib/spack/docs (#40220)
Bumps [python-levenshtein](https://github.com/maxbachmann/python-Levenshtein) from 0.21.1 to 0.22.0.
- [Release notes](https://github.com/maxbachmann/python-Levenshtein/releases)
- [Changelog](https://github.com/maxbachmann/python-Levenshtein/blob/main/HISTORY.md)
- [Commits](https://github.com/maxbachmann/python-Levenshtein/compare/v0.21.1...v0.22.0)

---
updated-dependencies:
- dependency-name: python-levenshtein
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-10-09 15:02:14 +02:00
Gavin John
3488e83deb
py-s3cmd: Add new versions (#40212)
* Add new versions of py-s3cmd

* Use correct hashes
2023-10-09 07:46:38 -05:00
Jacob King
c116eee921
nimrod-aai: add v23.9. (#40303) 2023-10-09 14:39:40 +02:00
Adam J. Stewart
9cb291b41b
py-jsonargparse: add v4.25.0 (#40185) 2023-10-09 14:33:45 +02:00
Thomas Dickerson
c0f1072dc7
racket packages: fix typo after multiple build systems support (#40088) 2023-10-09 14:21:13 +02:00
Jordan Galby
3108036533
elfutils: fix +debuginfod again with new libarchive versions (#40314) 2023-10-09 14:17:58 +02:00
Mike Renfro
215c699307
velvet: improved variants (#40225) 2023-10-09 12:47:54 +02:00
jmuddnv
f609093c6e
Adding NVIDIA HPC SDK 23.9 (#40371) 2023-10-09 12:35:59 +02:00
Joe Schoonover
eb4fd98f09
feq-parse: add v2.0.3 (#40230) 2023-10-09 12:31:23 +02:00
Harmen Stoppels
08da9a854a
parser: use non-capturing groups (#40373) 2023-10-09 07:18:27 +02:00
Mark (he/his) C. Miller
3a18fe04cc
Update CITATION.cff with conf dates (#40375)
Add `start-date` and `end-date` to citation
2023-10-08 18:04:25 -07:00
Harmen Stoppels
512e41a84a
py-setuptools: sdist + rpath patch backport (#40205) 2023-10-08 11:47:36 -06:00
Alex Richert
8089aedde1
gettext: Add static and pic options (#37957) 2023-10-08 17:42:21 +02:00
Manuela Kuhn
6b9e103305
py-tables: add 3.9.0 (#40340)
* py-tables: add 3.9.0

* Add conflict with apple-clang
2023-10-08 10:28:13 -05:00
Jen Herting
00396fbe6c
[py-tokenizers] added version 0.13.3 (#40360) 2023-10-08 10:27:18 -05:00
Jen Herting
a3be9cb853
[py-tensorboardx] Added version 2.6.2.2 (#39731)
* [py-tensorboardx] Added version 2.6.2.2

* [py-tensorboardx] flake8

* [py-tensorboardx] requires py-setuptools-scm
2023-10-08 10:21:55 -05:00
Jen Herting
81f58229ab
py-torch-sparse: add v0.6.17 (#39495)
* [py-torch-sparse] New version 0.6.17

* [py-torch-sparse] added dependency on parallel-hashmap

* [py-torch-sparse]

- spack only supports python@3.7:
- py-pytest-runner only needed with old versions
2023-10-08 10:20:46 -05:00
Jen Herting
2eb16a8ea2
[py-lvis] New package (#39080)
* [py-lvis] New package

* [py-lvis] flake8

* [py-lvis] os agnostic

* [py-lvis] added comment for imported dependency

* [py-lvis] style fix
2023-10-08 10:18:01 -05:00
Manuela Kuhn
9db782f8d9
py-bids-validator: add 1.13.1 (#40356)
* py-bids-validator: add 1.13.1

* Fix style
2023-10-08 10:16:08 -05:00
Lydéric Debusschère
633df54520
[add] py-cylc-flow: new recipe (#39986)
* [add] py-cylc-flow: new recipe

* py-cylc-flow: fix py-protobuf version

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-cylc-flow: fix py-colorama version

Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>

* py-cylc-flow: Update dependence on py-aiofiles

Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>

* py-cylc-flow: Update dependence on py-pyzmq

Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>

* py-cylcflow: remove useless dependence

* py-cylc-flow: fix indent

* py-cylc-flow: fix argument in depends_on; move lines

* py-cylc-flow: fix the type of the dependence py-setuptools

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
Co-authored-by: LydDeb <lyderic.debusschere.tgcc@cea.fr>
2023-10-08 10:06:13 -05:00
Mark (he/his) C. Miller
e2a7f2ee9a
Update CITATION.cff (#40363)
You will note the `Cite this repository` link is not working.

This commit fixes the underlying file...

* `authors` was not indented
* `authors` required by `preferred-citation`
* `authors` list required at top level (I simply duplicated)
* `"USA"` not correct country code
* `month` requires an integer month number
* Added URL to the actual pdf of the cited paper
* Used `identifiers` for doi and LLNL doc number
* added `abstract` copied from paper

Various fixes were confirmed by `cffconvert` using `docker run -v `pwd`:/app citationcff/cffconvert --validate`
2023-10-07 17:44:31 -07:00
Massimiliano Culpo
28c49930e2
Remove warning for custom module configuration, when no module is enabled (#40358)
The warning was added in v0.20 and was slated for removal in v0.21
2023-10-07 09:21:04 +02:00
Ken Raffenetti
6c1868f8ae
yaksa: add version 0.3 (#40368) 2023-10-06 22:28:15 -06:00