Commit graph

32500 commits

Author SHA1 Message Date
Manuela Kuhn
f079e7fc34
py-gevent: add 23.7.0 and py-greenlet: add 3.0.0a1 (#39164)
* py-gevent: add 23.7.0 and py-greenlet: add 3.0.0a1

* Update var/spack/repos/builtin/packages/py-gevent/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Remove version 1.3.a2

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-08-01 18:21:40 -05:00
sid
3369acc050
py-openai, py-pandas-stubs (#38912)
* simple build of py-openai

* added variants to py-openai

* py-pandas-stubs is a dependency for py-openai

* fixed format and flake8 errors for py-openai

* black format error for py-pandas-stubs

* [@spackbot] updating style on behalf of sidpbury

* made style and format changes to py-openai

* made style and format changes to py-pandas-stubs

* py-types-pytz is a dependency for py-openai

* [@spackbot] updating style on behalf of sidpbury

* updated py-openpyxl for ver 3.0.7 and 3.1.2

* Update var/spack/repos/builtin/packages/py-pandas-stubs/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* ajs requested changes for py-openai

* updated py-openpyxl for supported python

* [@spackbot] updating style on behalf of sidpbury

* updated py-openpyxl

* removed requirement.txt dependencies in  py-openpyxl

* removed python depends on from openpyxl

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-08-01 17:35:41 -04:00
mschouler
26f4fc0f34
Add two latest versions (#39182)
Co-authored-by: Marc Schouler <marc.schouler@inria.fr>
2023-08-01 15:35:55 -05:00
Weiqun Zhang
8c0551c1c0
amrex: add 23.08 (#39190) 2023-08-01 12:15:46 -07:00
Dax Lynch
59866cdb11
Mongodb: Add new package (#39085)
* Added the package

* added dependency

* Update package.py

* Update package.py

Added xz as a dependency
2023-08-01 10:25:16 -07:00
Chris White
8d2a32f66d
remove CMAKE_GENERATOR from the host-config because it cannot be overwritten on the command line (#39044) 2023-08-01 08:57:56 -07:00
vucoda
b28ae67369
Fix source bootstrapping for Debian and derivatives (#39107)
* Fix Python package.py for Debian and derivatives to find the system Python library location

When bootstrapping from source, find_library() does not contain any paths that work for Debian and derivatives.  fixes #36666

* Update to pass styling

* Update to styling

* Update python package.py with fake config value for LIBPL

* Update python package.py libpl config_vars entry to follow double quote standard

* styling update
2023-08-01 03:42:46 -04:00
Satish Balay
b8590fbd05
petsc, py-petsc4py: add v3.19.4 (#39169) 2023-07-31 20:57:18 -05:00
Martin Aumüller
9343b9524f
qt-base: add conflict for 6.5+ with GCC < 9 (#39158) 2023-07-31 18:36:16 -04:00
Adam J. Stewart
bb0cec1530
py-numpy: add v1.25.2 (#39172) 2023-07-31 16:58:07 -05:00
Alec Scott
d4f41b51f4
Add spack checksum --verify, fix --add (#38458)
* Add rewrite of spack checksum to include --verify and better add versions to package.py files
* Fix formatting and remove unused import
* Update checksum unit-tests to correctly test multiple versions and add to package
* Remove references to latest in stage.py
* Update bash-completion scripts to fix unit tests failures
* Fix docs generation
* Remove unused url_dict argument from methods
* Reduce chance of redundant remote_versions work
* Add print() before tty.die() to increase error readablity
* Update version regular expression to allow for multi-line versions
* Add a few unit tests to improve test coverage
* Update command completion
* Add type hints to added functions and fix a few py-lint suggestions
* Add @no_type_check to prevent mypy from failing on pkg.versions
* Add type hints to format.py and fix unit test
* Black format lib/spack/spack/package_base.py
* Attempt ignoring type errors
* Add optional dict type hint and declare versions in PackageBase
* Refactor util/format.py to allow for url_dict as an optional parameter
* Directly reference PackageBase class instead of using TypeVar
* Fix comment typo

---------

Co-authored-by: Tamara Dahlgren <dahlgren1@llnl.gov>
2023-07-31 21:49:43 +00:00
eugeneswalker
347acf3cc6
update py-cupy to enable ROCm builds and add variant to control optional dependencies (#38919)
* py-cupy updates: add +rocm and +all

* rocm deps are link only

* set parallelism for both +rocm and +cuda

* add missing deps; remove unnecessary deps; uncomment maintainers; get hipcc properly
2023-07-31 16:23:19 -05:00
Manuela Kuhn
65224ad6bc
py-terminado: add 0.17.1 (#39165)
* py-terminado: add 0.17.1

* Fix style

* Update var/spack/repos/builtin/packages/py-terminado/package.py

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-07-31 14:22:00 -07:00
Andrey Perestoronin
784d56ce05
added new packages (#39166) 2023-07-31 15:38:33 -04:00
Martin Aumüller
b30523fdd8
libtiff: 4.5.1 (#39159) 2023-07-31 14:15:20 -05:00
Martin Aumüller
b46e098696
libgeotiff: new versions (#39160) 2023-07-31 14:14:44 -05:00
Manuela Kuhn
20a7622602
py-rdflib: add 6.3.2 (#39065)
* py-rdflib: add 6.3.2

* Update var/spack/repos/builtin/packages/py-rdflib/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Remove python dependency

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-31 13:50:00 -05:00
mschouler
d25f1059dd
py-python-hostlist: package addition (#39035)
* Add recipe for py-hostlist

* Fix style

* Fix style

* Add homepage, fix version url and remove unnecessary dependency

* Fix version and remove url

* Rename package and fix git link

---------

Co-authored-by: Marc Schouler <marc.schouler@inria.fr>
2023-07-31 12:39:56 -05:00
Adam J. Stewart
9394fa403e
Remove Xcode mock-up (#39020)
* Remove Xcode mock-up

* Remove unused imports
2023-07-31 10:24:04 -07:00
Alec Scott
679c6a606d
fzf: add v0.42.0 (#39150) 2023-07-31 09:55:48 -07:00
Adam J. Stewart
27f378601e
py-lightning: add v2.0.6 (#39152) 2023-07-31 09:54:35 -05:00
Adam J. Stewart
832ddbdf6d
py-sphinx: add v7.1 (#39151) 2023-07-31 09:54:10 -05:00
Martin Aumüller
0286455e1d
libjpeg-turbo: checksum 2.1.5.1 & 3.0.0 (#39157) 2023-07-31 07:48:48 -07:00
Adam J. Stewart
4baf489460
py-lightly: add v1.4.14 (#39153) 2023-07-30 19:07:54 -07:00
Christopher Christofi
56c7921430
py-chex: add 0.1.5 (#39102) 2023-07-30 16:30:36 -05:00
Manuela Kuhn
c2288af55c
py-csvkit: add 1.1.1 (#39124) 2023-07-30 16:28:33 -05:00
George Young
39cd2f3754
sourmash: new package @4.8.2 (#38571)
* sourmash: new package @4.8.2

* sourmash: new package @4.8.2

* py-bitarray: add 2.7.6, 2.7.4

* Update var/spack/repos/builtin/packages/py-bitstring/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update setuptools dependency

* Adding missing deps

* Update var/spack/repos/builtin/packages/sourmash/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Correcting maturin dep

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/sourmash/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/sourmash/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/sourmash/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Adding dependency types

* Add `@0.14.17` as the last pre-`@1:` release

* Switch to use `python_platlib`

* Update package.py

* Update var/spack/repos/builtin/packages/py-screed/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-30 16:13:25 -05:00
Adam J. Stewart
a941ab4acb
PyPy: add new package (#38999)
* PyPy: add new package

* Typo fix

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-07-30 15:54:45 -05:00
Jordan Galby
048cc711d6
py-pytest-html: Add version 3.2.0 (#38989)
* py-pytest-html: add 3.2.0

* py-pytest-html: Add py-py version requirement

See https://github.com/pytest-dev/pytest-html/blob/v3.2.0/setup.py#L16

* py-pytest-html: Add dependencies from setup.py and pyproject.toml

* py-pytest-html: Add git url

* py-pytest-html: Add conflict with py-pytest@7.2: pending py-pytest-html@4
2023-07-30 15:01:00 -05:00
Tamara Dahlgren
63a5cf78ac
Bugfix/ltrace: Add missing elf dependency (#39143) 2023-07-29 23:02:00 -07:00
Filippo Spiga
bef03b9588
Adding NVIDIA HPC SDK 23.7 (#39127) 2023-07-28 18:48:06 -04:00
dslarm
2859f0a7e1
HACCKernels git repository has changed URL. Updating. (#39129) 2023-07-28 16:33:52 -04:00
afzpatel
c1b084d754
Adding optional hip test (#34907)
* Adding optional hip test
* Modifications to run every samples test
* Skipping test directories without a Makefile
* fix styling and cleaning code
* fix styling and changed method of itterating through sample folders
* changed to new syntax for standalone tests
* Updates for changes in syntax
2023-07-28 10:10:29 -07:00
Julien Bigot
a8301709a8
libffi: add -Wno-error=implicit-function-declaration for clang >= 16 (#38356) 2023-07-28 10:18:12 -04:00
Fabien Bruneval
ad0b70a64a
MOLGW package: fix dependence to threaded MKL (#39028)
* molgw package.py

* molgw package.py almost ready

* bug fix in molgw package.py

* MOLGW v3.2

* black pass

* duplicated line eliminated

* remove FIXME in the header

* add me as a maintainer

* fix previous commit

* sort the imports in the order spack wants

* chop the too-long lines

* many fixes

- variants before dependences
- eliminate useless build and install stages
- no openmp with intel-mkl was broken

* after blackization

* cleaning

* Update var/spack/repos/builtin/packages/molgw/package.py

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>

* Update var/spack/repos/builtin/packages/molgw/package.py

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>

* Update var/spack/repos/builtin/packages/molgw/package.py

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>

* Update var/spack/repos/builtin/packages/molgw/package.py

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>

* Update var/spack/repos/builtin/packages/molgw/package.py

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>

* use threaded mkl when openmp is triggered

---------

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-07-28 08:30:27 -04:00
Matthias Wolf
b5444e4304
py-distributed: add missing tblib dependency. (#39123)
I noticed this as we run a `pip check` on all modules we generate. This
dependeny seems to have been around for a long time:

https://github.com/dask/distributed/blob/2020.12.0/requirements.txt#L8
https://github.com/dask/distributed/blob/2023.4.1/pyproject.toml#L39

While it does not seem essential, it would be nice to have consistent
installations by including the missing dependency.
2023-07-28 05:42:35 -04:00
Michael Kuhn
e1d5d34b56
gcc: add 13.2.0 (#39119) 2023-07-28 10:36:07 +02:00
Brian Van Essen
e5b4607548
Added support for building with Caliper (#39116) 2023-07-27 13:59:11 -07:00
Brian Van Essen
ecdd8e035c
Added the import of the regex package (#39117) 2023-07-27 13:53:40 -07:00
snehring
9d9e4a52f5
tecio: adding new package tecio (#39099) 2023-07-27 12:26:25 -07:00
Aiden Grossman
9e0629213c
lm-sensors: respect compiler choice (#38890)
Currently lm-sensors defaults to the compiler specified in the Makefile
(gcc) rather than the one specified in the spec. This patch appends the
CC flag to the make invocation with the spec compiler to fix this
behavior.
2023-07-27 19:58:21 +02:00
Matthieu Dorier
51fa4e5fc4
mochi-margo: added version 0.14.1 (#39110) 2023-07-27 10:17:08 -07:00
Sreenivasa Murthy Kolam
8908b7584e
Updates to rocm recipes for rocm-5.5.0 and rocm-5.5.1 releases (#37910)
* initial commit for rocm-5.5.0 release
* fix the hipsparse  build error for 5.5.0
* fix build error for amrex .add hiprand as a dependency
* modify the patch for rocprofiler-dev
* add hiprand for +rocm build
* initial commit for rocm-5.5.1 release
* bump up the version for rocm-5.5.1 release.
* bump up the version for rocmlir.miopen to use this backend only till 5.5
* add new recipe py-barectf and add it as dependency for rocprofiler-dev
* revert the changes for rocprofiler-dev for 5.5.0/1 for now as it depends
  on hsa-amdaqlprofile.so which is a closed source and no spack recipe is
  available for now.
* add rocm-core as dependency for rocm packages from 5.5.0 onwards
* avoid download of the gtest for building unit tests
2023-07-27 09:42:17 -07:00
Aiden Grossman
936c6045fc
ROCm packages: remove build type variants (#39089)
After #36679, the default build type is Release, so there is no need to
explicitly set the build type as a custom variant.
2023-07-27 08:08:59 +02:00
David Boehme
ca2e9cf090
Caliper: Add variorum variant (#39104) 2023-07-26 19:22:36 -04:00
Gerhard Theurich
288b3c3ec2
esmf: add v8.5.0 (#39100) 2023-07-26 16:08:03 -07:00
David Boehme
31bb259a12
Add Caliper v2.10.0 (#39103) 2023-07-26 16:05:08 -07:00
Konstantinos Parasyris
a74dd96773
Adds AMS package.py (#39083)
Co-authored-by: koparasy <parasyris1@llnl.com>
Co-authored-by: Loic Pottier <pottier1@llnl.gov>, Tom Stitt <stitt4@llnl.gov>
2023-07-26 15:59:38 -07:00
Matthieu Dorier
9594fb47e1
mruby: added mruby package (#39093)
* mruby: added mruby package
* mruby: replaced / with os.path.join
* mruby: improving style
* mruby: improving style again
2023-07-26 10:06:16 -07:00
Matt Drozt
62cfe1ab47
Create a package for the redis ai module (#39096) 2023-07-26 12:58:25 -04:00