Commit graph

656 commits

Author SHA1 Message Date
Mike Nolta
2ba6bb21fb fix #249 (tmp spack-stage directories conflict) 2015-12-21 18:50:58 -05:00
Todd Gamblin
73ea15db8e Merge pull request #208 from epfl-scitas/features/resource_directive
resource directive : implementation + clang / llvm use case
2015-12-21 10:34:16 -08:00
Todd Gamblin
dccfcd10f7 Merge pull request #255 from LLNL/bugfix/254-libtool-compiler-name-issues
Fix #254: libtool & distutils want certain compiler names.
2015-12-20 16:56:59 -08:00
Todd Gamblin
1b086c928c Merge pull request #227 from trws/fetch-deps
fetch: add options to fetch missing or all deps
2015-12-19 21:02:42 -08:00
Todd Gamblin
9edba18489 Merge pull request #230 from nolta/fix-env-mod-sys-type
fix environment module path when $SYS_TYPE isn't defined
2015-12-19 20:59:13 -08:00
Todd Gamblin
32f96b5c73 Fix stale code in python version test so that it actually works. 2015-12-19 20:04:00 -08:00
Mike Nolta
429e15c4a6 spack python: add -c option
Allows passing program in as a string. Example:

    $ spack python -c 'print 2+3'
    5

Also imports spack module by default into the environment.
2015-12-19 16:32:17 -05:00
Gregory Lee
df5dc1c9bb Merge pull request #253 from LLNL/bugfix/244-uninstall-errors
Bugfix/244 uninstall errors
2015-12-19 08:06:36 -08:00
Todd Gamblin
7cc4d88726 Fix #254: libtool & distutils want certain compiler names.
This changes the compiler wrappers so that they are called by the same
name as the wrapped compiler.  Many builds make assumptions about
compiler names, and we need the spack compilers to be recognizable so
that build systems will get their flags right.

This adds per-compiler subdirectories to lib/spack/spack/env directory
that contain symlinks to cc for the C, C++, F77, and F90
compilers. The build now sets CC, CXX, F77, and F90 to point to these
links instead of to the generically named cc, c++, f77, and f90
wrappers.
2015-12-19 02:06:47 -08:00
Todd Gamblin
52e3364efa Fix #244: errors on uninstall
- Extension logic didn't take conditional deps into account.

- Extension methods now check for whether the extnesion is
  in the extendee map AND whether the dependency is actually present
  in the spec yet.
2015-12-18 22:24:35 -08:00
Todd Gamblin
b7e926eef6 minor formatting. 2015-12-18 22:24:22 -08:00
Todd Gamblin
ce8bd20944 Fix import error. 2015-12-18 22:23:51 -08:00
Todd Gamblin
abd3d3946d Format to 80 char width. 2015-12-18 19:23:45 -08:00
Gregory Lee
9cab88071b Merge pull request #239 from LLNL/bugfix/238-db-specs-not-concrete
Fix #238: Database specs need to be concrete when read in as well.
2015-12-16 11:37:51 -08:00
Mike Nolta
82aa366adf minor comment tweak in modules.py 2015-12-16 11:43:07 -05:00
Todd Gamblin
2f9ee88408 Fix #238: Database specs need to be concrete when read in as well. 2015-12-15 17:15:37 -08:00
Todd Gamblin
6e074a196a Fix #206: need to make deps AND root concrete when read in. 2015-12-14 21:06:32 -08:00
Todd Gamblin
afbd0e77d0 Make internal hash dep sort order match external one. 2015-12-11 16:47:34 -08:00
Todd Gamblin
3dd6cbc556 Fix #217: update spec_dag test for new _cmp_key. 2015-12-11 13:07:20 -08:00
Todd Gamblin
6ee2eb21dd Fix #217: Use MUCH faster hashing, reduce number of DAG copies.
This changes the hash algorithm so that it does much less object
allocation and copying, and so that it is correct.

The old version of `_cmp_key()` would call `sorted_deps`, which would
call `flat_dependencies` to get a list of dependencies so that it
could sort them in alphabetical order.  This isn't necessary in the
`_cmp_key()`, and in fact we want more DAG structure than that to be
included in the `_cmp_key()`.

The new version constructs a tuple without copying the Spec DAG, and
the tuple contains hashes of sub-DAGs that are computed recursively
in-place.  This is way faster than the previous algorithm and reduces
the numebr of copies significantly. It is also a correct DAG hash.

Example timing and copy counts for the different hashing algorithms
we've tried:

Original (wrong) Spec hash:
```
106,170 copies
real    0m5.024s
user    0m4.949s
sys     0m0.104s
```

Spec hash using YAML `dag_hash()`:
```
3,794 copies
real    0m5.024s
user    0m4.949s
sys     0m0.104s

New no-copy, no-YAML hash:
```
3,594 copies
real    0m2.543s
user    0m2.435s
sys     0m0.104s
```

So now we have a hash that is correct AND faster.

The remaining ~3k copies happen mostly during concretization, and as
all packages are initially loaded.  I believe this is because Spack
currently has to load all packages to figure out virtual dependency
information; it could also be becasue there ar a lot of lookups of
partial specs in concretize.  I can investigate this further.
2015-12-11 12:40:27 -08:00
Todd Gamblin
7526a89463 Fix #217: Make package cache use DAG hash instead of sorted deps.
- Gets rid of last vestige of old-style specs.
- Uses new hashing for lookup
2015-12-11 02:17:17 -08:00
Tom Scogland
281a869ef6 fix path resolution for mirror packages, especially with dependency fetching 2015-12-10 09:24:01 -08:00
Tom Scogland
786f4cd2c2 add dependency fetching to mirror creation 2015-12-10 08:32:51 -08:00
Tom Scogland
25f2b01a3c fetch: add options to fetch missing or all deps
Small additions to fetch to make it easier to fetch all files necessary for a
build on a system without network connectivity.
2015-12-10 07:27:06 -08:00
alalazo
20e67bc5e6 clang : solve the issue with missing default include paths for OpenMP and libc++
resource : support for finer grained linking of resources
2015-12-09 17:15:26 +01:00
Todd Gamblin
537451f0b1 bugfix: doc build needed additional sys.path due to externals change. 2015-12-09 01:32:12 -08:00
Todd Gamblin
c41b9b7ddc Change github.com/scalability-llnl to github.com/llnl everywhere. 2015-12-09 01:24:15 -08:00
Massimiliano Culpo
50bd4d2e4e mirror : deals correctly with variants that optionally enable resources (if they are archive URLs) 2015-12-03 11:21:11 +01:00
Massimiliano Culpo
39a3cfd4d9 reource directive accepts 'basename' keyword
llvm : libc++ variant
2015-12-02 12:24:37 +01:00
Massimiliano Culpo
4b2168ab8e resources : added missing check after fetch 2015-12-02 10:13:39 +01:00
Massimiliano Culpo
b85dccca92 resources : added error handling for destination keyword on resource directive 2015-12-01 15:12:26 +01:00
Massimiliano Culpo
d3d9b5401b resources : changed name of stage folder 2015-12-01 13:26:44 +01:00
Massimiliano Culpo
a075d581ef resource : fetch strategy constructed from kwargs instead or hardcoded URLFetchStrategy 2015-12-01 12:56:46 +01:00
Todd Gamblin
7383bd393e Fixed bug #42: problem with satisfies() for virtual dependencies.
- _cross_provider_maps() had suffered some bit rot (map returned was
  ill-formed but still worked for cases with one vdep)

- ProviderIndex.satisfies() was only checking whether the result map
  was non-empty.  It should check whether all common vdeps are *in*
  the result map, as that indicates there is *some* way to satisfy
  *all* of them.  We were checking whether there was some way to
  satisfy *any one* of them, which is wrong.

- Above would cause a problem when there is more than one vdep provider.

- Added test that covers this case.

- Added `constrained()` method to Spec. Analogous to `normalized()`:
  `constrain():constrained() :: normalize():normalized()`
2015-11-27 23:06:18 -08:00
Massimiliano Culpo
1fe626ec7c resource directive : sketch of implementation + clang / llvm use case 2015-11-26 17:53:33 +01:00
Todd Gamblin
cf3d236b9f Merge branch 'scheibelp-features/externaldeps' into develop 2015-11-23 17:50:49 -08:00
Todd Gamblin
1447fd0a12 Merge pull request #160 from SteVwonder/stevwonder/develop
Fixed -l flag for 'spack extensions'
2015-11-23 15:50:18 -08:00
Tom Scogland
5e93dd6592 modified warning to reference spack clean
clean --dist has been removed, command fixed to something that works.
2015-11-20 11:49:46 -08:00
Stephen Herbein
9c30e0210b Fixed -l flag for 'spack extensions' 2015-11-12 08:15:38 -08:00
Peter Scheibel
6d7b26d4e0 Insert lib/spack/external into sys.path. This avoids cases where the system
python install and lib/spack/external have the same library installed. This
requires modifying the names of some modules in lib/spack/external in cases
where both the system python and backported features of future python versions
(i.e. after 2.6) are used (previously distinguished by "from external import X"
and "import X").
2015-11-11 18:04:22 -08:00
Todd Gamblin
0d993947ee Fix SPACK-93, SPACK-94, GitHub #150
- `remove_prefix` was modified to remove from the DB, but the package
  may not have been added to the DB yet when `remove_prefix` is called
  from `cleanup`.

- Made `remove_prefix` a pure utility function (it just removes the prefix)

- Added `installed_db.remove()` call only after the `remove_prefix` in
  `uninstall`.
2015-11-04 16:44:33 -08:00
Todd Gamblin
339da1da3d Make architecture reflect OS *and* machine. Use Python's platform module. 2015-11-04 07:46:17 -08:00
Massimiliano Culpo
6db2a58008 Fixed typo : write_lock() -> write_transaction() 2015-10-30 07:42:58 +01:00
Todd Gamblin
a1c42c2753 Merge Greg Becker's build database support into develop. 2015-10-29 02:22:20 -07:00
Todd Gamblin
671faa4b99 Merge pull request #124 from scheibelp/features/testinstall-cmd
Features/testinstall cmd
2015-10-29 00:16:52 -07:00
Todd Gamblin
ed0c80e1cb Merge pull request #145 from markcmiller86/v-char-bugfix
generalize one of the cases to handle many more kinds of formatting o…
2015-10-29 00:02:01 -07:00
Todd Gamblin
fec6674597 Merge pull request #139 from mathstuf/use-uname-for-arch
architecture: use uname if available
2015-10-29 00:01:30 -07:00
miller86
21e9d5c5c3 generalize one of the cases to handle many more kinds of formatting options 2015-10-27 17:05:27 -07:00
Todd Gamblin
a58ae0c5d0 Build database working with simple transaction support; all tests passing. 2015-10-27 16:36:44 -07:00
Todd Gamblin
bf8479bec6 Fix stupid lock bug.
- Code simplification ignored case where exception was raised.
- If LockError was raised, read and write counts were incremented erroneously.
- updated lock test.
2015-10-27 16:34:26 -07:00