Commit graph

14974 commits

Author SHA1 Message Date
Michael Kuron
7f01d1dc40
py-ase: add a build dependency on py-setuptools (#22078) 2021-03-04 18:09:37 +01:00
darmac
e9dfc50d1b
py-sqlparse: add v0.4.1 (#22080) 2021-03-04 17:44:33 +01:00
Dr. Christian Tacke
04cd884c95
poke: new package at v1.0 (#22085) 2021-03-04 17:41:48 +01:00
Dr. Christian Tacke
71954d9665
xrootd: add v5.1.0 (#22084) 2021-03-04 17:39:58 +01:00
Tomoyasu Nojiri
d7dd12edab
unifyfs: Fix strncpy build error of version 0.9.1 (#22066) 2021-03-04 07:46:18 -08:00
Axel Huebl
49c015e391
BLAS++: CUDA default (false) (#22067)
For opt-in packages in Spack, its common that the `cuda` variant
is disabled by default.

This also simplifies downstream usage in multi-variants for
backends in user code.
2021-03-04 12:07:48 +01:00
Mosè Giordano
7e143bab6a
libblastrampoline: Add version 3.0.2 (#22065) 2021-03-04 11:05:32 +01:00
darmac
f1d0a819e9
py-adb-enhanced: update version to fix runtime error (#22036)
* py-adb-enhanced: update version to fix runtime error

* py-adb-enhanced: fix dependencies
2021-03-03 20:57:41 -06:00
Andrew W Elble
631598014a
py-pycuda: new version 2020.1 (#22057)
* py-pycuda: new version 2020.1

* dep updates

* deal with lib/lib64 issue
2021-03-03 22:06:02 +00:00
Frédéric Simonis
6d54df1ba4
precice: add pkgconfig as a build dependency (#22059) 2021-03-03 17:10:00 +00:00
Anton Kozhevnikov
58d9f5c114
libxc: add v5.1.2 (#22056) 2021-03-03 16:52:41 +00:00
ajaust
ac66624196
py-pyprecice: Add version 2.1.1.2 and 2.2.0.1 (#22012) 2021-03-03 07:44:04 -06:00
Adam J. Stewart
d343304bdc
py-pandas: add v1.2.3 (#22048) 2021-03-03 14:31:22 +01:00
Massimiliano Culpo
796588b2fd
zig: add new package at v0.7.1 (#22046) 2021-03-03 13:30:41 +01:00
Olivier Cessenat
25fb753cd2
New Package: keepassxc (#21878) 2021-03-02 18:37:18 -08:00
Mark Olesen
0c38c86403
openfoam: disable FPE handling for Fujitsu compiler (#21769)
- as outlined in merge-request #21336 some clang compilers
  can trigger erroneous floating point exceptions.

  OpenFOAM normally traps FPE, but disable this in the etc/controlDict
  for specific compilers:

      change "trapFpe digit;" -> "trapFpe 0;"

  Eliminate previous use of FOAM_SGIFPE env variable in favour of
  using the etc/controlDict setting - cleaner and robuster.

Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2021-03-02 22:01:20 +01:00
rexcsn
16c07e6abd
aws-parallelcluster v2.10.2 (#22047)
Signed-off-by: Rex <shuningc@amazon.com>
2021-03-02 13:55:49 -06:00
Desmond Orton
8e1b62ee68
New package at r-spades at 2.0.6 (#21784) 2021-03-02 11:10:02 -07:00
Dr. Christian Tacke
c7306db061
geant4(-data): Add version 10.7.1 (#22044)
Notably, this patch release adds a new version of
g4particlexs.
2021-03-02 16:57:46 +00:00
Seth R. Johnson
136fa9c203
vecgeom: add v1.1.12 (#22041) 2021-03-02 14:29:16 +00:00
Harmen Stoppels
dc5022a9d9
openssl: introduce ~docs to make installation smaller (#21962) 2021-03-02 14:58:59 +01:00
Phil Carns
eeff906ccc
bmi: update url and repo location (#21992) 2021-03-02 10:38:52 +00:00
Phil Carns
ae19ddbfcb
mochi-margo: the official repo is on github now (#22029) 2021-03-02 10:28:33 +00:00
Eisuke Kawashima
1e0d311547
dftd4: add new package at v3.1.0 (#22007) 2021-03-02 10:11:45 +00:00
Massimiliano Culpo
61e00ac1e1
nim: add v1.4.4 (#22004) 2021-03-02 09:42:05 +00:00
a-saitoh-fj
71df23406d
eigenexa : use an interpreter explicitly to execute test script (#21896) 2021-03-02 10:02:56 +01:00
ketsubouchi
60e64bac0a
virtuoso: add new package (#21793) 2021-03-02 09:50:49 +01:00
Olivier Cessenat
880bb06cbf
octave: provides fltk with opengl, adds qscintilla (#21903) 2021-03-02 09:47:00 +01:00
h-denpo
fac785914b
py-fava: Removed the importlib dependencyfrom py-fava. (#22035)
It isn't needed.
2021-03-01 23:10:02 -06:00
h-denpo
9575531f2a
py-importlib: Python 2.7 is needed to build. (#22034)
* py-importlib: Python 2.7 is needed to build.

added     depends_on('python@2.7.0:2.7.99')

* Update var/spack/repos/builtin/packages/py-importlib/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-03-01 23:09:31 -06:00
h-denpo
83ca1b153f
py-azureml-dataprep-rslex: install only x86_64 (#22033)
* py-azureml-dataprep-rslex: install only x86_64

* py-azureml-dataprep-rslex:  Moved the conflit part.
2021-03-02 03:39:56 +00:00
Desmond Orton
671878740c
Version update with url to checksum all versions (#22027) 2021-03-01 16:23:49 -08:00
Paul Ferrell
88f7a00f2d
Paraview compatibility with PugiXML varies by version. (#21732) 2021-03-01 16:06:34 -08:00
Ethan Stam
b2e0bc1ae7
paraview: add python to rpath (#21768) 2021-03-01 16:00:44 -08:00
Paul
bd94458552
Added Go versions 1.16 and 1.15.8 (#22016) 2021-03-01 15:22:12 -08:00
eugeneswalker
36ae5ac6ef
kokkos package: +cuda requires +wrapper when compiler is not clang (#21941)
This check is performed in cmake_args rather than with a 'conflicts'
statement because matching on !clang (i.e. any compiler that is not
clang) cannot currently be done with our spec syntax.
2021-03-01 14:54:14 -08:00
mic84
d7595d6703
amrex: new version 21.03 (#22028) 2021-03-01 14:46:37 -08:00
ketsubouchi
f1ef260b47
alps: add smoke test (#21834) 2021-03-01 14:40:01 -08:00
Andrew W Elble
4d37b384f5
py-torch-geometric: new version 1.6.3 (#22024)
* py-torch-geometric: new version 1.6.3

* setuptools
2021-03-01 20:33:23 +00:00
Simon Frasch
df42c0b4b6
spla: added version 1.3.0 (#22013) 2021-03-01 20:15:16 +00:00
Andrew W Elble
f5beee76c8
py-tensorboardx: update package (#22026)
v2.1
2021-03-01 13:58:29 -06:00
Andrew W Elble
20fdab7f02
py-yacs: new package (#22020) 2021-03-01 13:56:54 -06:00
mic84
651df70213
amrex: must use AMReX_CUDA_ARCH for version > 20.11 (#22025) 2021-03-01 11:45:04 -08:00
William Downs
1ac2cc5081
intel-mpi: add version 2019.9.304 and 2019.10.317 (#22017) 2021-03-01 11:40:41 -08:00
Andrew W Elble
81b77873e7
py-lap: new package (#22021)
* py-lap: new package

* dep versions
2021-03-01 19:24:36 +00:00
Andrew W Elble
987b5a5b6f
py-motmetrics: new package (#22023)
* py-motmetrics: new package

* dep updates
2021-03-01 19:03:03 +00:00
Andrew W Elble
1abfebb5e9
py-cython-bbox: new package (#22022)
* py-cython-bbox: new package

* pypi url fix
2021-03-01 19:01:57 +00:00
Mark W. Krentel
14c1d58b5a
binutils: add versions 2.35.2 and 2.36.1 (#22019)
Starting with 2.36, the Makefiles are missing some dependencies for
linking libctf and thus require serial make install.
2021-03-01 08:53:55 -08:00
AMD Toolchain Support
afb7e57d20
ucx: added variants to support IB, mlx etc (#21876)
Co-authored-by: mohan babu <mohbabul@amd.com>
2021-03-01 16:11:37 +01:00
Adam J. Stewart
c529ccaab0
py-geopandas: add v0.9.0 (#22005) 2021-03-01 14:35:16 +01:00
h-denpo
890a93bbcd
gchp: patch for aarch64 (#22010) 2021-03-01 09:06:08 +01:00
Mosè Giordano
62f8087716
libblastrampoline: Add version 3.0.1 (#22002) 2021-02-27 18:31:59 +01:00
Robert Pavel
d5f50203d1
Removed MPI variant from ebms (#21938) 2021-02-27 13:15:57 +01:00
iarspider
5abc7e59d1
Rivet updates and improvements (#21843) 2021-02-27 13:13:08 +01:00
iarspider
edeb6c52f0
Openblas: add experimental BIGNUMA flag (#21393) 2021-02-27 13:06:29 +01:00
Adam J. Stewart
ede100bf16
kcov: elfutils not needed on macOS (#21993) 2021-02-26 19:25:59 -06:00
Satish Balay
a87aa49fbf
petsc/petsc4py/slepc: switch default git branch from 'master' to 'main' (#22001) 2021-02-27 01:17:37 +00:00
Sebastian Mobo
4f84721dc1
boost: Patch B2 bootstrap step to use correct toolchain (#21408) 2021-02-26 17:46:37 -06:00
Andrew W Elble
f2f58b70b1
nccl-tests: respect cuda_arch variant during build (#21995) 2021-02-26 15:38:20 -08:00
Ryan Viertel
f957f1936c
adds flag to turn off NLOPT_OCTAVE in CMAKE when -octave (#21997) 2021-02-26 15:35:09 -08:00
Desmond Orton
5492e549a5
New package r-spades-tools at 0.3.6 (#21783) 2021-02-26 23:25:47 +00:00
eugeneswalker
590457cf7f
amrex: use right cmake_args for @develop; depends_on(hypre) for link (#21892)
* amrex package: use right cmake_args for @develop; depends_on(hypre)

* add explicit depends_on for petsc, for link, when +petsc
2021-02-26 13:53:31 -08:00
mic84
2fd8612f21
amrex: +hypre and +petsc do not need +fortran from version 20.08 (#21994) 2021-02-26 13:52:57 -08:00
Desmond Orton
f22caeca36
Package/r circstats (#21966) 2021-02-26 14:57:56 -06:00
iarspider
1a45bdb036
FastJet: fix patch level (#21936) 2021-02-26 19:21:08 +00:00
Adam J. Stewart
a6396d6190
py-metpy: add new package (#21971) 2021-02-26 18:51:16 +00:00
Olivier Cessenat
2484ed0281
Qscintilla: added v2.12.0, fixed build (#21902) 2021-02-26 18:13:25 +00:00
Olivier Cessenat
5578c07b51
asciidoc: sourceforge a2x needs python2, adds more recent for py3 (#21807)
* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: making python 2.3 to 2.7 able to cope with asciidoc

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3
2021-02-26 10:04:36 -06:00
Adam J. Stewart
046861c4ef
xkbcomp: add v 1.4.4 (#21981) 2021-02-26 15:55:06 +00:00
Dan Lipsa
18f094efe9
sensei: add versions and fix dependencies (#21452)
* Fix sensei@develop

Should work with all options but libsim.
Current releases don't work with ~catalyst
See
https://gitlab.kitware.com/sensei/sensei/-/merge_requests/240
for the fix for develop.
Current releases work only with paraview 5.7 and 5.6
See
https://gitlab.kitware.com/sensei/sensei/-/merge_requests/239
for the fix for develop (which works with 5.9)

* Fix libsim.

* Fix warnings.

* Fix python runtime.

* Many changes:

* Reworked cmake options top use the CMakePackage option helpers
* Simplified and consolidated options
* Replaced adios with adios2 variant
* Added vtkm variant (not yet working)

* paraview: Fix downstream consumers getting the wrong FindMPI

* vtk: Fix downstream consumers getting the wrong FindMPI

* Add +ascent, +adios2; remove +adios; variants off by default

* Fix catalyst python logic

* sensei: cleanup formatting

Co-authored-by: Chuck Atkins <chuck.atkins@kitware.com>
2021-02-26 10:52:41 -05:00
Tomoyasu Nojiri
b6ac3bb6d7
ncl: allow building on aarch64 (#21984) 2021-02-26 15:39:08 +00:00
eugeneswalker
c2784b2d41
amr-wind: new package (#21883)
* amr-wind: new package

* amr-wind: simplify cuda_arch mapping

* simplify
2021-02-26 07:15:08 -08:00
Tomoyasu Nojiri
5900bf6890
warpx: fix typos in a few dependency conditions (#21982) 2021-02-26 11:15:46 +00:00
Harmen Stoppels
459171b973
berkeley-db: do not install docs by default (#21960)
* Add an option to not install 100MB of docs

* Add deprecations of versions that are removed and add conflicts for 5.3
2021-02-26 10:44:14 +01:00
Adam J. Stewart
7cfde8f514
py-xarray: add new variant 'io' (#21945) 2021-02-26 10:41:14 +01:00
Adam J. Stewart
b4520676dd
c-blosc: add v1.21.0 (#21968) 2021-02-26 10:33:39 +01:00
Adam J. Stewart
2e178be890
Python: add new versions (#21969) 2021-02-26 10:31:57 +01:00
Adam J. Stewart
f87f006e7b
py-importlib-resources: add v5.1.0 (#21970) 2021-02-26 10:31:36 +01:00
Adam J. Stewart
229c6ae277
py-pooch: add new package (#21972) 2021-02-26 10:30:18 +01:00
Axel Huebl
46905bb445
openPMD-api: use cmake helpers (#21973)
Modernize the `openpmd-api` package to use fancy new `CMakePackage`
helpers when setting options from variants :-)
2021-02-26 10:29:52 +01:00
Erik Schnetter
f28ca41d02
hwloc: add v2.4.1 (#21978) 2021-02-26 10:19:32 +01:00
h-denpo
19d34b0afa
dbow2: add a dependency on eigen (#21663) 2021-02-26 10:19:03 +01:00
eugeneswalker
e88fc38cfe
hypre: enable cuda variants (#21885) 2021-02-26 10:17:35 +01:00
Harmen Stoppels
27ef9f0e07
CMake: add a "build_type" variant (#21958)
This permits to use MinSizeRel or other build types
where they are a better fit.
2021-02-26 09:49:00 +01:00
ketsubouchi
b13a506090
cpmd: add expected smoke test check output (#21668) 2021-02-26 09:29:10 +01:00
Gregory Lee
6c12b64873
added waylaynd-protocols package (#21979) 2021-02-26 07:24:53 +00:00
Glenn Johnson
c6413c8925
Revert "New package r-circstat@0.2-6 (#21777)" (#21974)
This reverts commit 61c8bc2b19.
2021-02-26 03:39:58 +00:00
Daryl W. Grunau
55eae72bb0
pegtl: manage options to build examples and tests when run_tests (#21866)
Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
2021-02-25 17:06:02 -08:00
Michael Kuron
4453058862
Old concretizer: prevent unexpected propagation of external config (#20976)
When using an external package with the old concretizer, all
dependencies of that external package were severed. This was not
performed bidirectionally though, so for an external package W with
a dependency on Z, if some other package Y depended on Z, Z could
still pull properties (e.g. compiler) from W since it was not
severed as a parent dependency.

This performs the severing bidirectionally, and adds tests to
confirm expected behavior when using config from DAG-adjacent
packages during concretization.
2021-02-25 15:42:40 -08:00
Valentin Churavy
476444c592
[flux-core] add -Wno-errpr=maybe-uninitialized (#21943)
Co-authored-by: Stephen Herbein <SteVwonder@users.noreply.github.com>
2021-02-25 22:55:42 +00:00
Desmond Orton
87dd060c20
New package r-spades-addins at 0.1.2 (#21781) 2021-02-25 22:12:54 +00:00
Andrew W Elble
8071be81c4
py-tensorflow: disable h5py/hdf5 mpi variant(s) if tensorflow is ~mpi (#21955) 2021-02-25 22:08:00 +00:00
eugeneswalker
e8f51c6892
tioga: add variants: +cuda and more (#21884) 2021-02-25 12:47:01 -08:00
Sergey Kosukhin
177117745f
hdf5: drop support for libtool files (#21900) 2021-02-25 20:41:41 +00:00
Michael Kuhn
0754d101d2
meson: add 0.57.1 (#21959) 2021-02-25 20:29:56 +00:00
Harmen Stoppels
e25a7be5b8
openmpi: add perl as a build dependency (#21956) 2021-02-25 19:00:43 +00:00
Axel Huebl
d05e0dfeef
WarpX: CMake (#21787)
* New Package: py-picmistandard

* New Package: py-warpx

* WarpX: Transition to CMake
2021-02-25 19:54:52 +01:00
Adam J. Stewart
62662591ea
py-pydap: add new package (#21948) 2021-02-25 12:13:21 -06:00
Olivier Cessenat
b48de4baa7
harfbuzz: dependency assumed cairo was compiled with +pdf and +ft (#21954) 2021-02-25 17:42:57 +00:00
h-denpo
f0e5c96746
libpulsar: added dependency on curl (#21950) 2021-02-25 13:39:38 +00:00