Update older md5 checksums to sha256. Require CMake >= 3.6.0 (updated
from 3.5.0). Remove some third-party depends_on statements (which
were commented out before).
Extract implicit xenv dependency into a new package and add it as an
explicit dependency. Update Gaudi to explicitly depend on older
versions of xenv rather than the latest develop because that
conflicts with Spack's compiler wrappers.
The nvptx installation support phase (added in 040b658) was always
running for gcc regardless of whether +nvptx was enabled. This
removes the "@when" syntax (which apparently is not working) and
adds a check inside of the "nvptx_install" function to bail out if
+nvptx is not enabled.
On macOS, the build of libxxhash is performed by a bare `make`
launched by `MakePackage`s default `build` phase. As `prefix`
is not set at this point, the library gets compiled with a hard-coded
install name of `/usr/local/libxxhash.dylib`. Downstream clients,
in the tested case Root, will then fail to build as the install name
is incorrect.
Move setting of `prefix` from `install` to `edit` so that it
propagates to subsequent `build` and `install` phases.
* QE hdf5 is now a multi-valued variant. Update conflicts accordingly.
* Update dependencies for hdf5 multi-valued variant. Bug fix: high-level hdf5 library needs to be a hard dependecy.
* Support for HDF5 serial interface. Note that this is not supported in QE autoconf, but will be fixed in the next official release.
* Support in QMCPACK for CUDA_ARCH flag.
* No need to have explicit CUDA variant anymore.
* Internal QMCPACK CMake assumes a minimum GPU architecture if none is provided.
* cp2k: archive the Makefile after a successful installation
* cp2k: all checksums are now sha256
* libint: all checksums are now sha256 + added versions 2.4.X
* libxc: all checksums are now sha256 + added version 4.3.2
* cp2k: os.path.join instead of join_path + simplified openmp flags
* cp2k: turned into a MakefilePackage
* cp2k: refactored edit method so that Makefile writing happens last
* icu4c: Add cxxstd variant
For versions supported in Spack, ICU4C defaults to the C++11.
Provide a variant to default to this, plus options for C++14
and 17 if dependees require for ABI compatibility.
* icu4c: cxxstd variant cannot be multi
* Updated Geant4 and dependencies clhep and vecgeom to use cxxstd= variant so that it is applied consistently.
* Make standalone geant4 data packages that are used when data is not installed with geant4. This allows installing the data files are externals that can be common to many compiler version.
* move geant4 data package dependencies to umbrella package geant4-data
Fixes#7855Closes#8070Closes#2645
When searching for library directories (e.g. to add "-L" arguments to
the compiler wrapper) Spack was only trying the "lib/" and "lib64/"
directories for each dependency install prefix; this missed cases
where packages would install libraries to subdirectories and also was
not customizable. This PR makes use of the ".headers" and ".libs"
properties for more-advanced location of header/library directories.
Since packages can override the default behavior of ".headers" and
".libs", it also allows package writers to customize.
The following environment variables which used to be set by Spack
for a package build have been removed:
* Remove SPACK_PREFIX and SPACK_DEPENDENCIES environment variables as
they are no-longer used
* Remove SPACK_INSTALL environment variable: it was not used before
this PR
* Added a package for the MDAnalysis toolkit.
* Updated LBANN, Hydrogen, and Aluminum to not require CUDA-aware MPI
even when using CUDA. Fixed small bugs within both LBANN and Hydrogen
packages. Added requirements for breathe and cereal to LBANN.
* Update use case for doc dependencies.
* Cleaning up some of the LBANN software stack dependencies.
Add variant to support compiling against main C++ standards if needed
for ABI compatibility. Use 'default' value as Xerces-C autoconf system
does not enforce a minimum, or set a default, C++ standard.
* Extend current recipe for root package
* Add removed old version
* Add dependency type for Python and R packages
* Add compiler variants
* Adding new root version: 6.14.00
* Add back the minimum cmake version required
* LZ4 and xxhash support for old (using builtin options) and new versions (external packages)
* Set PYTHONPATH in setup_environment
* Address typos and issues pointed by HadrienG2
* Add newer ROOT versions
* Solve support for asimage
* Define incompatible variants
* Organize old dependencies
* Add support for minuit
* Add support for pythia6
* Remove unneeded list_url
* Update license header
* Remove block of commented old dependencies
* Contrain Qt version
* Comment pythia8 variant/dependency, not supported by spack
* Force not to build pythia8
* Adding a package for cardioid.
* Changing package to pass flake8
* Removing template leftovers per @ax3l 's advice
* Adding a homepage so tests pass.
* Removing whitespace for flake8
* Changing the name of master branch to match spack standards.
Add patch to fix Fortran mangling in CMake test
This is a fix for builds with GCC 6/7/8 and CMake 2/3. It includes
a link to the issue where this is reported. For now, the Spack
package applies the patch to all releases >= 2.0.2
This package depends on both python 3.5+ and node-js which depends on
python 2.7/2.8 to build. Currently it can only be installed if the
node-js package's python dependency is manually removed, so node-js
will build with python found on the system rather than provided by
spack. Upcoming commits may allow spack to reconcile this
automatically.
* xsdk@develop: switch trilinos from @master to @develop
* xsdk@develop: dtk - fix trilinos dependency on dtk.
- dkt-3.0 should be used with trilinos-12.4*
- dtk/master should be used with trilinos@develop
A version >= 0.9.4 required for py-black. Added latest, which is
0.10.0. Manually verified that the .tar.gz for v0.9.3 used to generate
the sha256 matched the previous md5.
Add tribool.patch to add explicit casts from tribool to bool in two
places. Boost, starting with version 1.69, turned on explicit
conversions for tribool, which breaks the build for dyninst.
This is merged into the current dyninst develop and is expected to be
part of the next release, so the version range uses the current
release as an upper bound.
Closes#10168
* Add versions 4.1.0.0 and 4.0.12.0
* Replace md5 checksums with sha256
* Logic to generate a helper script for versions earlier than 4 was
not running. This corrects the branch which controls whether this
script is generated.
* Constrain Java dependency to version 8 (GATK does not work with
Java 11)
* Avoid adding scripts that have dependencies not handled by Spack
such as gcloud and google-chrome. These scripts are good candidates
for later extensions.
Closes#2622
This retrieves and installs the binary of Oracle's OpenJDK (an
open-source JDK implementation). The logic is largely based on the
Spack JDK package (Oracle's closed-source JDK implementation).
For now this is only supports Linux. If the download could be
customized based on OS (for the same version), binaries are also
available for MacOS and Windows.
Build system was changed to use a Makefile. Therefore older versions
(which don't support this) are removed. The new build system also
supports testing by default.
Fixes#7372
Added patch method which renames config.h in the fftw subdir of the
source tree. fftw 2.1.5 appears to ship with a copy of this file
with all defines commented out. This gets read by the #include
directives instead of the version in the build directory with the
correct defines. As a result, many C preprocessor macros left
undefined, including F77_FUNC_ which causes the bulk of fttwf77.c
to be skipped due to an #ifdef, so fftw_reverse_int_array et al
not included in library. Fixes#7372
Also fixed some inconsistencies with the handling of quad and
long_double in specs between the configure method and the build,
check, and install methods.
The Mercury package previously depended on libfabric@develop on
Cray platforms in order to pick up a fix for the GNI provider that
was only available in git. This is no longer needed now that the
libfabric package is at 1.7.0.
Add new versions for py-keras. Versions of py-keras at or after
2.2.0 require keras-processing and keras-applications packages.
Add these packages to Spack and add dependencies to the py-keras
package.
* Add version 11.2.68
* Add variant to disable AVX2 for older hardware
* Change the makefile so libraries and includes are not placed
under $PREFIX/usr
* Updated URL and homepage
Added versions 1.0.0-rc1, 0.6.1, 0.6.0, 0.5.1
hwloc dependency was removed after 0.5.1, so the related configure
option is not specified after 0.5.1
Require py-matplotlib dependency version 2.2.3 (version was not
specified before)
Fixes#8343#4154#7370Closes#4155
All but one of the backports packages were using "pkgutil-style"
namespacing, but configparser was using "pkg_resource-style".
A namespace needs to be one style or another. This adds a new
configparser version which switches to using the pkgutil-style
namespace approach.
With this update, one can now install flake8 with Spack and use
it by loading modules.
The PREFIX variable in the makefiles is directly used to construct the
install name on the library metadata on darwin. If not passed, the
default /usr/local is used and the resulting librhash.dylib contains
usage informaiton of /usr/local/lib/librhash.0.dylib. This adds the
PREFIX= variable directly to the make command so the resulting usage
metadata contains the correct valid library path.
* flux-core: add v0.11.0 and updated dependencies
libuuid hasn't been a direct dependency of flux-core since 2015 (well
before any of the versions listed in the package).
The yaml-cpp dependency moved to flux-sched when we moved the jobpsec
library from core to sched.
Some python3 incompatibilities were found in 0.11.0, so bump the python3
support back a version.
* flux-sched: add v0.7.0 and make boost dependency more precise
* llvm: Bump version to 7.0.1
* llvm: Added perl-data-dumper build dependency for openmp
* llvm: Enable exception handling and RTTI
Useful to have turned on in general with RTTI but also necessary
to workaround some lldb stability issues with some versions of
libstdc++.
* Update the PMIx package
- Add latest releases to the list.
- Add dependency on hwloc for versions >= 3.0
- Flag preferred versions for libevent and hwloc
- Improve the description
- Point the project URL to the correct site
Signed-off-by: Ralph Castain <rhc@pmix.org>
* Only install the hwloc dependency for versions >= 3.0.0
Thanks to @ax3l for the suggestion
Signed-off-by: Ralph Castain <rhc@pmix.org>
* Add myself as a listed maintainer
Signed-off-by: Ralph Castain <rhc@pmix.org>
* Add warnings for existing conflicts. New versions of QMCPACK require a compiler with C++14 support.
* QMCPACK now requires a newer release of CMake.
* Switch QMCPACK to using FFTW-api provider.
* Relax dependencies on QMCPACK +da variant.
* Add QMCPACK 3.6.0 release.
* QMCPACK compiler-CUDA conflicts.
* QMCPACK fix typo in expressing conflict.
* Conditional needed since these variables are only used when FFTW is a dependency to QMCPACK.
* QMCPACK QE variant dependency was underspecified. Must include MPI as a hard dependency on QE.
* Update QMCPACK dependencies for HDF5, CMake and Boost.
* QMCPACK clean-up, more consistent use of spec vs. self.spec.
* Add support for collective I/O variant of QMCPACK.
* Update QMCPACK conflicts for QE and PHDF5 variants.
* Use built-in install method for QMCPACK starting with 3.6.0
* QMCPACK compiler C++14 conflicts were off by one version.
* QMCPACK package needs to setup_environment method.
* In support of PR#10252, get rid of slashes in string.
* Migrate these to the CUDA package and make a seperate PR.
* In support of PR#10252, get rid of join_path for nexus.
* In support of PR#10252, work around concretizer limitation.
* In support of PR#10252, convert to conditionals to if-else clauses for compactness.
* In support of PR#10252, get rid of extra space and new line in warning messages.
