Commit graph

7523 commits

Author SHA1 Message Date
Denis Davydov
2851b3f57c dealii: fix default of cuda_arch (#10690) 2019-02-24 08:53:13 +01:00
Adam J. Stewart
b43e8fcaa7
Python: optional dependencies and post-installation tests (#10335)
* Add post-installation tests to Python package

* libbsd does not build on macOS

* Make Python dependencies optional

* Add readline dep, remove ncurses patch, fix autoreconf
2019-02-23 12:36:26 -06:00
Justin Stanley
68af6148d1 beast-tracer: new package at 1.7.1 (#10652) 2019-02-22 19:22:30 -06:00
Levi Baber
0e7b19adf4 stacks package: add version 2.3b (#10653) 2019-02-22 19:16:44 -06:00
Brian Spilner
ba70d6e706 cdo package: add version 1.9.6 (#10654) 2019-02-22 18:38:35 -06:00
Geoffrey Oxberry
219c17a340 automake package: add version 1.13.4 (#10662)
Also replace MD5 hashes with SHA256 hashes for older versions
2019-02-22 18:38:00 -06:00
Eric Martin
49f56cb49c gmap-gsnap package: Add version 2019-02-15 (#10677) 2019-02-22 18:36:40 -06:00
Axel Huebl
7bd960ba86 ADIOS package: add version 2.3.1 (#10666)
Update older md5 checksums to sha256. Require CMake >= 3.6.0 (updated
from 3.5.0). Remove some third-party depends_on statements (which
were commented out before).
2019-02-22 18:36:04 -06:00
Hadrien G
510a28d156 Gaudi package: new version + xenv bugfix (#10668)
Extract implicit xenv dependency into a new package and add it as an
explicit dependency. Update Gaudi to explicitly depend on older
versions of xenv rather than the latest develop because that
conflicts with Spack's compiler wrappers.
2019-02-21 19:04:03 -06:00
cedricchevalier19
3b10e450d2 mono package: add new versions (#10670) 2019-02-21 18:52:30 -06:00
Daniel Topa
e230b0a00f UCX package: add version 1.5.0 (#10678) 2019-02-21 18:22:32 -06:00
Daryl W. Grunau
4f5be841d4 gcc package: skip nvptx_install for gcc~nvptx (#10672)
The nvptx installation support phase (added in 040b658) was always
running for gcc regardless of whether +nvptx was enabled. This
removes the "@when" syntax (which apparently is not working) and
adds a check inside of the "nvptx_install" function to bail out if
+nvptx is not enabled.
2019-02-21 15:43:29 -06:00
Jordan Ogas
ad8036e5a2 add charliecloud 0.9.7 (#10661) 2019-02-21 09:58:37 +01:00
Levi Baber
040b65876b gcc: add nvptx offload capability (#9406)
Add optional support for Nvidia PTX
2019-02-20 20:52:15 -06:00
Adam J. Stewart
af8d84197d
Download GNU packages from mirrors (Part 2) (#10555) 2019-02-20 09:08:42 -06:00
Massimiliano Culpo
0a252eccc4
uvw: new package (#10645) 2019-02-20 13:53:07 +01:00
Ben Morgan
fb6a2b5cab xxhash: edit prefix in Makefile for macOS (#10606)
On macOS, the build of libxxhash is performed by a bare `make`
launched by `MakePackage`s default `build` phase. As `prefix`
is not set at this point, the library gets compiled with a hard-coded
install name of `/usr/local/libxxhash.dylib`. Downstream clients,
in the tested case Root, will then fail to build as the install name
is incorrect.

Move setting of `prefix` from `install` to `edit` so that it
propagates to subsequent `build` and `install` phases.
2019-02-20 10:55:09 +01:00
Isaac Whitfield
286da7f47b new package: libyaml (#10634) 2019-02-19 12:45:31 -06:00
Nichols A. Romero
7dd5bdcfa4 Quantum ESPRESSO: HDF5 update (#10607)
* QE hdf5 is now a multi-valued variant. Update conflicts accordingly.

* Update dependencies for hdf5 multi-valued variant. Bug fix:  high-level hdf5 library needs to be a hard dependecy.

* Support for HDF5 serial interface. Note that this is not supported in QE autoconf, but will be fixed in the next official release.
2019-02-19 17:07:27 +01:00
Tristan Carel
efc3406900 nix: new package added (#9171) 2019-02-19 15:27:39 +01:00
Rob Latham
2242b9f338 update IOR package (#10595)
- new GitHub home
- new 3.2 release
2019-02-19 12:10:17 +01:00
Andreas Baumbach
66bfad8d44 cquery: new package (#10636) 2019-02-19 11:30:41 +01:00
Andreas Baumbach
9e3d92692d connect-proxy: new package (#10635) 2019-02-19 11:30:09 +01:00
Michael Kuhn
bcee3efecd mvapich2: Improve package (#10642)
- Add support for nemesis:ofi netmod
- Add missing pkg-config and libxml2 dependencies
2019-02-19 11:02:02 +01:00
Elizabeth Fischer
ec4da14e2c Add comments and version (#10592) 2019-02-18 21:48:01 -06:00
Matthias Diener
aabd2be31a git-lfs: add version 2.7.0 (#10631) 2019-02-18 08:59:11 +01:00
Axel Huebl
899c83c215 openPMD-api: mpi4py support (#10616)
Refactor dependencies, increase new min versions, add
mpi4py variant.
2019-02-18 08:54:27 +01:00
Axel Huebl
e5dc5c173e NLohmann-JSON: v3.5.0 (#10615)
Add the latest bugfix release.
2019-02-18 08:53:50 +01:00
Axel Huebl
a4f9501a56 Catch2: v2.6.1 (#10613)
add the lastest bugfix release of Catch2
2019-02-18 08:53:33 +01:00
Nichols A. Romero
05269ad392 Update CUDA support in QMCPACK (#10587)
* Support in QMCPACK for CUDA_ARCH flag.

* No need to have explicit CUDA variant anymore.

* Internal QMCPACK CMake assumes a minimum GPU architecture if none is provided.
2019-02-17 08:17:58 -05:00
Hadrien G
a93581e8de Fix plural typo in ROOT package (#10614) 2019-02-16 21:22:23 +01:00
Cameron Smith
a06bf21610 new variant: simmodsuite for pumi (#8775) 2019-02-14 21:36:56 +01:00
Massimiliano Culpo
b3dd95bd62
cp2k is now a MakefilePackage (#10570)
* cp2k: archive the Makefile after a successful installation

* cp2k: all checksums are now sha256

* libint: all checksums are now sha256 + added versions 2.4.X

* libxc: all checksums are now sha256 + added version 4.3.2

* cp2k: os.path.join instead of join_path + simplified openmp flags

* cp2k: turned into a MakefilePackage

* cp2k: refactored edit method so that Makefile writing happens last
2019-02-14 07:11:20 +01:00
Chris Green
051c66335f pythia6: fix input verification issue and example data checksum. (#10563)
* pythia6: fix issue validating integer input.

* pythia6: account for apparent update of example data file.
2019-02-13 23:17:46 -06:00
Chris Green
24d7f0f0af xrootd: allow specification of C++ standard. (#10577)
* xrootd: add cxxstd variant.

* xrootd: support for recent and upcoming versions.
2019-02-13 23:17:10 -06:00
Ben Morgan
7e8b8d61a1 icu4c: Add cxxstd variant (#10552)
* icu4c: Add cxxstd variant

For versions supported in Spack, ICU4C defaults to the C++11.
Provide a variant to default to this, plus options for C++14
and 17 if dependees require for ABI compatibility.

* icu4c: cxxstd variant cannot be multi
2019-02-13 23:05:39 -06:00
Hadrien G
6e95e06bda Add Gaudi and RELAX packages (#9194)
* Add a RELAX package

* Add a Gaudi package
2019-02-13 23:04:38 -06:00
Hadrien G
54f94e5828 Add a DD4hep package (#9208) 2019-02-13 22:58:27 -06:00
Hadrien G
0e0e7d4137 Add new ROOT release, move to SHA-256 checksums (#10583) 2019-02-13 22:54:45 -06:00
Patrick Gartung
0748a32b2d
Updated Geant4 and dependencies clhep and vecgeom to use cxxstd= variant (#10518)
* Updated Geant4 and dependencies clhep and vecgeom to use cxxstd= variant so that it is applied consistently.

* Make standalone geant4 data packages that are used when data is not installed with geant4. This allows installing the data files are externals that can be common to many compiler version.

* move geant4 data package dependencies to umbrella package geant4-data
2019-02-13 22:51:26 -06:00
Peter Scheibel
8ca384875e
Dynamic library/include paths (#8136)
Fixes #7855
Closes #8070
Closes #2645

When searching for library directories (e.g. to add "-L" arguments to
the compiler wrapper) Spack was only trying the "lib/" and "lib64/"
directories for each dependency install prefix; this missed cases
where packages would install libraries to subdirectories and also was
not customizable. This PR makes use of the ".headers" and ".libs"
properties for more-advanced location of header/library directories.
Since packages can override the default behavior of ".headers" and
".libs", it also allows package writers to customize.

The following environment variables which used to be set by Spack
for a package build have been removed:

* Remove SPACK_PREFIX and SPACK_DEPENDENCIES environment variables as
  they are no-longer used
* Remove SPACK_INSTALL environment variable: it was not used before
  this PR
2019-02-13 17:38:14 -06:00
Peter Doak
1bf86292e1 add latest version of pixman (#10580) 2019-02-13 21:26:51 +01:00
Hadrien G
9374adb455 Eigen package: deactivate some dependencies (#10572)
Set defaults in eigen package to omit typically-unused dependencies
2019-02-13 13:33:01 -06:00
Brian Van Essen
406a242847 Update lbann sw stack dependencies (#10579)
* Added a package for the MDAnalysis toolkit.

* Updated LBANN, Hydrogen, and Aluminum to not require CUDA-aware MPI
even when using CUDA.  Fixed small bugs within both LBANN and Hydrogen
packages.  Added requirements for breathe and cereal to LBANN.

* Update use case for doc dependencies.

* Cleaning up some of the LBANN software stack dependencies.
2019-02-13 11:19:15 -08:00
健美猞猁
2202579685 Cnvnator: a new package. (#8959) 2019-02-13 11:15:00 +01:00
健美猞猁
f9c27f52bd casacore: new package (#7471) 2019-02-12 17:22:48 +01:00
Ben Morgan
8fd4e9a9fa xerces-c: Add cxxstd variant (#10561)
Add variant to support compiling against main C++ standards if needed
for ABI compatibility. Use 'default' value as Xerces-C autoconf system
does not enforce a minimum, or set a default, C++ standard.
2019-02-12 09:40:59 +01:00
Brian Van Essen
dc12ca5c76 lbann: updated versions (#10568) 2019-02-12 09:05:32 +01:00
Matthias Diener
068eefb4f5 remove remaining lzma dependencies (#10553) 2019-02-12 09:03:50 +01:00
Matthias Diener
6e38423d1c openssl: add version 1.1.1a (#10562) 2019-02-12 08:58:50 +01:00