bernhardkaindl
1b95c97bb3
ccfits: add v2.6 ( #26089 )
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ccfits@2.5 doesn't compile on Ubuntu 18.04: Update to version 2.6.
2021-09-21 04:43:48 -06:00
bernhardkaindl
c6a33c28de
Fix deps of diffmark,faiss,fgsl,fipcheck,nbdkit,ncbi-magicblast,xcb-util-cursor ( #26091 )
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Fix missing type='build' deps for cpio, m4, pkg-config and python in
diffmark, faiss, fgsl, fipcheck, nbdkit, ncbi-magicblast and xcb-util-cursor
2021-09-21 04:16:43 -06:00
Harmen Stoppels
58663692a4
Rename 'variant_name' to 'variant' and document it in autotools build system ( #26064 )
2021-09-21 11:27:41 +02:00
Christoph Junghans
45ba4d94bd
votca-* packages: add version 2021.2 ( #26058 )
2021-09-20 16:14:19 -07:00
Adam J. Stewart
3e3b7b1394
New package: py-torchgeo ( #26059 )
2021-09-20 16:12:55 -07:00
Jordan Ogas
d0fd9e6d5f
charliecloud package: add version 0.25 ( #26073 )
2021-09-20 16:08:41 -07:00
adityakavalur
88880c5369
Include newer versions of UCX ( #26072 )
2021-09-20 23:41:26 +02:00
Danny McClanahan
aa7e354a3a
patch serf and scons to use #!/usr/bin/env python3 ( #26062 )
2021-09-20 22:12:30 +02:00
iarspider
f3d2f62468
Add variants to FORM recipe ( #25963 )
2021-09-20 13:53:54 -06:00
Edward Hartnett
65f285831e
added NOAA maintainers to ip package ( #26055 )
2021-09-20 11:36:03 -06:00
Olivier Cessenat
0197b364a2
mfem and petsc: alter hypre dependencies ( #25902 )
...
Hypre latest version 2.22.1 breaks MFEM and PETSc.
2021-09-20 09:51:29 -07:00
Edward Hartnett
96eefea9a3
added NOAA software team to maintainers list ( #26056 )
2021-09-20 09:01:53 -06:00
Olivier Cessenat
1ea58e0cb9
p7zip: resolve gcc 10 conflict ( #25676 )
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Fix credit: Eric Brugger
2021-09-20 07:43:07 -04:00
Tamara Dahlgren
c6f9e9baf6
strumpack: Update stand-alone test to use stage directory ( #25751 )
2021-09-20 07:36:58 -04:00
kjrstory
430caaf5f6
paraview: patch for version 5.9.1 with gcc 11.1.0 ( #25887 )
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* paraview: patch for version 5.9.1 with gcc 11.1.0
* Fix : blank line contains whitespace
2021-09-20 07:31:54 -04:00
Robert Underwood
6476e0cf02
gdb: new version v11.1 ( #25920 )
2021-09-20 07:30:37 -04:00
Jen Herting
acd4186a88
New packages: py-imgaug ( #25894 )
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* updates from sid
* [py-imgaug] url -> pypi
* [py-imgaug] added version 0.4.0 and fixed up dependencies
* [py-imgaug] updated copyright
Co-authored-by: Andrew Elble <aweits@rit.edu>
2021-09-20 07:29:43 -04:00
iarspider
ca8d16c9d1
Allow setting variant name in AutotoolsPackage._activate_or_not ( #26054 )
2021-09-20 10:54:24 +02:00
jacorvar
d20fa421ca
Fix R version ( #26061 )
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R version should be `3.0.0` instead of `3.00`.
2021-09-20 10:47:40 +02:00
Edward Hartnett
8fceaf4a33
added NOAA software team to maintainers list ( #26057 )
2021-09-19 19:02:02 -06:00
Vanessasaurus
534bad0ff7
updating OmegaH to 9.34.1 ( #26015 )
2021-09-19 08:55:54 -06:00
Todd Gamblin
4f8b643404
Create SECURITY.md
2021-09-19 06:43:14 -07:00
Vanessasaurus
c2f42a6f09
updating kokkos to 3.4.01 ( #26013 )
2021-09-19 06:10:55 -06:00
Vanessasaurus
148c7aeb06
updating singularity to 3.8.3 ( #26020 )
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Signed-off-by: vsoch <vsoch@users.noreply.github.com>
Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2021-09-19 04:20:15 -06:00
jacorvar
4f79a83dd1
Fix R version ( #26047 )
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R version should be `3.0.0`, in contrast to `3.00`.
2021-09-19 12:14:14 +02:00
Alec Scott
2d4d51eb5e
Add v1.6.0 to Benchmark ( #25996 )
2021-09-18 20:59:02 -06:00
Cameron Smith
b14d6d217e
omegah: add version 9.34.1 ( #25828 )
2021-09-18 19:58:44 -06:00
Alec Scott
5b400a69b7
Add v0.935 to Angsd ( #25995 )
2021-09-18 18:46:55 -06:00
Adam J. Stewart
c0839b14d5
Python: use platform-specific site packages dir ( #25998 )
2021-09-19 00:37:50 +00:00
Seth R. Johnson
6ff5795342
cmake: allow gcc on macOS for newer versions ( #25994 )
2021-09-18 17:34:43 -06:00
Michele Martone
60f0d0ac20
librsb: add v1.2.0.10 ( #26044 )
2021-09-18 17:43:41 -04:00
Axel Huebl
8f3482b2ce
FFTW: Fix OpenMP Build on macOS ( #26039 )
2021-09-18 15:13:47 -06:00
Vanessasaurus
fc79a5da17
updating siesta to 4.0.2 ( #26021 )
2021-09-18 08:05:02 -06:00
Vanessasaurus
1880db8457
updating universal ctags to 5.2.0.xxxx ( #26024 )
2021-09-18 07:13:55 -06:00
Vanessasaurus
6538727fb3
updating sparsehash to 2.0.4 ( #26023 )
2021-09-18 06:52:59 -06:00
Vanessasaurus
f5275fecc5
updating htslib to 1.13 ( #26012 )
2021-09-18 06:26:00 -06:00
Vanessasaurus
d499309433
updating nco to 5.0.1 ( #26014 )
2021-09-18 06:23:05 -06:00
Vanessasaurus
c5e2662dea
updating graphviz to 2.49.0 ( #26011 )
2021-09-18 06:19:56 -06:00
Vanessasaurus
7b0a505795
updating veloc to 1.5 and cleaning up spacing ( #26025 )
2021-09-18 06:10:56 -06:00
Vanessasaurus
e8b86b7ec6
updating cloc to 1.9.0 ( #26009 )
2021-09-18 05:44:04 -06:00
Vanessasaurus
608a0b1f8f
updating poppler ( #26016 )
2021-09-18 05:10:56 -06:00
Vanessasaurus
abd11cf042
updating raxml to 8.2.12 ( #26018 )
2021-09-18 04:58:50 -06:00
Vanessasaurus
8ad910d8f1
updating protobuf (Gooooogle!) to 3.18.0 ( #26017 )
2021-09-18 04:40:49 -06:00
Vanessasaurus
d5c985b888
updating samtools to 1.13 ( #26019 )
2021-09-18 04:16:51 -06:00
Vanessasaurus
f0443d0327
updating spades to 3.15.3 ( #26022 )
2021-09-18 03:46:50 -06:00
Vanessasaurus
9af1858bff
updating gatk to 4.2.2.0 ( #26010 )
2021-09-18 10:07:28 +02:00
David Beckingsale
fa3265ea51
Convert RAJA, CHAI and Umpire to CachedCMakePackages ( #25788 )
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* Switch Umpire to CMakeCachedPackage
* Fix missing import
* Correct tests option in Umpire
* Switch RAJA to CachedCMakePackage
* Convert CHAI to CachedCMakePackage
* Corrections in RAJA
* Patches in Umpire & RAJA for BLT target export
* Fixup style
* Fixup incorrect use of cmake_cache_string
2021-09-17 21:29:41 -07:00
Chris White
79ac572f21
update tutorial version of hdf5 ( #25368 )
2021-09-17 17:34:56 -07:00
Massimiliano Culpo
b847bb72f0
Bootstrap should search for compilers after switching config scopes ( #26029 )
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fixes #25992
Currently the bootstrapping process may need a compiler.
When bootstrapping from sources the need is obvious, while
when bootstrapping from binaries it's currently needed in
case patchelf is not on the system (since it will be then
bootstrapped from sources).
Before this PR we were searching for compilers as the
first operation, in case they were not declared in
the configuration. This fails in case we start
bootstrapping from within an environment.
The fix is to defer the search until we have swapped
configuration.
2021-09-17 18:28:48 -06:00
Harmen Stoppels
4d36c40cfb
Bump reframe ( #25970 )
2021-09-17 14:23:05 -06:00
