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Author SHA1 Message Date
AMD Toolchain Support
f754ed9788
Additional flags for ROMS (#27951) 
Co-authored-by: mohan babu <mohbabul@amd.com>
 2021-12-16 19:47:20 -08:00
iarspider
6443086222
CMake: fix rhash detection (#27944) 
* RHash: update version; create symlink librash.so

* Install headers

* Flake-8

* Update package.py

* Update package.py

* Update package.py (#19)

* Update package.py

* Update package.py

* Update var/spack/repos/builtin/packages/rhash/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Fix installation on macOS

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-12-16 18:02:26 -07:00
Larry Knox
556565ca0d
hdf5: add version 1.10.8 (#27613) 
* Update hdf5/package.py to add HDF5 1.10.8 release and move
  preferred version from 1.10.7 to 1.10.8.
* silo: versions before 4.11 conflict with hdf5 >= 1.10.8.
* Add patch file for silo@4.11 with hdf5 1.10 >=1.10.8 and
  hdf5 1.12 >= 1.12.1.
 2021-12-16 16:51:02 -08:00
Satish Balay
40886599ce
petsc: enable +rocm+kokkos (#27779) 
Also fix kokkos-kernels when kokkos is built with +rocm
 2021-12-16 14:47:31 -08:00
eugeneswalker
2310da0070
rocprofiler-dev package: needs numactl as link dep for tests (#27839) 2021-12-16 14:17:05 -08:00
Jen Herting
e76de4138e
New package: py-pynisher (#28052) 
* [py-pynisher] created template

* [py-pynisher]

- Added homepage
- Added description
- Removed fixmes
- added dependencies
 2021-12-16 14:21:45 -06:00
Howard Pritchard
43aeb4e48e
OpenMPI Package: add variant for romio (#27897) 
Add option to disable the internal romio build.
 2021-12-16 10:49:28 -08:00
iarspider
305f1d68d6
New package: py-scinum (#28041) 
* New package: py-scinum

* Update var/spack/repos/builtin/packages/py-scinum/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-12-16 11:29:14 -07:00
Tracy-Pantleo
1b273ed5c9
wonton package: fix reference error (#27963) 2021-12-16 09:55:37 -08:00
iarspider
bb1d0d1900
New package: py-schema (#28039) 2021-12-16 11:54:59 -06:00
iarspider
f262693983
New package: py-shellingham (#28043) 2021-12-16 11:43:52 -06:00
iarspider
8c81469f94
New version: py-correctionlib 2.1.0 (#28051) 2021-12-16 10:36:57 -07:00
vijay kallesh
6c250640c4
aocc: add v3.2.0 (#27946) 
Co-authored-by: amd-toolchain-support <toolchainsupport@amd.com>
 2021-12-16 14:37:59 +01:00
Harmen Stoppels
fb93979b94
Set backup=False by default in filter_file (#28036) 2021-12-16 13:50:20 +01:00
Harmen Stoppels
6357de4e61
Fix table formatting (#28037) 2021-12-16 12:13:12 +00:00
Andrew W Elble
96535cc4f9
MANPATH needs a trailing ':' to utilize system defaults (#21682) 
otherwise spack breaks using system man pages by default.

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2021-12-16 10:54:35 +00:00
Christian Goll
bd0ffa8a3c
Added opensuse/leap:15 to spack containerize (#27837) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2021-12-16 09:47:15 +00:00
Tamara Dahlgren
ac49ce8b3b
Provide meaningful message for empty environment installs (#28031) 
* Provide a meaningful failure message for installation of an empty environment

* Allow regenerating view per offline discussion
 2021-12-15 22:56:54 -08:00
Tamara Dahlgren
9240614928
Bugfix: Simplify preferred-test versions; set checksum defaults (#28026) 
* Simplify preferred-test versions; set checksum defaults

* Fix test_preferred failure
 2021-12-16 06:55:28 +01:00
snehring
89044ff5d5
delly2: updating to v0.9.1 (#28000) 2021-12-16 06:47:11 +01:00
Thomas Green
315f01fc96
meep: fixed dependencies (#27574) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2021-12-16 06:44:26 +01:00
snehring
e99aff93e1
samtools: fixing build issue due to change in 1.14 (#28024) 2021-12-16 06:34:22 +01:00
AMD Toolchain Support
42677ded8e
Fix for OpenFOAM pthread issue for AOCC 3.2 (#27949) 
* Fix for OpenFOAM pthread issue for AOCC 3.2

* addressing the review comments

* updating when command for aocc v3.2.0 and above

Co-authored-by: mohan babu <mohbabul@amd.com>
 2021-12-15 21:45:17 -06:00
Dennis R Kennetz
d375a7ea0a
pcre package: update download URL (#27867) 
* ftp url is dead as stated in the home page. The sha256 is the same in the sourceforge dl.
* added myself as a maintainer per spackbot's rec
 2021-12-15 18:58:13 -08:00
Jen Herting
3b4c622661
New package: py-copulas (#27920) 
Co-authored-by: Sid Pendelberry <sid@rit.edu>
 2021-12-15 18:56:13 -08:00
Erik Schnetter
ba87593afd
mpitrampoline package: add versions up to 2.8.0 (#27928) 2021-12-15 18:53:03 -08:00
Adam J. Stewart
af1ec6275d
py-matplotlib: add v3.5.1 (#27929) 2021-12-15 18:52:21 -08:00
Adam J. Stewart
3ff2fb43cf
py-pandas: add v1.3.5 (#27930) 2021-12-15 18:52:02 -08:00
Wouter Deconinck
a148e37c4c
assimp package: add version 5.1.3 (#27934) 2021-12-15 18:51:01 -08:00
Thomas Gruber
4d876bac0c
likwid package: add version 5.2.1 (#27935) 2021-12-15 18:49:19 -08:00
Asher Mancinelli
114b35144e
ExaGO package: add version 1.2.0; update dependency constraints (#27961) 
* PETSc is a core dependency, yet we left a variant for PETSc.
  This was removed, and ExaGO always depends on PETSc. The CMake
  arguments were updated accordingly.
* camp+cuda is only a dependency when we build with RAJA and CUDA.
 2021-12-15 18:23:36 -08:00
snehring
69184dc390
opa-psm2 package: add version 11.2.206 (#27968) 2021-12-15 18:13:22 -08:00
Mikhail Titov
70aea4cd82
RADICAL-Cybertools packages: add versions (#28002) 
* py-radical-entk: add version 1.9.0
* py-radical-pilot: add version 1.10.1
* py-radical-utils: add version 1.9.1
* py-radical-utils: requires py-pymongo less than version 4
 2021-12-15 17:53:05 -08:00
Adam J. Stewart
e091eacde0
New package: py-trojanzoo-sphinx-theme (#27972) 2021-12-15 17:48:43 -08:00
Adam J. Stewart
9447ec9600
py-sphinx package: add version 4.3.1 (#27933) 2021-12-15 16:22:22 -08:00
iarspider
351a1d8d37
New package: py-pysqlite3 (#28020) 
* New package: py-pysqlite3

* Apply suggestions from code review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-12-15 14:35:07 -07:00
iarspider
b0f996c8ef
New package: py-prwlock (#28017) 2021-12-15 12:00:28 -06:00
iarspider
4de197f778
New package: py-pybrain (#28019) 2021-12-15 11:59:04 -06:00
iarspider
bd7d3faa10
New package: py-parsimonious (#28015) 2021-12-15 11:29:36 -06:00
iarspider
bc152da68b
New version: py-prompt-toolkit 3.0.24 (#28016) 2021-12-15 11:17:25 -06:00
Harmen Stoppels
72ca7d6ee5
Revert "patches: make re-applied patches idempotent (#26784)" (#27625) 
This reverts commit c5ca0db27f.
 2021-12-15 08:56:03 -08:00
Harmen Stoppels
acc688b5e1
libtree: add v3.0.0 (#28011) 2021-12-15 17:38:10 +01:00
Adam J. Stewart
0cf3176462
open3d: add new package (#27577) 2021-12-15 17:34:22 +01:00
kwryankrattiger
116e1bb6cb
mesa: check correct LLVM variant for dylib (#27862) 2021-12-15 16:37:35 +01:00
Wouter Deconinck
9c1be2a510
mesa: add v21.2.6, v21.3.1 (#27796) 2021-12-15 14:13:52 +01:00
Greg Becker
5319b6e3b1
Add option to minimize full debug cores. include warning message about performance (#27970) 
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2021-12-15 08:52:53 +01:00
iarspider
ce94a786ae
New package: py-neurolab (#27996) 
* New package: py-neurolab

* Update package.py

* Update package.py
 2021-12-14 15:23:06 -07:00
iarspider
25c29d277f
New package: py-lizard (#27994) 
* New package: py-lizard

* Update package.py
 2021-12-14 14:44:19 -07:00
iarspider
e51337fcd9
New package: py-nbdime (#27995) 2021-12-14 15:22:24 -06:00
Zack Galbreath
3139894794
ci: Catch Exceptions when attempting to register a CDash build (#27883) 
This PR also slightly changes the behavior in ci_rebuild().
We now still attempt to submit `spack install` results to CDash
even if the initial registration failed due to connection issues.

This commit follows in the spirit of #24299. We do not want `spack install`
to exit with a non-zero status when something goes wrong while attempting to
report results to CDash.
 2021-12-14 14:18:08 -07:00