* Update py-bx-python package
- add update to py-bx-python
- switch to pypi downloads
- set dependencies
* Update var/spack/repos/builtin/packages/py-bx-python/package.py
I had initially pulled version 0.8.6 and then updated that to 0.8.8 but missed the change in the python specs between those two versions.
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* Fix version 0.7.4
- set dependency on python2
- add dependency on py-python-lzo
- add py-python-lzo package
- set py-numpy dependency to correspond to latest version that works
with python2
* Add constraint for py-six dependency
* Update var/spack/repos/builtin/packages/py-bx-python/package.py
Ah, I had that `when` clause in and then took it out as it did not seem to be needed. I guess it is always better to be more explicit.
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* Remove py-numpy constraint
Let the concretizer catch the conflict with python2 and py-numpy
versions.
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Fixes & additional variant(s) for HepMC3
* Syntax
* Restore recipe for HepMC2
* Remove FIXME
* Update package.py
* Apply suggestions from code review
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add extra version of py-jsonschema
* Update dependencies
* Update dependencies + flake8
* Add py-pyrsistent package
* Update package.py
* Update var/spack/repos/builtin/packages/py-jsonschema/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* Update package.py
* Update package.py
* Apply suggestions from code review
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* Apply suggestions from code review
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add a variant to QE that suppresses upstream patching. Need in order to do ddependency patching.
* QE variant fails to build often. Set default variant to False as a user friendly change.
* QMCPACK converter patch collides with internal QE patches. Deactivate internal patches when performing dependency patching.
* Clearer description of QE patch variant that is also flake8 compliant.
* Add extra version of py-sqlalchemy
* Update package.py
* Update package.py
* Update package.py
* Update package.py
* Update package.py
* Apply suggestions from code review
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* Update package.py
* Update package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
The hashing logic looks for function calls that are Spack directives.
It expects that when a Spack directive is used that it is referenced
directly by name, and that the directive function is not itself
retrieved by calling another function. When the hashing logic
encountered a function call where the function was determined
dynamically, it would fail (attempting to access a name attribute
that does not happen to exist in this case).
This updates the hashing logic to filter out function calls where the
function is determined dynamically when looking for uses of Spack
directives.
* Add extra version of py-terminado
* Update package.py
* Update var/spack/repos/builtin/packages/py-terminado/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add extra version of py-widgetsnbextension
* Update dependency version
* Update package.py
* Update package.py
* Update var/spack/repos/builtin/packages/py-widgetsnbextension/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add extra version of py-urllib3
* Update package.py
* Update package.py
* Update package.py
* Update var/spack/repos/builtin/packages/py-urllib3/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add extra version of vc
* Update package.py
* Update package.py
* Update var/spack/repos/builtin/packages/vc/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* Update package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Mark conflicts with binutils on darwin
* Explicitly require binutils bootstrapping and mark conflict with nvptx
* Disable gold variant by default on darwin
* igv: adding package igv
* removing some remaining initial boilerplate
* changing path construction to be more correct
* adding in type for java dep, also forgot about prefix.bin etc
