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Author SHA1 Message Date
Peter Scheibel
b9bf0b942c Use spec.traverse vs. recursive function. 
Also even though I calculated which installs are new (e.g. vs. packages that
have already been installed by a previous command) I forgot to make use of that
in create_test_output (so I was always generating test output even if a package
had been installed before running the test-install command).

Note to avoid confusion: the 'handled' variable (removed in this commit) did not
serve the same purpose as 'newInstalls': it was originally required because the
recursive approach would visit the same dependency twice if more than one
package depended on it.
 2015-10-15 11:52:08 -07:00
Peter Scheibel
f2b4341ad6 Always run with verbose output (so eliminate it as an option). Also remove other 
commented options.
 2015-10-15 10:45:03 -07:00
Peter Scheibel
11861fb8d7 Changing name of file requires changing function name to be invoked as a command 2015-10-15 10:35:42 -07:00
Peter Scheibel
e3d703b80f Change name of file to conform to conventions. 2015-10-15 10:33:39 -07:00
Peter Scheibel
2ae7839b66 Edit function names to conform to naming conventions. 2015-10-15 10:26:13 -07:00
Peter Scheibel
0d66362cee Only install 1 top-level package with testinstall. Otherwise if multiple 
packages are specified and a prior one fails, it will prevent any of the others
from succeeding (and generating test output) even if they don't share
dependencies.
 2015-10-15 10:17:08 -07:00
Ben Boeckel
3ce85b2270 spack: split spack_root from prefix 
A foundation for allowing runtime configuring of the prefix.
 2015-10-15 09:27:05 -04:00
Ben Boeckel
9ec4ae83af netcdf: link to MPI 
Newer GNU linker refuses to use transitive linking; if netcdf calls
MPI_Allreduce, it must link the providing library directly.

Also switched to CMake because I don't know autoconf well enough to know
how to put MPI stuff into it.
 2015-10-15 09:20:16 -04:00
Peter Scheibel
71dcf8833c Make sure to generate output for dependencies as if they were separate tests: 
the original intent was to generate output as if each package was a unit test,
but I noticed that I was only generating test output for top-level packages.
 2015-10-13 19:02:41 -07:00
Peter Scheibel
1ce6d8b627 Add spec YAML format to test output. 2015-10-13 10:41:47 -07:00
Todd Gamblin
d16095c856 Add forgotten file from previous commit. 2015-10-13 10:35:19 -07:00
Peter Scheibel
9f56d9c807 Don't create test output for any package that was already installed. 2015-10-12 20:56:03 -07:00
Peter Scheibel
6cd22e5786 1. Added Junit XML format 
2. Specify output to a file vs. a directory
3. Use [1] and [2] to write an XML file tracking success of package installs in
Junit XML format
 2015-10-12 20:49:23 -07:00
Peter Scheibel
b7249d66b3 Adding command testinstall. See "spack testinstall -h" for documentation. 
Still need to add output formatting (in a commonly parse-able format like Junit
or TAP). May want to adjust how the build log is accessed in case of a build
failure.
 2015-10-12 19:18:31 -07:00
Todd Gamblin
2c81875019 Fix bug in colify color handling. 2015-10-12 14:44:41 -07:00
Gregory L. Lee
5dd39bfca5 bug fix for github issue 122 2015-10-08 08:12:30 -07:00
Todd Gamblin
58c5373890 update warning message for spack -k. 
- warning said it didn't do checksums; really does.
 2015-10-08 00:14:44 -07:00
Todd Gamblin
5d64012868 Merge branch 'features/libxcb-1.11.1' into develop 2015-10-08 00:13:47 -07:00
Massimiliano Culpo
17de9a37f1 gcc : fixed spec file 2015-10-06 18:49:18 +02:00
Massimiliano Culpo
d44571257a spec file : everything is dumped, only link rule is modified 2015-10-06 18:49:04 +02:00
Massimiliano Culpo
f068d1ba57 GCC : added variants for libelf, binutils, isl. gcc@5.0: still has issues 2015-10-06 18:48:47 +02:00
Matthew LeGendre
fac4428766 Documentation for external packages. 2015-10-05 14:04:33 -07:00
Gregory L. Lee
6fcf16b710 added libxcb version 1.11.1 2015-10-05 12:59:26 -07:00
Matthew LeGendre
18f0b24a7f Add tests for spack external dependencies, plus fixes for issues found by those tests. 2015-10-05 11:37:36 -07:00
Matthew LeGendre
e4d2ba30b5 Fix failure in spack.test.config.ConfigTest from incorrect compiler config merging 2015-10-05 11:37:36 -07:00
Matthew LeGendre
650c9d4e36 Allow spack to build against external non-spack-installed packages. 2015-10-05 11:37:36 -07:00
Matthew LeGendre
53d70fff01 Fix type error with YAML config when merging lists from different configs. 2015-10-05 11:36:06 -07:00
Matthew LeGendre
53cde110b1 Update Spack mirror command to match docs 2015-10-05 11:36:06 -07:00
Matthew LeGendre
987cd9e78f Update docs for YAML configuration files and preferred concretization 2015-10-05 11:36:06 -07:00
Matthew LeGendre
ee68a76a19 Bug fixes from testing spack preferred packages 2015-10-05 11:36:06 -07:00
Matthew LeGendre
8d7b7e5d5d Use preferred package rules when concretize'ing specs 2015-10-05 11:36:06 -07:00
Matthew LeGendre
b5c597b318 Allow specs to be sorted based on preferred packages, versions, compilers, variants and dependencies. 2015-10-05 11:36:05 -07:00
Matthew LeGendre
59f89dd3be Allow long names in format string variables 2015-10-05 11:36:05 -07:00
Mario Melara
75d30b08fb Added current version 3.2 of libffi version 3.1 has a bug that interferes with glib 2015-10-01 21:51:55 -07:00
Todd Gamblin
cc6252cdfa Merge pull request #118 from scalability-llnl/features/scr 
update scr to 1.1.8
 2015-09-29 18:21:37 -07:00
Adam Moody
5563c66675 update scr to 1.1.8 2015-09-29 18:18:34 -07:00
Gregory Becker
5fda7daf57 an ordered database test 2015-09-27 17:54:24 -07:00
Todd Gamblin
dd21a01dc4 Merge pull request #116 from mamelara/develop 
Added samtools bioinformatics software
 2015-09-27 17:29:50 -07:00
Todd Gamblin
8818f4ac5e Remove enabled variants from install prefix. 
- these make the prefix too long in many cases.
- users can figure out which install is which by querying.
 2015-09-27 17:01:35 -07:00
Todd Gamblin
adbd393c39 Remove special characters (@, %, +, ~, etc) from stage name 2015-09-27 17:01:35 -07:00
Mario Melara
13eb461ec3 Adding bowtie2 package along with patch 2015-09-24 11:21:54 -07:00
Mario Melara
521632b3dc Added samtools bioinformatics software 2015-09-23 16:30:44 -07:00
Todd Gamblin
6d4eed3845 Merge pull request #102 from RasmusWL/features/fish 
Add fish (shell) package
 2015-09-23 01:37:59 -07:00
Todd Gamblin
82ea7aec51 Merge pull request #106 from justintoo/add-package-doxygen 
(Package) Add Doxygen (v1.8.10)
 2015-09-23 01:37:31 -07:00
Todd Gamblin
d474eeb424 Merge pull request #110 from scalability-llnl/features/boostupdate 
update boost package for new releases
 2015-09-23 00:32:22 -07:00
Todd Gamblin
5d6baacc56 Merge pull request #111 from scalability-llnl/features/protobuf 
add protobuf package
 2015-09-23 00:31:26 -07:00
Todd Gamblin
46cf0a23d9 Merge pull request #112 from scalability-llnl/features/glog 
add glog package
 2015-09-23 00:30:37 -07:00
Todd Gamblin
f02af701e5 Merge pull request #113 from scalability-llnl/features/gflags 
add gflags package
 2015-09-23 00:29:50 -07:00
Todd Gamblin
5f826a0ab7 Merge pull request #114 from scalability-llnl/features/snappy 
Features/snappy
 2015-09-23 00:27:27 -07:00
Todd Gamblin
ba83dd56a1 Merge pull request #115 from scalability-llnl/features/lmdb 
add lmdb package
 2015-09-23 00:21:22 -07:00