This commit introduces the command
spack module tcl setdefault <package>
similar to the one already available for lmod
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
This PR also slightly changes the behavior in ci_rebuild().
We now still attempt to submit `spack install` results to CDash
even if the initial registration failed due to connection issues.
This commit follows in the spirit of #24299. We do not want `spack install`
to exit with a non-zero status when something goes wrong while attempting to
report results to CDash.
This PR is meant to move code with "business logic" from `spack.cmd.buildcache` to appropriate core modules[^1].
Modifications:
- [x] Add `spack.binary_distribution.push` to create a binary package from a spec and push it to a mirror
- [x] Add `spack.binary_distribution.install_root_node` to install only the root node of a concrete spec from a buildcache (may check the sha256 sum if it is passed in as input)
- [x] Add `spack.binary_distribution.install_single_spec` to install a single concrete spec from a buildcache
- [x] Add `spack.binary_distribution.download_single_spec` to download a single concrete spec from a buildcache to a local destination
- [x] Add `Spec.from_specfile` that construct a spec given the path of a JSON or YAML spec file
- [x] Removed logic from `spack.cmd.buildcache`
- [x] Removed calls to `spack.cmd.buildcache` in `spack.bootstrap`
- [x] Deprecate `spack buildcache copy` with a message that says it will be removed in v0.19.0
[^1]: The rationale is that commands should be lightweight wrappers of the core API, since that helps with both testing and scripting (easier mocking and no need to invoke `SpackCommand`s in a script).
After this PR an error in a single package while detecting
external software won't abort the entire procedure.
The error is reported to screen as a warning.
Remove a try/catch for an error with no handling. If the affected
code doesn't execute successfully, then the associated variable
is undefined and another (more-obscure) error occurs shortly after.
Remove a custom bootstrapping procedure to
use spack.bootstrap instead
Modifications:
* Reference count the bootstrap context manager
* Avoid SpackCommand to make the bootstrapping
procedure more transparent
* Put back requirement on patchelf being in PATH for unit tests
* Add an e2e test to check bootstrapping patchelf
I think this test should be removed, but when it stays, it should at
least follow the symlink, cause it fails for me if I let spack build
patchelf and have a symlink in a view.
Modifications:
- [x] Removed `centos:6` unit test, adjusted vermin checks
- [x] Removed backport of `collections.OrderedDict`
- [x] Removed backport of `functools.total_ordering`
- [x] Removed Python 2.6 specific skip markers in unit tests
- [x] Fixed a few minor Python 2.6 related TODOs in code
Updating the vendored dependencies will be done in separate PRs
* Make CUDA and ROCm architecture conditional
fixes#14337
The variant to specify which architecture to use
for CUDA and ROCm are now conditional on +cuda and
+rocm respectively.
* cp2k: make all CUDA related variants conditional on +cuda
* Add connection specification to mirror creation
This allows each mirror to contain information about the credentials
used to access it.
Update command and tests based on comments
Switch to only "long form" flags for the s3 connection information.
Use the "any" function instead of checking for an empty list when looking
for s3 connection information.
Split test to use the access token separately from the access id and key.
Use long flag form in test.
Add endpoint_url to available S3 options.
Extend the special parameters for an S3 mirror to accept the
endpoint_url parameter.
Add a test.
* Add connection information per URL not per mirror
Expand the mirror-based connection information to be per-URL.
This will allow a user to specify different S3 connection information
for both the fetch and the push URLs.
Add a parameter for "profile", another way of storing the id/secret pair.
* Switch from "access_profile" to "profile"
Remove the "get_executable" function from the
spack.bootstrap module. Now "flake8", "isort",
"mypy" and "black" will use the same
bootstrapping method as GnuPG.
Currently Spack vendors `pytest` at a version which is three major
versions behind the latest (3.2.5 vs. 6.2.4). We do that since v3.2.5
is the latest version supporting Python 2.6. Remaining so much
behind the currently supported versions though might introduce
some incompatibilities and is surely a technical debt.
This PR modifies Spack to:
- Use the vendored `pytest@3.2.5` only as a fallback solution,
if the Python interpreter used for Spack doesn't provide a newer one
- Be able to parse `pytest --collect-only` in all the different output
formats from v3.2.5 to v6.2.4 and use it consistently for `spack unit-test --list-*`
- Updating the unit tests in Github Actions to use a more recent `pytest` version
This type of error is skipped:
make[1]: *** [Makefile:222: /tmp/user/spack-stage/.../spack-src/usr/lib/julia/libopenblas64_.so.so] Error 1
but it's useful to have it, especially when a package sets a variable
incorrectly in makefiles
Intel mpi comes with an installation of libfabric (which it needs as a
dependency). It can use other implementations of libfabric at runtime
though, so if you install a package that depends on `mpi` and
`libfabric`, you can specify `intel-mpi+external-libfabric` and ensure
that the Spack-built instance is used (both by `intel-mpi` and the
root).
Apply analogous change to intel-oneapi-mpi.
