Commit graph

13047 commits

Author SHA1 Message Date
QuellynSnead
977117b502
Paraview 5.6.2's version of VTK (8.2.0) is incompatible with Python 3.8 (#18881)
* Paraview 5.6.2's version of VTK (8.2.0) is incompatible with Python 3.8.
(see https://gitlab.kitware.com/vtk/vtk/-/issues/17670)

* Trailing whitespace
2020-09-28 19:30:18 -05:00
Sreenivasa Murthy Kolam
60644f889e
rocfft ,rocrand changes for rocm-3.8.0 (#18879)
* rocfft changes for rocm-3.8.0

* changes to the version

* rocrand recipe changes for rocm-3.8.0
2020-09-28 17:08:29 -05:00
Massimiliano Culpo
971e0049b1
EnTT: added new package at v3.5.2 (#19021) 2020-09-28 12:07:28 -05:00
Harmen Stoppels
496d83a26a
Kokkos nvcc wrapper 3.2.00 (#19023)
* Add more updates for kokkos 3.2 release, particularly nvcc-wrapper

* Use an ordinary Package

Co-authored-by: Jeremiah J Wilke <jjwilke@kokkos-dev-2.sandia.gov>
2020-09-28 10:24:18 -06:00
Adam J. Stewart
c62c94d521
APR: fix build with Apple Clang 12 (#19016) 2020-09-28 12:22:31 -04:00
Ganesh Kumar
7d965f7bb1
ROCm3.8 hipcub, hipsparse, rocprim, rocsparse & rocthrust (#18936)
* ROCm3.8 atmi, hipify-clang, rocm-clang-ocl, rocm-dbgapi, rocprofiler

* ROCm3.8 hipcub, hipsparse, rocprim, rocsparse & rocthrust

* review comments

* Review comments

Co-authored-by: root <root@mlseqa-hyd-virt-srv-07.amd.com>
2020-09-28 11:10:34 -05:00
Ganesh Kumar
a3d290a248
ROCm3.8 hipfort recipe (#19024)
* ROCm3.8 hipfort recipe

* review comments
2020-09-28 10:26:20 -05:00
Pariksheet Nanda
a50b3323a9
librsvg: added v2.50.0 (#18865) (#18869) 2020-09-28 13:29:48 +02:00
Massimiliano Culpo
ac7c69e62e
libuv: added v1.40.0 and v1.39.0 (#18974) 2020-09-25 16:52:29 -05:00
darmac
421f4e12a7
Add new package: 3proxy (#18831) 2020-09-25 11:33:51 -05:00
eugeneswalker
7bf0ebc5eb
veloc: add v1.4, unconstrain dependency on boost (#18938)
* veloc: add v1.4

* veloc: unconstrain boost dependency
2020-09-25 11:24:56 -05:00
t-nojiri
51b90edd78
sgpp: allow building on aarch64 (#18968) 2020-09-25 17:20:35 +02:00
Matthias Diener
9c5a47183e
pyopencl: add new package (#18899)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-25 10:19:56 +02:00
Sergey Kosukhin
54517e571a
eccodes: update and a add new version (#18864) 2020-09-25 09:44:37 +02:00
t-nojiri
9cc0bc9ca3
steps:allow building on aarch64 (#18966) 2020-09-25 09:33:03 +02:00
Kelly (KT) Thompson
a7cbd6074e
lcov: added v1.15 (#18959) 2020-09-25 09:28:01 +02:00
Matthias Diener
8ac1d62159
oclgrind: added new package at v19.10 (#18943) 2020-09-25 09:07:07 +02:00
egreen77
c9c2bac373
umap: added v2.1.0 (#18946) 2020-09-25 08:57:47 +02:00
Cody Balos
aab8c45a34
sundials: added v5.4.0 (#18949) 2020-09-25 08:51:34 +02:00
t-nojiri
78b304c0c3
minimd: allow building on aarch64 (#18951) 2020-09-25 08:49:50 +02:00
Ganesh Kumar
a9c9501a47
ROCm3.8 atmi, hipify-clang, rocm-clang-ocl, rocm-dbgapi, rocprofiler (#18871)
Co-authored-by: root <root@mlseqa-hyd-virt-srv-07.amd.com>
2020-09-25 08:26:04 +02:00
Brian Van Essen
ce5d0cb951
Updated cuDNN to include hash codes for 8.0.3. (#18948) 2020-09-24 20:16:14 -05:00
Sinan
878f7cbf14
package py-psycopg2: add new version, specify python versions (#18877)
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2020-09-24 14:41:02 -05:00
darmac
906fa5f50d
Add new package: cachefilesd (#18907) 2020-09-24 11:53:51 -05:00
darmac
420bfa41a2
Add new package: dhtest (#18908) 2020-09-24 11:52:23 -05:00
darmac
c8989e2247
Add new package: cronie (#18909) 2020-09-24 11:51:58 -05:00
darmac
8aa06154dc
Add new package: dcap (#18910) 2020-09-24 11:51:29 -05:00
darmac
c5f5b7273d
Add new package: ctpl (#18911) 2020-09-24 11:51:05 -05:00
darmac
2a2d90f9cd
Add new package: chrony (#18912) 2020-09-24 11:50:36 -05:00
darmac
e4699cbc54
Add new package: duperemove (#18913) 2020-09-24 11:50:07 -05:00
darmac
9e06e56634
Add new package: dracut (#18914) 2020-09-24 11:49:43 -05:00
darmac
b9e7db3447
Add new package: distcc (#18915) 2020-09-24 11:49:20 -05:00
darmac
72203e529f
Add new package: libuser (#18916) 2020-09-24 11:48:50 -05:00
t-nojiri
93e989316e
lcals: Fix for aarch64 (#18918) 2020-09-24 11:47:21 -05:00
darmac
9288091963
Add new package: rrdtool (#18919) 2020-09-24 11:46:45 -05:00
darmac
928e46088c
Add new package: procps-ng (#18921) 2020-09-24 11:43:06 -05:00
darmac
c4d3b59166
Add new package: quota (#18922) 2020-09-24 11:42:42 -05:00
darmac
a0c32e6ed7
Add new package: slang (#18923) 2020-09-24 11:42:18 -05:00
darmac
e0dd5ce68a
Add new package: acct (#18924) 2020-09-24 11:41:53 -05:00
darmac
fb7f07b27c
Add new package: smartmontools (#18926) 2020-09-24 11:40:26 -05:00
darmac
af162498f0
Add new package: geoip (#18927) 2020-09-24 11:39:41 -05:00
darmac
b01aea2cec
Add new package: libtheora (#18928) 2020-09-24 11:38:42 -05:00
darmac
65ea663fd4
Add new package: setserial (#18929) 2020-09-24 11:38:05 -05:00
darmac
cf4e468ed2
Add new package: diffmark (#18930) 2020-09-24 11:37:38 -05:00
darmac
b04ee99315
Add new package: debbuild (#18931) 2020-09-24 11:37:01 -05:00
darmac
ae05e73bc8
Add new package: turnserver (#18932) 2020-09-24 11:36:33 -05:00
darmac
6b3116516e
Add new package: disktype (#18934) 2020-09-24 11:33:31 -05:00
darmac
a9a25acdb9
Add new package: dnstop (#18935) 2020-09-24 11:32:17 -05:00
Nichols A. Romero
89cca23840
Classic Flang Master Update (#18748)
* Flang master branch is now the preferred version.

* Flang master branch can now use LLVM 9

* Remove master as this was never used by Flang.

* Add LLVM-Flang release_90 and release_90.
2020-09-24 11:27:43 -05:00
Sreenivasa Murthy Kolam
6ec3c4d35e
renaming of Rocclr ,rocgdb to hip-rocclr and rocm-gdb ,fix build error for rocm-opencl (#18900)
* renaming of rocclr , rocgdb to hip-rocclr and rocm-gdb

* fix flake8 errors and fix build error for luma
2020-09-24 10:49:46 -05:00
Dr. Christian Tacke
69d618e90d
pythia8: Add version 8303, make default (#18874)
* Add version 8303
* Until now, the latest 82xx release was the `preferred` version.
  We agreed to let the latest version be the preferred one now.
2020-09-24 08:40:07 +02:00
Michael Kuhn
7810f73653
Fix pkgconfig dependency (#18750)
pkgconfig is the virtual dependency, pkg-config is one provider.
2020-09-23 21:29:47 -05:00
darmac
0fabbff03e
Add new package: usbutils (#18825) 2020-09-23 21:15:06 -05:00
darmac
3b76217e8a
Add new package: abduco (#18725) 2020-09-23 21:11:18 -05:00
darmac
aec8cf1602
Add new package: aeskeyfind (#18726) 2020-09-23 21:09:39 -05:00
darmac
3e61d3c536
Add new package: bannergrab (#18730)
* Add new package: bannergrab

* refine installation flow
2020-09-23 21:06:50 -05:00
darmac
ae6834311b
Add new package: beakerlib (#18734) 2020-09-23 21:05:45 -05:00
darmac
b9e79ee99d
Add new package: bitlbee (#18735) 2020-09-23 21:05:15 -05:00
darmac
7fcd32aa6c
Add new package: libcap-ng (#18752) 2020-09-23 21:02:22 -05:00
darmac
5e8ac6c261
Add new package: ck (#18753) 2020-09-23 21:01:52 -05:00
darmac
7c8cb01179
Add new package: cracklib (#18755) 2020-09-23 21:01:29 -05:00
darmac
0b8fb43e3e
Add new package: cunit (#18757) 2020-09-23 21:00:57 -05:00
darmac
ddf27b56ad
Add new package: ding-libs (#18758) 2020-09-23 21:00:19 -05:00
darmac
dec8da9257
Add new package: dmidecode (#18759) 2020-09-23 20:59:51 -05:00
darmac
3cdb79f569
Add new package: dnsmap (#18760) 2020-09-23 20:59:11 -05:00
darmac
84f111ff85
Add new package: dotconf (#18761) 2020-09-23 20:58:27 -05:00
darmac
74e4b41008
Add new package: dropwatch (#18762) 2020-09-23 20:58:06 -05:00
darmac
56270b229f
Add new package: audacity (#18764) 2020-09-23 20:56:50 -05:00
darmac
4664221576
Add new package: earlyoom (#18765) 2020-09-23 20:56:09 -05:00
darmac
1662251b77
Add new package: libuecc (#18766) 2020-09-23 20:55:40 -05:00
darmac
2bc6997418
Maven: add version 3.0.4 for some special package (#18767) 2020-09-23 20:55:15 -05:00
darmac
d4fe61f770
Add new package: gsettings-desktop-schemas (#18768) 2020-09-23 20:54:48 -05:00
darmac
3f892a7722
Add new package: libproxy (#18770) 2020-09-23 20:51:42 -05:00
darmac
dc0cff5eb2
Add new package: libatasmart (#18771) 2020-09-23 20:51:20 -05:00
darmac
c4f57890b5
Add new package: libbytesize (#18772)
* Add new package: libbytesize

* libbytesize: refine url
2020-09-23 20:50:55 -05:00
darmac
bbb3d94599
Add new package: libdaemon (#18773) 2020-09-23 20:50:13 -05:00
darmac
ce10e4ea03
Add new package: libnet (#18776) 2020-09-23 20:47:57 -05:00
darmac
6f48ac5eb6
Add new package: libkcapi (#18777) 2020-09-23 20:47:19 -05:00
darmac
92fe14cc47
Add new package: libp11 (#18778) 2020-09-23 20:46:57 -05:00
darmac
b69643de7f
Add new package: librelp (#18779) 2020-09-23 20:46:28 -05:00
darmac
527ea798c5
Add new package: librtlsdr (#18780) 2020-09-23 20:45:47 -05:00
darmac
f2093dc3c4
Add new package: libtar (#18781) 2020-09-23 20:45:22 -05:00
darmac
8ae3ccdea4
Add new package: libtommath (#18782) 2020-09-23 20:44:51 -05:00
darmac
63d45b975d
Add new package: libxcrypt (#18783) 2020-09-23 20:44:23 -05:00
darmac
e70c20f13f
Add new package: libverto (#18785) 2020-09-23 20:43:55 -05:00
darmac
28c6f1ddc2
Add new package: logrotate (#18786) 2020-09-23 20:43:29 -05:00
darmac
4a2b56122c
Add new package: mcpp (#18787) 2020-09-23 20:42:45 -05:00
darmac
17c55f3d91
Add new package: mlocate (#18788) 2020-09-23 20:42:21 -05:00
darmac
16c0375d70
Add new package: mokutil (#18789) 2020-09-23 20:41:12 -05:00
darmac
1b707988c5
Add new package: openslp (#18791) 2020-09-23 20:38:38 -05:00
darmac
f87d032228
Add new package: sblim-sfcc (#18792) 2020-09-23 20:38:02 -05:00
darmac
d1d5ee395d
Add new package: p11-kit (#18793) 2020-09-23 20:37:36 -05:00
darmac
6970e0da69
Add new package: patchutils (#18794)
* Add new package: patchutils

* patchutils: refine url
2020-09-23 20:37:06 -05:00
darmac
83c1f035a2
Add new package: pciutils (#18795) 2020-09-23 20:35:50 -05:00
darmac
9577ed71fe
Add new package: oci-systemd-hook (#18805) 2020-09-23 20:35:14 -05:00
darmac
8c3b081147
Add new package: py-asyncio (#18809) 2020-09-23 20:30:17 -05:00
darmac
9263f56b6d
Add new package: py-robotframework (#18814) 2020-09-23 20:19:36 -05:00
darmac
dd4f55cb46
Add new package: py-chronyk (#18815) 2020-09-23 20:17:11 -05:00
darmac
0dcfd8909a
Add new package: sysfsutils (#18819)
* Add new package: sysfsutils

* fix flake8 error
2020-09-23 20:12:52 -05:00
darmac
16d4bc59ba
Add new package: tcpdump (#18820) 2020-09-23 20:12:24 -05:00
darmac
0aafdcfadb
Add new package: tdengine (#18821) 2020-09-23 20:11:57 -05:00
darmac
15e75c03ff
Add new package: systemtap (#18822) 2020-09-23 20:11:21 -05:00
darmac
733a8ee77b
Add new package: timedatex (#18823)
* Add new package: timedatex

* timedatex: fix flake8 error
2020-09-23 20:10:54 -05:00
darmac
72e03161e4
Add new package: xmlrpc-c (#18828) 2020-09-23 20:06:23 -05:00
darmac
3b9ba5a9ab
Add new package: authselect (#18832) 2020-09-23 20:02:56 -05:00
darmac
d72c73cd60
Add new package: bird (#18833) 2020-09-23 20:02:15 -05:00
darmac
5cf8fd4cb3
Add new package: libmetalink (#18834) 2020-09-23 20:01:50 -05:00
darmac
d796566605
Add new package: libnfnetlink (#18835) 2020-09-23 20:01:22 -05:00
darmac
6539d45ad6
Add new package: mesa-demos (#18839) 2020-09-23 19:59:36 -05:00
darmac
a0228d6f94
Add new package: zabbix (#18840) 2020-09-23 19:59:05 -05:00
darmac
63340a1fac
Add new package: libevdev (#18886) 2020-09-23 19:56:23 -05:00
darmac
653344a9f1
Add new package: fakechroot (#18887) 2020-09-23 19:55:47 -05:00
darmac
3690a81aa4
Add new package: f2c (#18889) 2020-09-23 19:55:21 -05:00
darmac
e294a1e0a6
fasttext: new package at v0.9.2 (#18890) 2020-09-23 18:53:31 +02:00
vvolkl
394a23d392
py-uproot4: added new package at v0.0.27 (#18891) 2020-09-23 18:17:57 +02:00
vvolkl
3c418d9faa
py-awkward1: added new package at v0.3.1 (#18892) 2020-09-23 18:15:32 +02:00
Matthieu Dorier
4277bc6429
nlohmann-json-schema-validator: new package at v2.1.0 (#18837) 2020-09-23 17:28:33 +02:00
Howard Pritchard
aedc056f9a
trilinos: patch for cray cce fortran compiler (#18164)
two patchfiles needed since this file changed between 12.12.1 and 12.14.1

Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
2020-09-23 09:54:51 -05:00
darmac
562f504000
Add new package: addrwatch (#18728)
* Add new package: addrwatch

* addrwatch: refine url
2020-09-23 14:02:03 +02:00
Andre Sailer
8fac02e437
LCIO: added v2.15.[0123] (#18841) 2020-09-23 13:55:01 +02:00
Mathias Anselmann
b578d55d12
setting old GO default values for older trilinos versioins to (hopefully) not break the installation. Adjusting dealii package to just explicitly set GO if trilinos >= 12.18.1 is installed (#15439) 2020-09-22 18:52:05 -05:00
Jen Herting
bbb6b14540
treelite: new package at v0.93 (#18861) 2020-09-22 22:30:04 +02:00
Massimiliano Culpo
92b8177b77
gromacs: remove 'rdtscp' variant, deduce the flag from the target (#18868)
refers #18858
2020-09-22 13:11:35 -06:00
Miroslav Stoyanov
acf4dc2e12
Heffte: add magma variant (#18849) 2020-09-22 15:05:00 -04:00
Martin Pokorny
a23d67f7ea
casacore: added v3.3.0 (#18870) 2020-09-22 20:55:58 +02:00
Andrew Gaspar
0d0ba79bfb
Rust: added v1.46.0 (#18863) 2020-09-22 20:54:54 +02:00
Jordan Ogas
435c8862a6
charliecloud: added v0.19 (#18866) 2020-09-22 20:45:29 +02:00
Glenn Johnson
84dbf6948e
Set conflicts parameter for cuda-11 (#18847)
Magma is not currently compatible with CUDA-11. While this is reflected
in the package, it is done with a comment in a `depends_on` directive,
which has the effect of trying to install a version of CUDA that may be
different from the one in the current environment, without any message
to the end user. A `conflicts` is a better way to handle this.
2020-09-22 12:35:13 -04:00
Adam J. Stewart
9558377f0f
Bash: fix build with Xcode 12 (#18843) 2020-09-22 12:25:54 -04:00
Ganesh Kumar
9e906e2d47
ROCm 3.8 Stage1 Components (#18830)
* ROCm 3.8 Stage1 Components

* version review comments

* 3.5 dependency restrictions

Co-authored-by: root <root@mlseqa-hyd-virt-srv-07.amd.com>
2020-09-22 11:09:03 -05:00
Simon Pintarelli
7d0ae0f295
sirius: use -DCUDA_ARCH for develop, version >7.0.0 (#18852)
Also remove master branch
2020-09-22 17:35:11 +02:00
victorusu
a078e2ba13
ReFrame: added v3.1 (#18860) 2020-09-22 17:19:51 +02:00
Chris White
30d24db116
Added RAJA v0.12.1`and Umpire v4.0.1 (#18756)
Also renamed 'master' to 'main'
2020-09-22 15:40:16 +02:00
Hadrien G
a1e19de8e1
acts: added v1.0 (#18859) 2020-09-22 15:05:59 +02:00
Christoph Junghans
bdefac6964
miniqmc: fix install (#18857) 2020-09-21 18:15:27 -06:00
Robert Blake
b272e00d6a
util-linux: fix bash completion install errors. (#18696)
* Disable bash completion by default.

* flake8

* Adding explicit dependence on libuuid

* Adding explicit dependence on cryptsetup

This way we don't pick up host crypto packages by mistake.

* Fixing the completion directory.

* Update var/spack/repos/builtin/packages/util-linux/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* flake8

* Removing libuuid linkage according to @michaelkuhn on #18696

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-21 16:11:44 -05:00
Christoph Junghans
0dd7f140b0
nut: fix install (#18848)
* nut: fix install

* flake8
2020-09-21 16:09:53 -05:00
Christoph Junghans
165dbf719d
fix spack-build usages (#18846) 2020-09-21 12:19:06 -05:00
Joseph Wang
88187bc63c
add groff and ghostscript (#18803)
Without these packages, graphviz will set groff/ghostscript to false which will cause the build to fail.
2020-09-21 17:39:13 +02:00
Adam J. Stewart
678e9f5ad2
libksba: add new version (#18798) 2020-09-20 08:53:42 -04:00
Adam J. Stewart
7d5ddb1fc6
readline: simplify linking to ncurses (#18801) 2020-09-19 16:32:42 -05:00
Adam J. Stewart
489377d051
SciPy: add patch to fix XCode 12 build (#18800) 2020-09-19 16:32:26 -05:00
Adam J. Stewart
458dc81878
ncurses: fix libs method (#18799) 2020-09-19 16:32:05 -05:00
Adam J. Stewart
f570d7a45c
graphviz: fix build with Apple Clang 12.0.0 (#18797) 2020-09-19 16:29:42 -05:00
Adam J. Stewart
36e9c1eba3
fish: relax ncurses dependency constraints (#18796) 2020-09-19 16:29:27 -05:00
Massimiliano Culpo
fcb4dfc307
Ensure variant defaults are parsable from CLI. (#18661)
- Add a unit test to check if there are unparsable defaults
- Fix 'rust' and 'nsimd' variants
2020-09-19 07:54:26 +02:00
Larry Knox
fff2f34de8
Hdf5 1.10.7 (#18712)
* Update hdf5/package.py for HDF5 1.10.7 release and obsolete home url.
Add maintainer to hdf/package.py.

* remove stray space.

* Remove unnecessary /diplay/support from homepage urls.
2020-09-18 21:38:56 -05:00
Tom Payerle
e36498cb46
bedtools2: Add missing python build dependency (#18744) (#18746)
Makefile invokes python to build some scripts
See #18744
2020-09-18 21:38:21 -05:00
Michael Kuhn
6198963ede
popt: Add missing libiconv dependency (#18731)
Without this dependency, the build fails due to undefined references.
2020-09-18 18:00:00 -04:00
Adam J. Stewart
b44cf08cb2
py-notebook: add new version (#18638) 2020-09-18 14:46:12 -05:00
Glenn Johnson
6e82776773
Add mumax-3.10 release version (#18740)
This PR adds the current release version of mumax and tweaks the install
of the previous beta version.

- Set the url parameter to reflect the release version over the beta
  version. Hopefully, this will be consistent going forward.
- Set an explicit url for the previous beta version.
- Accept values for `cuda_arch`. The previous version had its own list
  but the release version does not.
- Replace the built in cuda compute capabilities list with the one
  provided by Spack for the 3.10beta version.
2020-09-18 13:36:00 -04:00
Seth R. Johnson
71c7e28ca7
swig: add version 4.0.2 and 4.0.2-fortran (#18741) 2020-09-18 13:35:33 -04:00
Jen Herting
44c7826892
[py-pyarrow] added variant cuda (#18716)
* [py-pyarrow] added variant cuda

* [py-pyarrow] simplifying variant dependencies
2020-09-18 10:28:28 -05:00
darmac
8cb1192050
util-linux: fix build error (#18647)
* util-linux: fix build error

* refine install stage
2020-09-18 10:04:28 -05:00
darmac
a4cdf664c6
Add new package: shiro (#18541)
* Add new package: shiro

* refine description and dependencies
2020-09-18 10:03:32 -05:00
ketsubouchi
403ea4384e
ocaml: support 4.11 (#18705) 2020-09-18 10:02:50 -05:00
Toyohisa Kameyama
7d0a46c051
iwyu: Require llvm+all_targets on non-x86_64 systems (#18710) 2020-09-18 10:31:03 -04:00
Axel Huebl
a8b6faf430
py-recommonmark: fix URL and docutils version (#18714) 2020-09-18 12:07:57 +02:00
Axel Huebl
275583c02f
py-breathe: added v4.21.0 (#18722) 2020-09-18 07:44:54 +02:00
Mark W. Krentel
80fe51046c
libpfm4: add version 4.11.0 (#18720)
Add version 4.11.0 for libpfm4.
Add myself as maintainer.
2020-09-17 15:58:23 -05:00
Jen Herting
e329e13f32
[arrow] added cuda variant (#18715) 2020-09-17 15:26:51 -05:00
Glenn Johnson
4b41d56bc3
Add bart-0.6.00 (#18717)
This PR adds version 0.6.00 of bart.
2020-09-17 15:25:08 -05:00
Adam J. Stewart
f9699fd3ff
py-nbconvert: add new version (#18636) 2020-09-17 15:23:59 -05:00
Adam J. Stewart
69d8417d8a
py-nbclient: add new package (#18628) 2020-09-17 12:54:03 -07:00
Adam J. Stewart
01df552149
py-matplotlib: add v3.2.2 (#18681) 2020-09-17 12:46:20 -07:00
t-nojiri
b66d756da6
bowtie : Fix for aarch64 (#18709) 2020-09-17 11:42:32 -05:00
Glenn Johnson
7c01c64d53
gpu-burn: allow to build with non-gcc compilers (#18707)
This PR modifies the patch to use $(CXX) rather than g++ to allow the
spack compiler to be used.
2020-09-17 17:24:22 +02:00
Glenn Johnson
2576d8d767
Update libbeagle (#18703)
This PR fixes a couple of things with the libbeagle package.

- libbeagle can only be built for one GPU type. Add a test for that.
- version 2 had the arch statement in
  libhmsbeagle/GPU/kernels/Makefile.am but version 3 has it in
  configure.ac. Put the variant specified value in configure.ac for
  consistency.
2020-09-17 10:04:21 -05:00
Ganesh Kumar
0f332c73a6
Rocm 3.7 miopen, miopengemm, rocalution and rocm-opencl (#18690)
* ROCm 3.5 miopen recipe

* fixing flake8 issues

* cmake variant fix

* min support fix

* variant possible values

* rocm3.7 change for miopen, rocalution and rocm-opencl

* review comments
2020-09-17 10:00:45 -05:00
Enrico Usai
91bd99b4b2
aws-parallelcluster: add 2.9.1 and 2.9.0 releases (#18676)
Checked all the third party dependencies for all the versions.
2020-09-17 09:59:11 -05:00
arjun-raj-kuppala
7fb83047fd
Hipify clang with AMD rocm 3.7.0 update (#18672)
* Hipify clang with rocm 3.7.0 update

* Update var/spack/repos/builtin/packages/hipify-clang/package.py

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2020-09-16 22:18:48 -05:00
Greg Sjaardema
9a5f043ce6
seacas: Force use of non-mpi-enabled hdf5 (#18702)
Due to recent changes in the `netcdf-c` package, it is now necessary to explicitly request a non-mpi-enabled hdf5 build if building a non-mpi-enabled seacas.
2020-09-16 16:37:13 -05:00
Robert Blake
f95d7959b2
lustre: Adding external support. Closing #18698 (#18700) 2020-09-16 16:29:59 -05:00
Simon Frasch
91649763ab
spla: Add version 1.1.1 and fix cmake flag when build with +cuda (#18699) 2020-09-16 16:27:00 -05:00
Sajid Ali
7c23498f1d
bump CGAL version (#18693)
* bump CGAL version

* Address reviewer comments

* flake8 fix

* Address reviewer comments

* Address reviewer comments
2020-09-16 16:22:40 -05:00
Andre Sailer
635b8243fe
[dd4hep]: add variant lcio (#18691) 2020-09-16 17:33:14 +01:00
Tiziano Müller
0d5c065678
libvdwxc: unbreak concretization, request fftw-api (#18688)
* libvdwxc: unbreak concretization, request fftw-api

mixing both fftw and fftw-api in a dependency tree can trigger the
following:

```
$ spack spec cp2k@master +sirius
==> [2020-09-16-12:36:06.552981] sirius applying constraint gsl
==> [2020-09-16-12:36:06.554270] sirius applying constraint openblas@0.3.10%gcc@7.5.0~consistent_fpcsr~ilp64+pic+shared threads=none arch=linux-opensuse_leap15-sandybridge
Traceback (most recent call last):
  File "./bin/spack", line 64, in <module>
    sys.exit(spack.main.main())
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/main.py", line 762, in main
    return _invoke_command(command, parser, args, unknown)
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/main.py", line 490, in _invoke_command
    return_val = command(parser, args)
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/cmd/spec.py", line 103, in spec
    spec.concretize()
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/spec.py", line 2228, in concretize
    user_spec_deps=user_spec_deps),
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/spec.py", line 2716, in normalize
    visited, all_spec_deps, provider_index, tests)
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/spec.py", line 2654, in _normalize_helper
    dep, visited, spec_deps, provider_index, tests)
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/spec.py", line 2613, in _merge_dependency
    visited, spec_deps, provider_index, tests)
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/spec.py", line 2654, in _normalize_helper
    dep, visited, spec_deps, provider_index, tests)
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/spec.py", line 2554, in _merge_dependency
    provider = self._find_provider(dep, provider_index)
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/spec.py", line 2489, in _find_provider
    providers = provider_index.providers_for(vdep)
  File "/data/tiziano/debug-spack/spack2/lib/spack/spack/provider_index.py", line 80, in providers_for
    return sorted(s.copy() for s in result)
  File "/data/tiziano/debug-spack/spack2/lib/spack/llnl/util/lang.py", line 249, in <lambda>
    lambda s, o: o is not None and s._cmp_key() < o._cmp_key())
TypeError: '<' not supported between instances of 'str' and 'NoneType'
```

while at the same point disallowing MKL as a fftw provider.
Solving both issues by depending on `fftw-api@3` instead and adding a
conflict on `^fftw~mpi` when using `+mpi` (thanks to alalazo).

* cp2k: use conflicts instead of runtime checks for fftw/openblas variants
2020-09-16 10:41:46 -05:00
t-nojiri
cb218058bc
fraggenescan: Modify build_targets for aarch64 (#18687) 2020-09-16 10:40:33 -05:00
Xavier Delaruelle
0b3e860608
environment-modules: add version 4.6.0 (#18686) 2020-09-16 10:39:55 -05:00
Robert Pavel
2f0565de64
Added spackage for cosmoflow-benchmark proxy app (#18685)
* Initial Draft of Cosmoflow Spackage

Need to add in logic to streamline cpu/gpu builds

* Added ~cuda logic to cosmoflow spackage

Added logic to support a ~cuda build for cosmoflow

* Requested Changes to Cosmoflow Spackage

Made requested changes to cosmoflow spackage
2020-09-16 10:18:01 -05:00
Severin Strobl
e41c3ad1fc
Likwid versions >= 5.0.0 depend on Lua 5.2. (#18675)
* Likwid versions >= 5.0.0 depend on Lua 5.2.

According to https://github.com/RRZE-HPC/likwid/issues/324 recent
versions of Likwid require Lua 5.2.

* Update var/spack/repos/builtin/packages/likwid/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-16 10:16:08 -05:00
Jason Lee
1a9f97fd0d
jemalloc: Use AutotoolsPackage and allow for arbitrary public API prefixes (#18680)
Removed je variant
2020-09-15 20:37:05 -05:00
Greg Sjaardema
6a3583f181
MatIO: Update repository and add new versions (#18683)
MatIO development has switched to github from sourceforge.  Updated the `git` and `url` variables and added the four new versions (1.5.14 -- 1.5.17) that have been released since the last update of this package.
2020-09-15 16:43:45 -05:00
arjun-raj-kuppala
bad9f2bc28
AMD ROCmValidationSuite recipe for 3.5.0 and 3.7.0 (#18678)
* AMD ROCmValidationSuite recipe for 3.5.0 and 3.7.0

* Updated the PR comments for rocmvalidationsuite recipe
2020-09-15 13:16:41 -05:00
Nikolay Simakov
1b1bfd883a
namd: Added optimization auto-selection for skylake-X+ CPU for 2.14 and 2.15a1 (AVX512 tile) (#18671) 2020-09-15 10:08:26 -05:00
Sergey Kosukhin
5cff304809
CLAW: update the package (#18673) 2020-09-15 10:04:59 -05:00
Tom Payerle
6752a1c377
Qbox minor issues 18664 (#18665)
* qbox: install to correct directory structure

* qbox: Have qb executable put in bin rather than src subdir

* qbox: Fix python script shebangs to use python from path

* qbox: Add dependencies on gnuplot, python2 for utilities

* qbox: fix flake8 issue

* qbox: Add $prefix/util to PATH
2020-09-15 09:54:26 -05:00
ketsubouchi
33e8dcad99
nseg: add return 0; to void functions (#18481) 2020-09-15 10:24:51 +02:00
Adam J. Stewart
5e6875008c
fish: add dependencies, patch MacOS (#18526) 2020-09-15 08:43:53 +02:00
Adam J. Stewart
5f0c3427ae
py-cmocean: added new package at v2.0 (#18614) 2020-09-15 08:36:26 +02:00
Adam J. Stewart
2af9e44340
Add setuptools run-time dependency to various Python packages (#18616) 2020-09-15 08:30:59 +02:00
Adam J. Stewart
b3ee04c6ef
py-jupyterlab-pygments: added new package at v0.1.1 (#18627) 2020-09-15 08:30:08 +02:00
Adam J. Stewart
f7030287d3
py-nest-asyncio: add new package at v1.4.0 (#18629) 2020-09-15 08:28:51 +02:00
Adam J. Stewart
445988011c
py-ipykernel: added v5.3.4, moved url to PyPI (#18630) 2020-09-15 08:28:17 +02:00
Adam J. Stewart
ef37852bb4
py-ipython: added v7.18.1 (#18631) 2020-09-15 08:26:27 +02:00
Adam J. Stewart
40a66317e8
py-jupyter-client: added v6.1.7, moved url to PyPI (#18632) 2020-09-15 08:25:39 +02:00
Adam J. Stewart
792c48a558
py-jupyter-core: updated the type of the setuptools dependency (#18633) 2020-09-15 07:42:28 +02:00
Adam J. Stewart
0448ade7b5
py-jupyterlab-server: added v1.2.0 (#18634) 2020-09-15 07:39:30 +02:00
Adam J. Stewart
defde398c4
py-argon2-cffi: added new package at v20.1.0 (#18626) 2020-09-15 07:38:16 +02:00
Adam J. Stewart
77d20906c0
py-jupyterlab: added v2.2.7 (#18635) 2020-09-15 07:20:15 +02:00
Adam J. Stewart
682223f1f4
py-nbformat: add v5.0.7, moved url to PyPI (#18637) 2020-09-15 07:18:12 +02:00
Adam J. Stewart
60a5a176fb
py-terminado: added v0.8.3 (#18639) 2020-09-15 07:15:38 +02:00
Adam J. Stewart
c59836222e
py-traitlets: added v5.0.4, moved url to PyPI (#18640) 2020-09-15 07:15:00 +02:00
Robert Pavel
4fc2370559
Added Missing Tag to Cradl Spackage (#18669)
Added missing proxy apps tag to cradl spackage
2020-09-14 18:55:53 -06:00
Robert Pavel
a2673aeddd
CRADL Machine Learning Proxy Spackage (#18668)
* Initial CRADL Spackage Work

Currently resolving ```--single-version-externally-managed``` error

* Fixed GPUtil Issues

Thanks to Vinay Ramakrishnaiah for overwriting install

* Finished CRADL Install Function

Finished CRADL install function which is basically copying the scripts
to the install directory. Also resolved flake8 issues for PR purposes
2020-09-14 14:25:49 -06:00
Simon Frasch
49512e21ab
SIRIUS: Update dependencies (#18622)
* sirius: Fixed dependency spfft when build with +rocm

* sirius: Added new dependency spla for develop build

* sirius: Added maintainer
2020-09-14 12:23:32 -05:00
darmac
5f47170492
Add new package: webbench (#18650)
* Add new package: webbench

* Update var/spack/repos/builtin/packages/webbench/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-14 09:57:40 -05:00
ketsubouchi
41b68741ec
cpio: add --rtlib=compiler-rt for %fj (#18619)
* cpio: add --rtlib=compiler-rt for %fj

* cpio: simplify if

* Update var/spack/repos/builtin/packages/cpio/package.py

This seems better.

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-14 09:55:47 -05:00
t-nojiri
a250006449
ngmlr: support for aarch64 (#18621)
* ngmlr: support for aarch64

* ngmlr: Fixed patch file
2020-09-13 23:14:59 -05:00
ketsubouchi
3cfce42563
nek5000: Support Fujitsu fortran (#18659) 2020-09-13 23:14:04 -05:00
Paul
c29b74e7ad
Updated FZF package for newer versions. (#18608)
* Support for external find.
* Added latest version (0.22.0) and conditions to package to continue
support for older versions.
2020-09-13 11:27:56 -05:00
Joseph Wang
58f101de88
use github for download (#18657) 2020-09-13 10:23:46 -05:00
Andrew W Elble
a734dabf2b
new package: py-reproject (#18641)
* new package: py-reproject
add setuptools build/run dep to py-astropy-healpix

* fixes

* fix
2020-09-12 15:37:34 -05:00
darmac
85f7a8bf71
Add new package: delta (#18648) 2020-09-12 15:37:14 -05:00
darmac
10dab474ce
cvs: add a patch for segv issue (#18649) 2020-09-12 09:47:39 -05:00
darmac
e355fc16ad
Add new package: dbxtool (#18651) 2020-09-12 09:45:05 -05:00
darmac
3211ac5136
Add new package: geoip-api-c (#18653) 2020-09-12 09:44:28 -05:00
darmac
cde4654525
Add new package: libspiro (#18654) 2020-09-12 09:44:02 -05:00
darmac
6d39e6ebea
Add new package: hping (#18311)
* Add new package: hping

* Update var/spack/repos/builtin/packages/hping/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/hping/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

Fix flake8 errors

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-12 09:36:30 -05:00
darmac
128731ec74
Add new package: jetty-project (#18555)
* Add new package: jetty-project

* refine dependency

* refine maven version
2020-09-12 09:35:38 -05:00
Robert Blake
afb0883762
ncurses: adding external support. (#18609)
* ncurses: adding external support.

* Update var/spack/repos/builtin/packages/ncurses/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/ncurses/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/ncurses/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Fixing includes.

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-11 16:00:11 -05:00
Adam J. Stewart
e7040467f2
NumPy: added v1.19.2 (#18615) 2020-09-11 15:38:24 +02:00
srekolam
1aceb38b89
Changes for hipsparse, rocthrust recipes for rocm_3.7.0 (#18497)
* changes for hipsparse,rocthrust recipes for rocm_3.7.0

* changes to rocrand for 3.7.0

* version changes
2020-09-10 17:33:21 -05:00
srekolam
4a474d9d67
recipes changes for hipblas, rocprim, rocfft, rocsolver for rocm3.7.0 (#18495)
* recipes changes for rocprim,rocfft,rocsolver for rocm3.7.0

* changes to hipcub recipe for rocm-3.7.0

* changes to address review comments
2020-09-10 17:32:41 -05:00
Robert Pavel
29645ceba5
Adding Missing Versions for Flux-Sched/Flux-Core and Compiler Flags (#18612)
* Checksummed New Flux Versions

Checksummed new flux versions to let spack detect them

* Added CXXFlags to build Flux-sched

Added missing cxxflags to build flux-sched
2020-09-10 16:53:28 -05:00
Robert Pavel
3fabdb6e9b
Adding Cuda Variant to SW4Lite (#18590)
* Adding Cuda Variant to SW4Lite

Added cuda variant of sw4lite  as per guidance in README

* Updated SW4Lite+cuda to Current Header Conventions

Updated sw4lite+cuda to use current conventions for spackage include
dirs

* Fixing FLake8 Issue with Sw4lite+cuda Fix

Fixed overly long line and further underlined sticky note reminding me
to run flake8 BEFORE pushing

* Switching to Spack Compiler Wrapper

Switching to spack compiler wrapper for consistency
2020-09-10 16:53:13 -05:00
Tim Haines
ff6ca57dda
Dyninst: add v10.2.1 (#18611) 2020-09-10 16:09:06 -05:00
Rémi Lacroix
114317464b
Orca: update the package. (#18593)
* Orca: Add new versions.

* Orca: Support OpenMPI without the legacy wrappers.

By default, Spack builds OpenMPI without the legacy wrappers when using the Slurm scheduler. This breaks Orca since its binaries are hardcoded to call "mpirun". To workaround this issue, add a "mpirun" wrapper which calls "srun" when required.
2020-09-10 11:55:13 -05:00
Tiziano Müller
2bc9821c43
update CP2K pkg for 8+ (#18607)
* cp2k: do not support ~openmp for v8+

* sirius: version bump

* cp2k: fix overlapping deps for elpa

fixes #18029

* cp2k: update SIRIUS dependency for v8+

* spfft: requires CMake 3.11+

* cp2k: fix build with +sirius
2020-09-10 10:00:31 -05:00
Toyohisa Kameyama
34f4049815
dpdk: Avoid option conflicts between spack wrappers and Makefiles on aarch64 gcc. (#18603) 2020-09-10 09:59:18 -05:00
t-nojiri
e13e2b0d54
prism: support for aarch64 (#18562)
* prism: support for aarch64

* prism: Change patch file.
2020-09-10 09:56:19 -05:00
Adam J. Stewart
25291cf01c
GDAL: fixed Java bindings, added v3.1.3 (#18494) 2020-09-10 15:08:24 +02:00
Tomoki, Karatsu
778e659a03
openfoam: Set 'FOAM_SIGFPE' when using Fujitsu compiler. (#18601) 2020-09-10 15:01:50 +02:00
Tomoki, Karatsu
d4535f3115
fj: fixed homepage URL. (#18602) 2020-09-10 14:55:52 +02:00
Fabian Brandt
fc919e490e
NetworKit: update to v7.1, including dependencies (#18604) 2020-09-10 14:53:16 +02:00
srekolam
651cffae0a
Rocprofiler changes for rocm-3.7.0 release (#18599)
* rocprofiler changes for rocm-3.7.0 release

* fix flake8 errors
2020-09-09 21:43:07 -05:00
Brian Van Essen
87dc324f36
Support older cuda arch capabilties. (#18597) 2020-09-09 21:42:34 -05:00
ketsubouchi
b014ffcd3d
darshan-util: remove return(-1) from void function (#18504)
* darshan-util: remove return(-1) from void function

* Update var/spack/repos/builtin/packages/darshan-util/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/darshan-util/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-09 21:03:59 -05:00
psakievich
7b2c59e6cf
Fix typo in nalu-wind package (#18596) 2020-09-09 19:12:14 -05:00
Paul
9eac1ed6a8
Support external find for gpgme. (#18594) 2020-09-09 17:39:33 -05:00
Christoph Junghans
691e46c4f5
Packages/gamess ri mp2 mini app (#18595)
* gamess-ri-mp2-miniapp: initial import

* flake8

* Update var/spack/repos/builtin/packages/gamess-ri-mp2-miniapp/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-09 16:10:59 -06:00
Glenn Johnson
f1652e89af
Add new versions of intel-mkl (#18592) 2020-09-09 15:27:36 -05:00
arjun-raj-kuppala
9c8cfcca0f
Adding hipify-clang and aomp recipe for rocm (#18333)
* Adding aomp recipe for rocm 3.5.0 release

* hipify-clang rocm recipe

* incorporated suggested changes on PR#18333 for rocm aomp recipe

* remove binutils dependency and update to devicelibs tar path
2020-09-09 13:47:51 -05:00
Jen Herting
857530c5ae
[parallel] added version 20200822 (#18591) 2020-09-09 10:58:07 -07:00
Robert Brunner
1ae50f8022
Added specific "@master" version specifier for component libraries when building (#18579)
the develop version of SCR
2020-09-09 12:52:36 -05:00
Jen Herting
f7d1f845f4
[py-thinc] fixed checksum (#18571) 2020-09-09 11:25:06 -05:00
Garth N. Wells
3dedd2e321
(py-)fenics-dolfinx: fix dependencies (#18586)
* Fix (py-)fenics-dolfinx dependencies

* flake8 updates
2020-09-09 10:55:06 -05:00
Ganesh Kumar
4c5151327f
Rocm 3.7 rccl (#18587)
* ROCm 3.5 miopen recipe

* fixing flake8 issues

* cmake variant fix

* min support fix

* variant possible values

* ROCm 3.7 RCCL changes
2020-09-09 10:49:40 -05:00
Ganesh Kumar
a18700a86a
Rocm 3.7 rocm smi (#18522)
* ROCm 3.5 miopen recipe

* fixing flake8 issues

* cmake variant fix

* min support fix

* variant possible values

* ROCm 3.7 support for rocm-smi

* review comments change

* miopen merge conflict resolve

* reverting back from copy_tree to install_tree
2020-09-09 08:22:40 -05:00
Simon Frasch
290b77fe43
spla: Add version 1.1.0 and ROCm support (#18561) 2020-09-09 07:22:53 -05:00
Toyohisa Kameyama
4472914847
audacious: added gettext and iconv dependency. (#18584) 2020-09-09 11:23:01 +02:00
Adam J. Stewart
8494d26c0a
nn-c: fix pic flags (#18478) 2020-09-09 10:25:57 +02:00
Adam J. Stewart
ba47a057f0
py-torchvision: add variant to set image backend (#18500) 2020-09-09 10:16:50 +02:00
Adam J. Stewart
96364235e3
readline: fix build with ncurses~termlib (#18524) 2020-09-09 10:12:46 +02:00
Adam J. Stewart
4307b73299
pcre2: fix libs property (#18525) 2020-09-09 10:11:29 +02:00
Hadrien G
d24532f574
acts: added v0.32 and adapt to latest master changes (#18563) 2020-09-09 09:44:44 +02:00
Adam J. Stewart
346d12dc6c
Pandas: added v1.1.2 (#18580) 2020-09-09 09:32:56 +02:00
t-nojiri
d11705f9d0
r-ff: support for aarch64 (#18585) 2020-09-09 09:01:51 +02:00
darmac
e3cd3fb9eb
Add new package: quartz (#18539) 2020-09-08 21:29:26 -05:00
Martin Aumüller
ab51edecb5
openscenegraph: remove dependency on Qt for newer versions (#18531)
Starting with OpenSceneGraph 3.5.5, support for windows managed by Qt
has been moved to the seperate project osgQt. Hence, a dependency on Qt
is not needed any longer for version 3.5.5 or newer.
In order to still satisfy the dependency on OpenGL, a depends_on('gl')
has been added.
2020-09-08 21:28:27 -05:00
darmac
b1cea5c23e
Add new package: kylin (#18537)
Co-authored-by: root <root@localhost.localdomain>
2020-09-08 21:27:01 -05:00
darmac
275ac86925
Add new package: sqlite-jdbc (#18540) 2020-09-08 21:26:11 -05:00
darmac
0f4f4a2e95
Add new package: orientdb (#18542) 2020-09-08 21:21:35 -05:00
darmac
97b7af01d9
Add new package: nacos (#18543) 2020-09-08 21:20:41 -05:00
darmac
0325cb564b
Add new package: fastjson (#18545) 2020-09-08 21:17:19 -05:00
darmac
a0ba89d84a
Add new package: guacamole-client (#18546) 2020-09-08 21:15:52 -05:00
darmac
a12ced781c
Add new package: jansi-native (#18547) 2020-09-08 21:14:49 -05:00
darmac
fe05fc7fd5
Add new package: jline3 (#18548) 2020-09-08 21:14:00 -05:00
darmac
1ac24aca96
refine efivar install flow (#18557) 2020-09-08 21:08:38 -05:00
Jaroslav Hron
e2e90e4d6b
Update package.py (#18552)
without setting the build enviroment, the installation fails with

```
1 error found in build log:
     35946    fmtutil [INFO]: /usr/local/pkg/Installs/linux-ubuntu18.04-skylake_avx512/gcc7.4.0/texlive/20190410/rgs2nakycorkgzno/t
              exmf-var/web2c/pdftex/pdfcslatex.fmt installed.
     35947    fmtutil [INFO]: Disabled formats: 6
     35948    fmtutil [INFO]: Successfully rebuilt formats: 45
     35949    fmtutil [INFO]: Total formats: 51
     35950    fmtutil [INFO]: exiting with status 0
     35951    ==> [2020-09-07-21:23:21.482745] '/usr/local/pkg/Installs/linux-ubuntu18.04-skylake_avx512/gcc7.4.0/texlive/20190410/
              rgs2nakycorkgzno/bin/x86_64-linux/mtxrun' '--generate'
  >> 35952    /usr/bin/env: 'texlua': No such file or directory
```

May be there is a better way...
2020-09-08 21:05:18 -05:00
Garth N. Wells
af189e3ed9
Fix linking problem on macos (#18564) 2020-09-08 21:01:21 -05:00
Andrew W Elble
520308ad2b
astra: update checksum, add other executables (#18567) 2020-09-08 21:00:27 -05:00
Tom Payerle
7165795c4a
libxmms: add python build dependency (#18566) (#18568)
Build of libxmms requires python, but not in spack dependency list.
See  #18566
2020-09-08 20:59:22 -05:00
Michael Kuhn
017331684e
go: Add 1.15.1 and 1.14.8 (#18575) 2020-09-08 20:56:08 -05:00
Michael Kuhn
e43855bc8f
node-js: Add 14.10.0 and 12.18.3 (#18576) 2020-09-08 20:55:40 -05:00
Michael Kuhn
9c4d79f8cd
npm: Add 6.14.8 (#18577) 2020-09-08 20:55:12 -05:00
Adam J. Stewart
2f4d493744
Cython: add setuptools run-dependency (#18572)
Cython requires a library that is available in Python 3.8, or before
Python 3.8 with setuptools. This specifies that setuptools is a run
dependency to allow running with Python < 3.8
2020-09-08 17:27:49 -07:00
Tamara Dahlgren
6b30cd18d6
Update cray-libsci homepage and install error (#18581) 2020-09-08 16:22:25 -06:00
Michal Sudwoj
7205a75427
Added nvptx variant to rust (#18209)
Co-authored-by: Andrew Gaspar <andrew.gaspar@outlook.com>

Co-authored-by: Andrew Gaspar <andrew.gaspar@outlook.com>
2020-09-08 11:28:59 -05:00
Gvozden Neskovic
c2b33b4444
gromacs: add zen2 target SIMD optimizations (#18551)
Co-authored-by: Gvozden Nešković <neskovic@dev06.compeng.uni-frankfurt.de>
2020-09-08 06:52:56 -06:00
Piotr Luszczek
73110b415d
hpcc: add explicit C99 flag for older GCC versions (#18556) 2020-09-08 08:30:02 +02:00
Mark W. Krentel
850924e423
hpctoolkit: adjust some dependencies (#18558)
Hpctoolkit master and upcoming releases now want the +pic variant for
two dependencies, libunwind and xz.
2020-09-08 08:27:39 +02:00
Axel Huebl
64273da2cc
openPMD-api: added v0.12.0 (#18560) 2020-09-08 08:18:21 +02:00
jthies
dcee0a1d5d
phist: added v1.9.1 (#18529) 2020-09-07 17:52:07 +02:00
ketsubouchi
03a808ec2d
kim-api: add support for Fujitsu compilers (#18533) 2020-09-07 17:47:55 +02:00
Andre Sailer
138e2ad0a1
[LCIO]: changes to install/CPATH for python bindings (#18512) 2020-09-07 10:16:16 -05:00
darmac
b2b7bcd86a
Add new package: kbd (#18436)
* Add new package: kbd

* fix description error
2020-09-07 10:12:47 -05:00
Tim Haines
8b7ca5ef50
capstone: added v4.0.2 (#18534)
This also adds the git branches "master" and "next".
2020-09-07 16:04:23 +02:00
darmac
5e86a131d2
jansi: added new package at v1.18 (#18549) 2020-09-07 16:02:18 +02:00
ketsubouchi
80691fa6d5
gconf: add dependencies (#18406)
* gconf: add dependencies

* gconf: add run type to perl-xml-parser
2020-09-06 22:33:42 -05:00
Andrew W Elble
8ad581e7b3
new package: py-textblob (#18516)
* new package: py-textblob

add variant to py-nltk to allow for data download/installation
add dependencies to py-nltk so that bin/nltk works

* add resources and resource generation script
2020-09-05 11:50:03 -05:00
Satish Balay
b494f50489
petsc4py: repo is migrated from bitbucket to gitlab (#18519) 2020-09-05 10:18:48 -05:00
Massimiliano Culpo
ba257914b3
fujitsu: added new package (#18021)
The package is at the moment not installable, just detectable.

Co-authored-by: Toyohisa Kameyama <kameyama@riken.jp>
2020-09-05 10:40:52 +02:00
Ganesh Kumar
704fc475e3
ROCm3.5 miopen recipe (#18442)
* ROCm 3.5 miopen recipe

* fixing flake8 issues

* cmake variant fix

* min support fix

* variant possible values
2020-09-04 17:02:33 -05:00
Nick Booher
61ae21ee4d
energyplus: add version 9.1 (#18485) 2020-09-04 16:13:53 -05:00
mic84
c5e50b73ef
amrex:: new version 20.09 (#18486) 2020-09-04 16:13:20 -05:00
Tom Payerle
2cc7718edd
bml: Add build dependency on python (#18489) (#18491)
At some point in the build phase a script
spack-src/scripts/convert-template
has a shebang looking for python in the path.

Currently this picks up system python if in invoker's path, but should
be using python from spack, so add a build dependency on python.
2020-09-04 16:12:53 -05:00
Michael Kuhn
518372ccd1
mariadb-c-client: Add 3.1.9 (#18501) 2020-09-04 16:03:43 -05:00
Michael Kuhn
ca2760381b
py-setuptools: Add 50.1.0 and 49.6.0 (#18502) 2020-09-04 16:03:20 -05:00
Michael Kuhn
f836d93da1
rocksdb: Add 6.11.4 (#18503) 2020-09-04 16:01:30 -05:00
Michael Kuhn
f2adf531b3
glib: Add 2.64.5 (#18505) 2020-09-04 16:00:07 -05:00
Michael Kuhn
262edde2c1
libbson, mongo-c-driver: Add 1.17.0 (#18506) 2020-09-04 15:59:43 -05:00
Michael Kuhn
14983401a1
libidn2: Add 2.3.0 (#18507) 2020-09-04 15:59:16 -05:00
Michael Kuhn
972caba882
curl: Add 7.72.0 (#18508) 2020-09-04 15:58:52 -05:00
Michael Kuhn
53bf97298f
gettext: Add 0.21 (#18509) 2020-09-04 15:58:30 -05:00
iarspider
0c03248537
Add madgraph 2.8.0; fix recipe (#18510) 2020-09-04 15:58:04 -05:00
Luke Dalessandro
8e41208c65
Build libtinfo.so "--with-versioned-syms" when it is enabled in ncurses. (#18511)
Many system-installed binaries (at least in Debian) are built against a
libtinfo.so that has versioned symbols. If spack builds a version without this
functionality, and it winds up in the user's LD_LIBRARY_PATH via spack load,
system binaries will begin to complain.

```
$ less log.txt
less: /opt/spack/.../libtinfo.so.6: no version information available (required by less)
```

Co-authored-by: Luke D'Alessandro <ldalessa@uw.edu>
2020-09-04 15:54:44 -05:00
Andrew W Elble
f4d3a1a0cb
new package: py-markovify (#18517) 2020-09-04 15:46:38 -05:00
t-nojiri
f3c4747318
fermikit: added support for aarch64 (#18480) 2020-09-04 19:52:10 +02:00
Adam J. Stewart
6fcec1dcff
Python: default to Python 3.8 (#17798) 2020-09-03 16:15:43 -07:00
Adam J. Stewart
0eca977cc9
py-pillow-simd: fix concretization (#18490) 2020-09-03 15:36:20 -07:00
Adam J. Stewart
7d9f2bf4ed
depends_on cannot handle ^ sigil (#18220)
* depends_on cannot handle ^ sigil

* cardioid+mfem+cuda requires hypre+cuda

* Document this limitation

* Move warning message to Known Issues docs

* Better handling of parmetis dep
2020-09-03 17:31:00 -05:00
Adam J. Stewart
7728b0737b
Add new MavenPackage build system base class (#18185)
* Add new MavenPackage build system base class

* Fix flake8 and doc tests

* More specific regex

* Java 8 required for these packages
2020-09-03 17:30:39 -05:00
Adam J. Stewart
741bb9bafe
install/install_tree: glob support (#18376)
* install/install_tree: glob support

* Add unit tests

* Update existing packages

* Raise error if glob finds no files, document function raises
2020-09-03 10:47:19 -07:00
Adam J. Stewart
098beee295
Pillow-SIMD: use as default PIL provider (#18097)
* Pillow-SIMD: use as default PIL provider

* Fix concretization of pil

* Fix build of older versions of pillow
2020-09-03 10:39:35 -07:00
Michael Kuhn
8c264a9f26
freetype: Add custom headers property (#18440)
freetype's headers are installed in the `freetype2` subdirectory, use a
custom headers property to fix this in dependent packages.
2020-09-03 11:32:41 -05:00
t-nojiri
3a562c0cec
fermi: added patch to support aarch64 (#18479) 2020-09-03 10:06:15 +02:00
psakievich
7c0b356e79
Add test tolerance variant to nalu-wind pkg (#18455)
* Add test tolerance variant to nalu-wind pkg

* flake8 fixes
2020-09-02 20:31:58 -05:00
Gabriel Rockefeller
ced0a8f068
eospac: add version 6.4.1 (#18476) 2020-09-02 20:28:48 -05:00
Andrew W Elble
879bb063f7
new package: corenlp (#18467)
* new package: corenlp

* import os, not os.path
2020-09-02 20:27:56 -05:00
Robert Blake
638f44d842
CUDA_HOME needs to be set, or CUDA is found based on user's PATH. (#18475) 2020-09-02 19:52:00 -05:00
Harmen Stoppels
6d87cbdb52
Add rocm 3.7.0 libs (#18366)
* Add rocm 3.7.0 libs

* Make 3.7.0-only dependency on numactl explicit

* Add rocm-device-libs dep to rocm-clang-ocl

* Update the cmakelists dir in rocm-debug-agant

* Make rocm-debug-agent work on 3.7.0

* Disable tensile host; following rocm-arch recommendations
2020-09-02 19:50:05 -05:00
Adam J. Stewart
443407cda5
Add new RubyPackage build system base class (#18199)
* Add new RubyPackage build system base class

* Ruby: add spack external find support

* Add build tests for RubyPackage
2020-09-02 16:26:36 -07:00
Chris White
e22a0ca5cf
mfem: fix transitive hdf5 static libs (#18457) 2020-09-02 15:06:45 -07:00
Adam J. Stewart
6b20687b26
python: switch to +uuid by default (#18252) 2020-09-02 14:46:58 -07:00
Jose E. Roman
601f97d8a5
New patch release SLEPc 3.13.4 (#18466) 2020-09-02 15:24:07 -05:00
Rémi Lacroix
447ea50bf9
Aria2: Add version 1.35.0. (#18465) 2020-09-02 15:23:40 -05:00
Adam J. Stewart
ba317b01c3
Packages: headers should be lists (#18445) 2020-09-02 13:19:22 -07:00
Nick Booher
0116c44714
ldak: new package at 5.1 (#18431)
* ldak: new package at 5.1

* flake8

* Re-run tests

* Apply suggestions from code review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-02 11:29:40 -05:00
Auriane R
24843844ae
Add HPX 1.5.0 release and update the homepage (#18464) 2020-09-02 10:34:05 -05:00
Sinan
e5fdb2a46c
new package: py-python-fmask (#18382)
* new package: py-python-fmask

* flake8

* add missing dependency

Co-authored-by: sbulut <sbulut@3vgeomatics.com>
Co-authored-by: Sinan81 <Sinan81@earth>
2020-09-02 10:29:02 -05:00
Sinan
712e7bd2bf
new package: py-gitdb (#18386)
* new package: py-gitdb

* Update var/spack/repos/builtin/packages/py-gitdb/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

Co-authored-by: sbulut <sbulut@3vgeomatics.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-02 10:28:33 -05:00
Jordan Moxon
aa8e046073
Add blaze versions 3.6-3.8 (#18424) 2020-09-02 10:15:38 -05:00
darmac
f268f65733
Add new package: rasdaemon (#18434) 2020-09-02 10:08:34 -05:00
Gvozden Neskovic
1e05321c8f
gromacs: add support for opencl build (#18461)
Co-authored-by: Gvozden Nešković <neskovic@dev06.compeng.uni-frankfurt.de>
2020-09-02 09:07:43 -06:00
Seth R. Johnson
d904c57d2b
Flibcpp: update version (#18448)
Update available versions and add Fortran check
2020-09-02 11:07:10 -04:00
Paul
1b78a010d8
Updated Hugo package. (#18443)
* Set GOPATH in build environment to avoid creating files in the user's
default GOPATH (e.g. ~/go).
* Support for external find.
* Added latest releease 0.74.3.
2020-09-02 10:03:56 -05:00
ketsubouchi
1026ace6b6
r-boot: checksum mismatch @1.3-23 (#18458) 2020-09-02 10:00:12 -05:00
Weston Ortiz
bf2ded5269
Add gdb TUI variant (#18459) 2020-09-02 09:59:19 -05:00
Mark Olesen
5c94827201
scotch: update to 6.0.10 (released 31-AUG-2020) (#18462)
- added gitlab location, updated the homepage location

Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2020-09-02 09:57:48 -05:00
Seth R. Johnson
9e51b8d165
New package: ForTrilinos (#18456)
Remove prior built-in Trilinos subrepository.

Added a Trilinos conflict discovered while documenting ForTrilinos:
```
   ***
   *** ERROR: Setting Trilinos_ENABLE_SEACASExodus=OFF which was 'ON' because SEACASExodus has a required library dependence on disabled TPL Netcdf!
   ***
```
2020-09-02 08:14:20 -04:00
Axel Huebl
0740a4ac7e
ADIOS: Fix no-MPI Build (#18453)
Do not apply this patch in no-MPI builds. I think this autotools
check logic is generally borked, this will just set it manually to
on/off now.
2020-09-01 18:17:51 -07:00
t-nojiri
ae3f3887a6
ccs-qcd: Change compile option for aarch64 (#17516)
* ccs-qcd: Change compile option for aarch64
2020-09-01 18:03:47 -07:00
Rao Garimella
ea97b37f60
Jali: Fix bugs in CMake section (#18447)
Fix variant name and cmake variable.

Co-authored-by: Rao Garimella <rao@abyzou.lanl.gov>
2020-09-01 15:18:24 -04:00
Jen Herting
e7f1eeb7af
Update dependencies: py-torch-geometric (#18265)
* [py-torch-geometric] depends on py-torch-sparse

* [py-torch-geometric] setting TORCH_CUDA_ARCH_LIST

* [py-torch-geometric] added the rest of the dependencies

* [py-torch-geometric] added cuda variant and added more build env vars

* [py-torch-geometric] added variant info for depenedencies

* [py-torch-geometric] flake8

* [py-torch-geometric] add variant description
2020-09-01 13:44:12 -05:00
darmac
f9a330ae99
Add new package: efivar (#18392) 2020-09-01 10:09:59 -05:00
Nikolay Simakov
12078382b6
Added HPC Challenge Benchmark (#18323)
* HPCC Benchmark: added HPC Challenge (HPCC) benchmark

* HPCC Benchmark: modified error message on lack of fftw2 interface in MKL

* hpcc: fixed styling add one more installation example

* hpcc: styling fix

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* hpcc: changed include and lib location setter

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* hpcc: fixed styling add one more installation example

* hpcc: removed readme.md

* hpcc: develop repo now is in github

* hpcc: march arguments are set explicitly in case of intel compilers, added -restrict flag, which needed for older intel compilers (at least <=19.0.5.281)

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-09-01 09:59:06 -05:00
ketsubouchi
3a5746c6c7
orbit2: new package at v2.14.19 (#18405) 2020-09-01 13:11:55 +02:00
darmac
3701633937
fuse-overlayfs: added new package at v1.1.2 (#18435) 2020-09-01 08:28:27 +02:00
Joseph Wang
ebeb8fb8df
ocaml: allow v4.08 and v4.09 to build with gcc10 (#18254)
fixes #18228.  

This patch doesn't cover all old versions but it allows packages like whizard to build.
2020-09-01 05:53:13 +02:00