Commit graph

611 commits

Author SHA1 Message Date
eugeneswalker
82cfa68e69
e4s: add omega-h +cuda (#32156) 2022-10-05 09:36:09 -07:00
eugeneswalker
27074d5bec
e4s ci: add unifyfs (#32991) 2022-10-05 09:28:19 -07:00
eugeneswalker
b57d24a5e1
e4s: add vtk-m +rocm (#32151) 2022-10-04 12:28:24 -07:00
kwryankrattiger
a01c36da45
Install: Add use-buildcache option to install (#32537)
Install: Add use-buildcache option to install

* Allow differentiating between top level packages and dependencies when
determining whether to install from the cache or not.

* Add unit test for --use-buildcache

* Use metavar to display use-buildcache options.

* Update spack-completion
2022-09-29 13:48:06 -05:00
eugeneswalker
87b014ed13
e4s: use ubuntu 20.04 image and %gcc@9.4.0 (#32795) 2022-09-27 16:25:56 -06:00
Massimiliano Culpo
ecce657509 Remove "tut" from the "build-systems" pipeline
PR #32615 deprecated Python versions up to 3.6.X. Since
the "build-systems" pipeline requires Python 3.6.15 to
build "tut", it will fail on the first rebuild that
involves Python.

The "tut" package is meant to perform an end-to-end
test of the "Waf" build-system, which is scarcely
used. The fix therefore is just to remove it from
the pipeline.
2022-09-26 14:47:13 +02:00
Harmen Stoppels
2fa9aff206
gitlab: cuda not compatible amazon linux 2 (#32678)
amazon linux 2 ships a glibc that is too old to work with cuda toolkit
for aarch64.

For example:

`libcurand.so.10.2.10.50` requires the symbol `logf@@GLIBC_2.27`, but
glibc is at 2.26.

So, these specs are removed.
2022-09-23 11:01:59 +02:00
Zack Galbreath
4ebdc5643e
Revert "e4s ci: restore power builds (#32296)" (#32633)
This reverts commit 0d18c32bca.
2022-09-14 03:26:26 +00:00
eugeneswalker
bf84cdfcbe
e4s: add py-torch +cuda (#32601) 2022-09-12 09:40:49 +00:00
Massimiliano Culpo
1427ddaa59
ci: restore coverage computation (#32585)
* ci: restore coverage computation

* Mark "test_foreground_background" as xfail

* Mark "test_foreground_background_output" as xfail

* Make number of processes explicit, remove verbosity on linux

* Run coverage on just 3 Python jobs for linux

* Run coverage on just 3 Python jobs for linux

* Run coverage on just 2 Python jobs for linux

* Add back verbose, since before we didn't encounter the xdist internal error

* Reduce the workers to 2

* Try to use command line
2022-09-10 07:25:44 -06:00
eugeneswalker
0d18c32bca
e4s ci: restore power builds (#32296) 2022-09-08 21:00:58 -07:00
Massimiliano Culpo
67534516c7
ci: avoid running coverage on package only PRs (#32573)
* ci: remove !docs from "core" filters

Written like it is now it causes package only PRs
to run with coverage.

* Try to skip job under condition, see if the workflow proceed

* Try to cancel a running CI job

* Simplify linux unit-tests, skip windows unit-tests on package PRs

* Reduce the inputs to unit-tests workflow

* Move control logic to main workflow, remove inputs

* Revert "Move control logic to main workflow, remove inputs"

This reverts commit 0c46fece4c49eb7a37585ec3ba651a31d7f958af.

* Do not compute "with_coverage" since it's always == to "core"

* Remove workflow dispatch from unit tests

* Revert "Revert "Move control logic to main workflow, remove inputs""

This reverts commit dd4e4a4e61a825901e736348fd044d37e88c90b5.

* Try to skip all from the main workflow

* Add back bootstrap to needed checks for "all"

* Restore the correct logic for conditionals
2022-09-08 10:58:53 -07:00
Tom Scogland
762ba27036
Make GHA tests parallel by using xdist (#32361)
* Add two no-op jobs named "all-prechecks" and "all"

These are a suggestion from @tgamblin, they are stable named markers we
can use from gitlab and possibly for required checks to make CI more
resilient to refactors changing the names of specific checks.

* Enable parallel testing using xdist for unit testing in CI

* Normalize tmp paths to deal with macos

* add -u flag compatibility to spack python

As of now, it is accepted and ignored.  The usage with xdist, where it
is invoked specifically by `python -u spack python` which is then passed
`-u` by xdist is the entire reason for doing this.  It should never be
used without explicitly passing -u to the executing python interpreter.

* use spack python in xdist to support python 2

When running on python2, spack has many import cycles unless started
through main.  To allow that, this uses `spack python` as the
interpreter, leveraging the `-u` support so xdist doesn't error out when
it unconditionally requests unbuffered binary IO.

* Use shutil.move to account for tmpdir being in a separate filesystem sometimes
2022-09-07 20:12:57 +02:00
Harmen Stoppels
80389911cc
Update bootstrap buildcache to v0.3 (#32262)
This release allow to bootstrap patchelf from binaries.
2022-09-02 12:48:46 +02:00
Scott Wittenburg
6239198d65
Fix cause of checksum failures in public binary mirror (#32407)
Move the copying of the buildcache to a root job that runs after all the child
pipelines have finished, so that the operation can be coordinated across all
child pipelines to remove the possibility of race conditions during potentially
simlutandous copies. This lets us ensure the .spec.json.sig and .spack files
for any spec in the root mirror always come from the same child pipeline
mirror (though which pipeline is arbitrary).  It also allows us to avoid copying
of duplicates, which we now do.
2022-09-01 15:29:44 -06:00
Peter Scheibel
2968ae667f
New command, spack change, to change existing env specs (#31995)
If you have an environment like

```
$ cat spack.yaml
spack:
  specs: [openmpi@4.1.0+cuda]
```

this PR provides a new command `spack change` that you can use to adjust environment specs from the command line:

```
$ spack change openmpi~cuda
$ cat spack.yaml
spack:
  specs: [openmpi@4.1.0~cuda]
```

in other words, this allows you to tweak the details of environment specs from the command line.

Notes:

* This is only allowed for environments that do not define matrices
  * This is possible but not anticipated to be needed immediately
  * If this were done, it should probably only be done for "named"/not-anonymous specs (i.e. we can change `openmpi+cuda` but not spec like `+cuda` or `@4.0.1~cuda`)
2022-09-01 11:04:01 -07:00
Massimiliano Culpo
01298287f6
Fix CI for package only PRs (#32473) 2022-09-01 14:41:28 +02:00
Robert Cohn
c56abe4247
oneapi e4s: use require: to force gcc build for some packages (#32309) 2022-08-24 16:22:02 -04:00
Tamara Dahlgren
3c3b18d858
spack ci: add support for running stand-alone tests (#27877)
This support requires adding the '--tests' option to 'spack ci rebuild'.
Packages whose stand-alone tests are broken (in the CI environment) can
be configured in gitlab-ci to be skipped by adding them to
broken-tests-packages.

Highlights include:
- Restructured 'spack ci' help to provide better subcommand summaries;
- Ensured only one InstallError (i.e., installer's) rather than allowing
  build_environment to have its own; and
- Refactored CI and CDash reporting to keep CDash-related properties and
  behavior in a separate class.

This allows stand-alone tests from `spack ci` to run when the `--tests`
option is used.  With `--tests`, stand-alone tests are run **after** a
**successful** (re)build of the package.  Test results are collected
and report(able) using CDash.

This PR adds the following features:
- Adds `-t` and `--tests` to `spack ci rebuild` to run stand-alone tests;
- Adds `--fail-fast` to stop stand-alone tests after the first failure;
- Ensures a *single* `InstallError` across packages
    (i.e., removes second class from build environment);
- Captures skipping tests for externals and uninstalled packages
    (for CDash reporting);
- Copies test logs and outputs to the CI artifacts directory to facilitate
    debugging;
- Parses stand-alone test results to report outputs from each `run_test` as
    separate test parts (CDash reporting);
- Logs a test completion message to allow capture of timing of the last
    `run_test` part;
- Adds the runner description to the CDash site to better distinguish entries
    in CDash tables;
- Adds `gitlab-ci` `broken-tests-packages` to CI configuration to skip
    stand-alone testing for packages with known issues;
- Changes `spack ci --help` so description of each subcommand is a single line;
- Changes `spack ci <subcommand> --help` to provide the full description of
    each command (versus no description); and
- Ensures `junit` test log file ends in an `.xml` extension (versus default where
    it does not).

Tasks:

- [x] Include the equivalent of the architecture information, or at least the host target, in the CDash output
- [x] Upload stand-alone test results files as  `test` artifacts
- [x] Confirm tests are run in GitLab
- [x] Ensure CDash results are uploaded as artifacts
- [x] Resolve issues with CDash build-and test results appearing on same row of the table 
- [x] Add unit tests  as needed
- [x] Investigate why some (dependency) packages don't have test results (e.g., related from other pipelines)
- [x] Ensure proper parsing and reporting of skipped tests (as `not run`) .. post- #28701 merge
- [x] Restore the proper CDash URLand or mirror ONCE out-of-band testing completed
2022-08-23 00:52:48 -07:00
Robert Cohn
00b244853e
enable packages that use numpy for oneapi e4s stack (#32293)
* enable geopm oneapi

* enable packages that depend on py-numpy

* disable nan warnings

* undo geopm enable

* undo geopm, it has multiple compile issues
2022-08-22 07:02:22 -07:00
sparkyniner
21e6679056
spack list: add --tag flag (#32016)
* modified list.py and added functionality for --tag

* Removed long and very long, shifted rest of code above return statement

* removed results variable

* added import statement at top

* added the line accidentally deleted

* added line accidentally deleted

* changed p.name to p, added line inside if statement

* line order switched

* [@spackbot] updating style on behalf of sparkyniner

* ran update completion command

* add tests

* Update lib/spack/spack/test/cmd/list.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* [@spackbot] updating style on behalf of sparkyniner

* changed argument to mock_packages and moved code under filter by tag

* removed bad rebase code and added additional test

* [@spackbot] updating style on behalf of sparkyniner

* added line removed earlier

* added line removed earlier

* replaced function

* added more recommended changes

Co-authored-by: sairaj <sairaj@sairajs-MacBook-Pro.local>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-08-20 16:09:44 -06:00
eugeneswalker
e1bce8c577
e4s %oneapi: add aml +ze (level zero) (#32161) 2022-08-19 08:25:15 -07:00
eugeneswalker
a42a874faa
e4s oneapi: compiler environment: prepend lib dir to LD_LIBRARY_PATH (#32227) 2022-08-19 06:30:18 -04:00
eugeneswalker
022d59f4a5
e4s: add dealii +cuda (#32159) 2022-08-18 22:41:57 -06:00
eugeneswalker
b2d1d07d2e
e4s %oneapi: add amrex +sycl (#32162) 2022-08-18 18:16:55 -07:00
Robert Cohn
1cdc50e3f6
ascent: fix oneapi build (#32239) 2022-08-18 17:15:39 +00:00
Massimiliano Culpo
7f81a0a25e
CI: move nightly macOS builds from GA to pipelines (#32231)
Modifications:
- [x] Delete the `macOS builds nightly` workflow
- [x] Removed shield in README.md
- [x] Moved corresponding specs to `e4s-macos`
2022-08-18 09:13:37 +00:00
eugeneswalker
d8689b5038
e4s mac ci: try lambda, the new mac studio runner (#32169) 2022-08-17 21:24:47 +00:00
eugeneswalker
5fe8ccca3a e4s oneapi stack: remove notes for now-fixed builds (#31839) 2022-08-17 13:57:13 +02:00
Massimiliano Culpo
6979d47cb6
CI: reduce the amount of tests run in the original concretizer (#32179)
* CI: reduce the amount of tests run in the original concretizer
* Don't test Python 3.6 on the original concretizer
2022-08-17 09:16:19 +02:00
eugeneswalker
0d7a6ec410
e4s: add flecsi +cuda (#32158) 2022-08-16 13:00:03 +00:00
eugeneswalker
fe77cc9b27
e4s: add ascent +cuda (#32153) 2022-08-16 10:47:17 +00:00
eugeneswalker
9bc537bb89
e4s: add amrex +cuda (#32152) 2022-08-16 09:08:26 +00:00
eugeneswalker
2c42ab45a0
e4s: add papi +rocm (#32150) 2022-08-16 08:26:06 +00:00
eugeneswalker
934db62541
e4s: add caliper +rocm (#32149) 2022-08-16 07:52:09 +00:00
eugeneswalker
43c0dac6f6
unifyfs %oneapi: add CFLAGS=-Wno-unused-function to build environment (#32107) 2022-08-15 10:43:39 -07:00
eugeneswalker
5bffd371e7
e4s ci: enable trilinos@13.4.0 +cuda build, issues resolved (#32124) 2022-08-15 09:06:03 -07:00
eugeneswalker
ad51e7d9f0
e4s ci: enable hpctoolkit +rocm (#32126) 2022-08-15 09:05:34 -07:00
eugeneswalker
4ec31003aa
e4s oneapi ci: enable hpx due to merged PR #32097 (#32117) 2022-08-12 23:41:53 -06:00
eugeneswalker
ffb63ca933
e4s oneapi: build tau %oneapi ^binutils%gcc (#32106) 2022-08-12 20:01:04 -07:00
Scott Wittenburg
cb19ca2471
gitlab ci: Make sure PR pipelines can push to buildcache (#32014)
On PR pipelines we need to override the buildcache destination to
point to the "spack-binaries-prs" bucket, otherwise, those pipelines
try to push to the default mirror in a bucket for which they don't
have write permission.
2022-08-12 16:53:59 +00:00
renjithravindrankannath
08e75f7a3e
rocm: add v5.2 for the entire stack (#31591) 2022-08-12 09:20:47 +02:00
Harmen Stoppels
ceda5fb46c
Don't set LD_LIBRARY_PATH by default on Linux (#28354)
`LD_LIBRARY_PATH` can break system executables (e.g., when an enviornment is loaded) and isn't necessary thanks to `RPATH`s.  Packages that require `LD_LIBRARY_PATH` can set this in `setup_run_environment`.

- [x] Prefix inspections no longer set `LD_LIBRARY_PATH` by default
- [x] Document changes and workarounds for people who want `LD_LIBRARY_PATH`
2022-08-11 09:33:08 -05:00
eugeneswalker
9215d59599
axom@0.6.1 %oneapi: patch examples (#31991)
* axom@0.6.1 %oneapi: patch examples

* uncomment axom%oneapi ci build now that it is fixed
2022-08-08 19:39:32 +00:00
eugeneswalker
e5eabe0cf6
e4s oneapi ci: unify when possible (#31965) 2022-08-08 09:22:32 +02:00
Massimiliano Culpo
9a48035e49 asp: refactor low level API to permit the injection of configuration
This allows writing extension commands that can benchmark
different configurations in clingo, or try different
configurations for a single test.
2022-08-03 18:01:08 -07:00
eugeneswalker
2b04c4f840
sundials@6.1.0:6.2.0 +rocm: patch nvector to use pic (#31910)
* sundials@6.1.0:6.2.0 +rocm: patch nvector to use pic

* e4s ci: add sundials +rocm
2022-08-03 16:01:59 -06:00
eugeneswalker
0462818c2e
e4s oneapi ci: build vtk-m ~openmp due to issue #31830 (#31840) 2022-08-02 14:45:58 -07:00
eugeneswalker
b3f221185e
butterflypack %oneapi: patch CMakeLists to solve issue #31818 (#31848)
* butterflypack %oneapi: patch CMakeLists to solve issue #31818

* uncomment builds affected by failing butterflypack

Co-authored-by: e <e>
2022-08-02 14:02:00 -06:00
eugeneswalker
0fc045392b
e4s oneapi stack: remove notes for now-fixed builds (#31839) 2022-08-01 12:03:39 -07:00