Commit graph

6248 commits

Author SHA1 Message Date
Ben Boeckel
6574ec3143 stage: remove a rogue period (#3846) 2017-04-14 17:51:54 -05:00
George Hartzell
2ed2469b11 Add a package for FLASh (bioinformatics) (#3848)
Add a package for FLASh.
2017-04-14 17:51:36 -05:00
Adam J. Stewart
acad217cba Add a py-pkgconfig package (#3815) 2017-04-14 13:14:45 -05:00
George Hartzell
a4311f242a vim wasn't linking against ncurses (#3838)
See #3829.  Vim's configure was searching for ncurses
instead of ncursesw.
2017-04-14 13:13:36 -05:00
Christoph Junghans
9626a042f8 New package: PEGTL (#3839) 2017-04-14 13:13:15 -05:00
Christoph Junghans
ef64734192 New package: pstreams (#3840) 2017-04-14 12:18:49 -05:00
Jean-Paul Pelteret
a0217747d0 Readline package: Add ncurses library directory to link line. (#3802)
Resolves a issue with finding the ncurses library on MacOS.
2017-04-14 12:17:45 -05:00
Christoph Junghans
9922c374aa New package: MAD's numdiff (#3811) 2017-04-14 11:18:32 -05:00
Adam J. Stewart
5ce0126c91 Prevent users from building Score-P on macOS (#3825)
* Prevent users from building Score-P on macOS

* Add link to original reporting issue
2017-04-14 08:38:34 -07:00
Adam J. Stewart
3f21b82815 Add variant to mvapich2 to control thread level (#3832) 2017-04-14 08:14:19 -07:00
Adam J. Stewart
331f42b991 Convert Image-Magick to AutotoolsPackage (#3828) 2017-04-14 08:13:47 -07:00
Adam J. Stewart
bec6d99b15 Add documentation on explicit param for do_install (#3823) 2017-04-14 08:13:14 -07:00
Mario Melara
0405505e21 Quick fix for #3153 (#3822) 2017-04-14 07:56:51 -07:00
Adam J. Stewart
91d82c44e6 Remove mawk dependency from ncurses (#3782) 2017-04-14 09:38:13 -05:00
健美猫
102dcbcbd4 Add cub-1.4.1 required by cntk. (#3819) 2017-04-14 08:29:18 -05:00
健美猫
e636bf05fc A new package: bowtie. (#3837) 2017-04-14 08:16:51 -05:00
Christoph Junghans
c08965701f New package: h5part (#3821) 2017-04-13 15:00:17 -05:00
Christoph Junghans
90f46186f9 New package: pugixml (#3830) 2017-04-13 14:59:32 -05:00
Michael Kuhn
afdc2f4182 Fix adios (#3814)
adios currently only supports zfp <= 0.5.0 due to an API change.
2017-04-12 16:58:18 -05:00
George Hartzell
5b65380f98 Add package for nginx@1.12.0 (#3810)
* Add package for nginx@1.12.0

Includes support for:
- zlib
- pcre (and pcre-jit)
- openssl (https support)

Built and basics tested on CentOS 7.  I haven't tested the `https`
support [yet].

* Include final bit of doc string sentence.

I trimmed the docstring that I lifed from https://nginx.org/en a bit
too aggressively and left a '...' to remind me to fix it.

Apparently I need more obvious reminders.

Thanks @davydden!
2017-04-12 15:27:46 -05:00
Adam J. Stewart
e12e9996e4 Document commands that no longer work (#3781) 2017-04-12 10:46:00 -05:00
Jean-Paul Pelteret
0af57ce345 Apply a patch to allow valgrind 3.12 to build on MacOS >= 10.11 (#3808) 2017-04-12 07:43:14 -05:00
Javier
7203a3c055 Update xrootd versions (#3807)
* Update xrootd versions

* Removing unnecessary url_for_version method
2017-04-12 06:50:31 -05:00
Nils Deppe
701965fb2a brigand: New Package (#3801) 2017-04-11 22:14:54 -05:00
Christoph Junghans
56ae607a39 New package: f90cache (#3804) 2017-04-11 20:13:41 -05:00
Nils Deppe
d7b5726fdc blaze: New Package (#3803) 2017-04-11 17:08:26 -05:00
Gregory Lee
9a4077c272 added stat version 3.0.1 (#3800) 2017-04-11 14:10:09 -05:00
Adam J. Stewart
ed86dc2db6 Help cscope find ncursesw library (#3785)
* Help cscope find ncursesw library

* Overwrite CURSES_LIBS at build time
2017-04-11 14:09:29 -05:00
Erik Schnetter
cea4352555 spherepack: New package (#3797) 2017-04-11 13:15:41 -05:00
Erik Schnetter
4d18f9f233 pocl: New version 0.14 (#3799) 2017-04-11 13:15:19 -05:00
Javier
e55c9a0eb8 Update ccache version to 3.3.4 (#3794)
* Update ccache version to 3.3.4

* Flake8 fix
2017-04-11 09:32:31 -05:00
George Hartzell
47aa8053e9 Install the shell completion scripts (#3784)
* Install the shell completion scripts

Install the `git-completion.{bash,tcsh,zsh}` and `git-prompt.sh` into
`$(spack location -i git)/share/` (aka `prefix.share/`).

* Use copy_tree to copy all the files

The dest dir already exists, so install_tree()'s not an option.
2017-04-11 07:39:03 -05:00
healther
74b1f2b860 Fixup gcc@4.9{0,1,2} build on darwin (#3789) 2017-04-11 07:37:44 -05:00
Brian Van Essen
808e9b4649 Added a package for the MDAnalysis toolkit. (#3576)
* Added a package for the MDAnalysis toolkit.

* Added the dependency on setuptools.

* Added the rest of the dependencies to the py-mdanalysis package.  Also
added the griddataformats and seaborn packages to satisfy requirements.

* Removed seaborn package since it has been recently added.

* Fixed flake8 error

* Removed inadvertent commits.

* Cleaned up reviewers feedback.
2017-04-10 21:02:32 -05:00
Adam J. Stewart
4627655704 Rename libson-c to json-c, add new version (#3776) 2017-04-10 15:09:59 -05:00
George Hartzell
4acc36d188 Fix build, add version info for 1.3.0 (#3773)
Update the package recipe w.r.t. AutotoolsPackage changes,
now builds "out of source".

Update the package with version info for 1.3.0.

> Mosh 1.3.0 released, with John Hood as release lead. The release includes broader platform compatibility, robustness improvements, better testing, and fixes for excess CPU consumption in some cases. We have switched to semver.org-style versioning and will increment the minor version number whenever we add new functionality. (In our previous practice, this release would probably have been called “1.2.7.”)

Tested on CentOS 7.
2017-04-10 11:12:49 -05:00
Denis Davydov
c9da92dc97 doc: start with known issues section (#3722) 2017-04-10 08:20:57 -05:00
healther
5008973d99 Fix namespaced python packages (#3757)
* Fix namespaced python packages

* Update package.py

* Update package.py

* fix typo
2017-04-10 08:12:57 -05:00
健美猫
77673f4c42 A new package: cudnn. (#3770) 2017-04-10 07:27:15 -05:00
Adam J. Stewart
8e4ada5e99 Make it more clear that version ranges are inclusive (#3759) 2017-04-10 07:25:48 -05:00
健美猫
87818abf21 A new pacakge: hstr(hh). (#3769) 2017-04-09 11:56:49 -05:00
Adam J. Stewart
bd9213a55f Append system PKG_CONFIG_PATH on Cray instead of prepend (#3766) 2017-04-08 20:50:16 -05:00
Michael Kuhn
b91bf0e067 Update libbson and libmongoc to 1.6.2 (#3767) 2017-04-08 06:40:55 -05:00
George Hartzell
bf9dcc4a10 Add info for go@1.8.1 (#3765) 2017-04-07 16:50:08 -05:00
Mark C. Miller
a2afe984c0 Adding ZFP version 0.5.1 and variant for uint8 bit stream word type (#3753)
* adding 0.5.1 and variant for uint8 bit stream word type

* Revisions as per davydden

* fixing style (flake8) issues

* - switched to derive from MakefilePackage
- fixed typo in variant check
- Confirmed installs correctly with bswtuint8 variant

* added build method; changed zfp_incdir to incdir
2017-04-07 15:00:32 -05:00
Massimiliano Culpo
28e20313ac lmod: added new version (#3763) 2017-04-07 14:32:32 -05:00
Todd Gamblin
d995f9a314 Disable OpenSSL test dependency until we have proper support. (#3760) 2017-04-07 14:14:02 -05:00
Adam J. Stewart
ed4f276b68 Add a package for the NAS Parallel Benchmarks (NPB) (#3762) 2017-04-07 14:10:29 -05:00
Matthew Scott Krafczyk
7c4ed0a70a Add the rockstar package (#3680)
* Add the rockstar package

* Add rockstar to yt.

* Correct signature of prep_yt.

* Correct rockstar package installation process

Needed to change the way the necessary prefixes are found as well as
how the completed package is copied.

There should probably be a way to do the copying in a more 'spack' way.

* Add license

* Add description.

* Set no hdf5 variant as default.

* Use copy_tree for copying files

* Use MakefilePackage

* Address concerns from @adamjstewart

* Fix flake8 errors.
2017-04-07 13:17:19 -05:00
Jean-Paul Pelteret
c6777ddf74 Update LLVM to version 4.0.0 (#3683)
* Update LLVM to version 4.0.0

* Add arguments to prevent lldb, polly building when using ~<variant>
2017-04-07 13:15:14 -05:00