Garth N. Wells
43cb49d87a
py-nanonbind: add new versions ( #40161 )
2023-09-27 16:28:26 +02:00
eugeneswalker
5165524ca6
e4s cray sles: suspend ci until machine issues resolved ( #40219 )
2023-09-27 04:51:34 +02:00
Martin Aumüller
38dc3a6896
vtk: @9.2 need seacas@2022-10-14, fix macos ( #39896 )
...
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2023-09-26 13:48:44 -06:00
John W. Parent
115e448bd3
Paraview package: update freetype find patch for shared libs ( #40085 )
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VTK's (and therefore Paraview's) FindFreetype module required patching to
handle static import libraries from Freetype. However it did not cover
shared libraries. This adds support for importing shared freetype into the VTK build
2023-09-26 10:41:24 -07:00
Harmen Stoppels
5c25437c9f
spack --profile: dump to stderr ( #40209 )
2023-09-26 16:18:47 +02:00
Christoph Weber
0e72ff4a0d
ploticus: new package ( #39881 )
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Co-authored-by: Bernhard Kaindl <contact@bernhard.kaindl.dev>
2023-09-26 08:15:12 -05:00
Matt Fraser
90edd18d1f
Add NCCL v2.18.5-1 release to recipe ( #40201 )
2023-09-26 08:05:23 -05:00
Massimiliano Culpo
40dbadb868
crosstool-ng: add v1.26.0 ( #40204 )
2023-09-26 11:17:39 +02:00
Martin Aumüller
c16546bd4c
libressl: fix package & new versions ( #39741 )
2023-09-26 10:39:29 +02:00
Dom Heinzeller
143e6a4fbb
Always apply Python unixcompilers.py rpath fix, not just on cray ( #39929 )
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* Rename var/spack/repos/builtin/packages/python/cray-rpath-3.1.patch as var/spack/repos/builtin/packages/python/rpath-non-gcc.patch and apply unconditionally
* Update var/spack/repos/builtin/packages/python/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
---------
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-09-26 02:38:20 -06:00
Martin Aumüller
13816f19fd
opencv: add 4.7.0 and 4.8.0 and fix ffmpeg dependency ( #39013 )
2023-09-26 10:28:29 +02:00
Martin Aumüller
34ff3b408b
seacas: correctly limit fmt dependency ( #39756 )
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versions older than 2022-10-14 do not build with fmt@10, either:
fmt/core.h:1579:3: error: static_assert failed due to requirement 'formattable'
2023-09-26 06:35:38 +02:00
Victor A. P. Magri
aec88ef3e6
hypre: add support for magma ( #40121 )
2023-09-26 06:27:14 +02:00
snehring
9fda22d942
bcl2fastq2: patch for compiling on aarch64 ( #40195 )
2023-09-26 06:26:19 +02:00
snehring
550613ee3a
gmap-gsnap: add v2023-07-20 and aarch64 support ( #40200 )
2023-09-26 05:59:31 +02:00
Ethan Williams
5341834ebe
Elbencho: add elbencho package ( #40193 )
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* add elbencho package
* pep8 compliant
* add description
* depends on boost
* boost options
* dependencies
* fix ncurses not linking properly missing tinfo
* pep8 fix
* fix style of boost variants
* final style fix - spack style is happy
* correct cufile env variable name
---------
Co-authored-by: Ethan W <mail@ethanwilliams.xyz>
2023-09-25 18:53:28 -06:00
Alberto Invernizzi
fc027e34d1
apex: add new version 2.6.3 + deal with ompt build problem ( #40073 )
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* add new version 2.6.3
* add conflict for openmp when using gcc
2023-09-25 16:00:58 -07:00
Harmen Stoppels
aef58776b4
openssl: new versions ( #40194 )
...
apparently there was still a 1.1.1 release
2023-09-25 21:54:05 +02:00
Cameron Smith
4e17a40d09
omegah: new version ( #40192 )
2023-09-25 13:53:36 -06:00
Matthieu Dorier
d97251a4c6
spdlog: add version 1.12.0 ( #40186 )
2023-09-25 12:23:02 -07:00
snehring
2a66a67132
subread: removing mtune arg to compiler ( #40197 )
2023-09-25 12:19:25 -07:00
eugeneswalker
10fd69ec74
new package: gsibec ( #40137 )
2023-09-25 11:28:04 -06:00
Harmen Stoppels
9889a0cac6
py-numcodecs: drop upperbound, add new version, avoid native compilation ( #40183 )
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* py-numcodecs: drop upperbound, add new version, avoid native compilation
* py-numcodecs: add entrypoints
* Remove another upperbound on python
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
---------
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-09-25 07:28:32 -06:00
Harmen Stoppels
65ffd0dd63
jsoncpp: add meson build system, update package, update cmake ~ownlibs ( #39639 )
2023-09-25 10:13:30 +02:00
Bernhard Kaindl
3d2c779b87
openssh: add version 9.4p1 and fix compile issue with new zlib-1.3 ( #40174 )
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The fix for the compile issue was improved by Bernhard Kaindl.
He also added to fix two classes of other build fails:
- add missing openssl dependency version limit to older openssh versions
- add missing -fcommon for new compilers building old openssh versions
Co-authored-by: snehring <snehring@iastate.edu>
2023-09-25 08:30:10 +02:00
Harmen Stoppels
b57c2a10d4
phist: remove python 3.10 upperbound ( #40175 )
2023-09-25 08:28:13 +02:00
Diego Alvarez S
849a0a5eeb
Add opendjk 11.0.20.1+1, 17.0.8.1+1 ( #40035 )
2023-09-25 05:09:30 +02:00
Rocco Meli
7e4a6160b9
namd: Add NAMD 3.0b3 and ARM support ( #40134 )
2023-09-25 05:04:17 +02:00
dependabot[bot]
646e7b4b00
build(deps): bump black in /.github/workflows/style ( #40165 )
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Bumps [black](https://github.com/psf/black ) from 23.1.0 to 23.9.1.
- [Release notes](https://github.com/psf/black/releases )
- [Changelog](https://github.com/psf/black/blob/main/CHANGES.md )
- [Commits](https://github.com/psf/black/compare/23.1.0...23.9.1 )
---
updated-dependencies:
- dependency-name: black
dependency-type: direct:production
update-type: version-update:semver-minor
...
Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-09-24 17:48:02 +00:00
eugeneswalker
eea86c3981
new package: ecmwf-atlas ( #40136 )
2023-09-24 10:43:09 -06:00
dependabot[bot]
37c48fc82c
build(deps): bump urllib3 from 2.0.4 to 2.0.5 in /lib/spack/docs ( #40119 )
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Bumps [urllib3](https://github.com/urllib3/urllib3 ) from 2.0.4 to 2.0.5.
- [Release notes](https://github.com/urllib3/urllib3/releases )
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst )
- [Commits](https://github.com/urllib3/urllib3/compare/2.0.4...v2.0.5 )
---
updated-dependencies:
- dependency-name: urllib3
dependency-type: direct:production
update-type: version-update:semver-patch
...
Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-09-24 17:35:48 +02:00
George Young
47daba3dc1
blast-plus: add 2.14.1 ( #40179 )
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2023-09-24 09:33:38 -06:00
Brian Vanderwende
46062d98fd
visit: Add NetCDF format support ( #40065 )
2023-09-24 17:26:34 +02:00
François Trahay
4e37084ed4
EZTrace: add v2.1 ( #39748 )
2023-09-24 17:12:32 +02:00
Thomas Madlener
e7c229393d
garfieldpp: Fix the signature of setup_dependent_build_environment ( #40133 )
2023-09-24 17:04:41 +02:00
Houjun Tang
87fd9c3e93
sw4: add v3.0 ( #40146 )
2023-09-24 16:54:32 +02:00
snehring
676f2a3175
hmmer: adding new version 3.4 ( #40148 )
2023-09-24 16:53:18 +02:00
Adam J. Stewart
5fe7f5329b
py-torchvision: minimize dependencies ( #40163 )
2023-09-24 16:27:09 +02:00
Adam J. Stewart
c6a3dd03ab
py-torchmetrics: add v1.2.0 ( #40164 )
2023-09-24 16:25:34 +02:00
Hartmut Kaiser
ebdd5e28f2
flecsi: bumping HPX requirement to V1.9.1 ( #32355 )
2023-09-24 16:24:33 +02:00
dependabot[bot]
068abdd105
build(deps): bump mypy from 1.5.0 to 1.5.1 in /.github/workflows/style ( #40166 )
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Bumps [mypy](https://github.com/python/mypy ) from 1.5.0 to 1.5.1.
- [Commits](https://github.com/python/mypy/compare/v1.5.0...v1.5.1 )
---
updated-dependencies:
- dependency-name: mypy
dependency-type: direct:production
update-type: version-update:semver-patch
...
Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-09-24 16:21:41 +02:00
dependabot[bot]
9ec372a86c
build(deps): bump actions/checkout from 4.0.0 to 4.1.0 ( #40172 )
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Bumps [actions/checkout](https://github.com/actions/checkout ) from 4.0.0 to 4.1.0.
- [Release notes](https://github.com/actions/checkout/releases )
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md )
- [Commits](3df4ab11eb...8ade135a41
2023-09-24 16:08:15 +02:00
Alec Scott
5e05f6b7c6
bfs: add v3.0.2 ( #40176 )
2023-09-24 15:53:15 +02:00
Alec Scott
7988d8c67d
glab: add v1.33.0 ( #40177 )
2023-09-24 15:53:01 +02:00
Alec Scott
658a3f2fdb
hugo: add v0.118.2 ( #40178 )
2023-09-24 15:52:42 +02:00
Rocco Meli
582f0289af
Add mda-xdrlib and update pyedr and panedr ( #39912 )
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* ensure umpire~cuda~rocm when ~cuda~rocm
* Add mda-xdrlib and update pyedr and panedr
* Update var/spack/repos/builtin/packages/py-mda-xdrlib/package.py
Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
* code review
* fix python pin, conflated with py-tomli
---------
Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
2023-09-24 02:07:59 -06:00
eugeneswalker
95b737d923
trilinos +shylu: patch to resolve trilinos issue #12048 ( #40169 )
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* trilinos +shylu: patch to resolve trilinos issue #12048
* e4s ci: build xyce ^trilinos+shylu
---------
Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
2023-09-24 16:28:03 +09:00
Adam J. Stewart
d7e9a13f53
protobuf: add v4.24.3 ( #40152 )
2023-09-23 20:04:10 +02:00
Tom Payerle
25e45f9f07
py-tinyarray: add version 1.2.4, needed for python@3.10 ( #40171 )
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* py-tinyarray: add version 1.2.4, needed for python@3.10
Added @1.2.4
Require @1.2.4 when using python@3.10:
* py-tinyarray: format fix
2023-09-23 08:57:46 -05:00
Cameron Smith
38cc51ec36
pumi: add version 2.2.8 ( #40143 )
2023-09-22 14:38:46 -07:00
