* adding 2nd bunch of nf-core deps from update/nextflow-tools
* adding 3rd bunch of nf-core deps from update/nextflow-tools
* Update var/spack/repos/builtin/packages/py-dnspython/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-dnspython/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-dnspython/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-fastapi-utils/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-pastedeploy/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-pebble/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-fastapi/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-fastapi/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-gunicorn/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-starlette/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-starlette/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-starlette/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-parsley/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-paste/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-paste/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* py-gxformat2: added comment
* py-lagom: now using github tarballs
* fix for py-lagom
* adding missing deps to py-fastapi-utils
* another fix to py-lagom
* Update var/spack/repos/builtin/packages/py-dnspython/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-fastapi-utils/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-fastapi-utils/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-fastapi-utils/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-lagom/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-supervisor/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
This commit allows (remote) spec.json files to be clearsigned and gzipped.
The idea is to reduce the number of requests and number of bytes transferred
* added recipes for py-qutip and py-qutip-qip
* small fix
* updated qutip 2x versions
* py-qutip-qip: tarball url from github
* style fix in py-qutip-qip
* Update var/spack/repos/builtin/packages/py-qutip-qip/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-qutip-qip/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-qutip-qip/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-qutip/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-qutip/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* draft for py-pennylane recipe
* first draft for py-strawberryfields recipe
* minimal fix
* small fixes
* accounting for circular dep in py-pennylane and py-pennylane-lightning
* removing py-strawberryfields from this branch
* updated versions for py-pennylane 2x
* needs cmake
* py-pennylane-lightning using github tarball
* Update var/spack/repos/builtin/packages/py-autoray/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-pennylane-lightning/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
The Intel compiler isn't able to deal with noinline member functions of template classses defined in headers. As such it outputs
```
warning #2196: routine is both "inline" and "noinline"
```
cmake bootstrap will fail due to the word 'warning'.
See spack/var/spack/repos/builtin/packages/protobuf/intel-v2.patch for reference.
The issue does not appear with intel@2021.7.0 or later:
```
$~: compiler=/shared/spack/opt/spack/linux-amzn2-x86_64_v3/gcc-12.2.0/intel-oneapi-compilers-2022.2.0-uqvb2553zy5toeapvoopacndd27x6p5m/compiler/2022.2.0/linux/bin/intel64/icpc
$~: $compiler unique.c
icpc: remark #10441: The Intel(R) C++ Compiler Classic (ICC) is deprecated and will be removed from product release in the second half of 2023. The Intel(R) oneAPI DPC++/C++ Compiler (ICX) is the recommended compiler moving forward. Please transition to use this compiler. Use '-diag-disable=10441' to disable this message.
```
This is a clean version of https://github.com/spack/spack/pull/34167
Co-authored-by: Stephen Sachs <stesachs@amazon.com>
* package/libproxy: fix py3 install
* improve readability
* fix bug
* also add extend
* make flake happy
* [@spackbot] updating style on behalf of Sinan81
* Update var/spack/repos/builtin/packages/libproxy/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* python dependency implied by extends const.
* disable python variant by default
* add run_env, add py conflict
* Update var/spack/repos/builtin/packages/libproxy/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* set env for macos as well
* generalize lib dir detection
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
Co-authored-by: Sinan81 <Sinan81@users.noreply.github.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* add_new_package: py-file-magic
* re-order depends...
* Update var/spack/repos/builtin/packages/py-file-magic/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* [@spackbot] updating style on behalf of Sinan81
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Sinan81 <Sinan81@users.noreply.github.com>
* Add py-svgpath and dependency
* Update copyright expiration
* [@spackbot] updating style on behalf of heerener
* Process review remarks
* Update var/spack/repos/builtin/packages/py-trimesh/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Fix style issue
* py-trimesh: cleanup and optional dependencies
* Fix formatting issue
* py-trimesh: complete dependency list for easy variant
Two new packages: py-mapbox-earcut and py-pycollada
* Some more missing dependencies
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* new package: py-kb-python + dependencies
- py-loompy
- py-ngs-tools
- py-numpy-groupies
* Update var/spack/repos/builtin/packages/py-kb-python/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* py-shortuuid: add version 1.0.11
* Update var/spack/repos/builtin/packages/py-shortuuid/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update packages config to indicate that MSVC is the preferred compiler
* Update packages config to indicate that msmpi is the preferred MPI provider
* Fix msmpi external detection
