Commit graph

8612 commits

Author SHA1 Message Date
Adam J. Stewart
89a591eb3b Fix version-specific URLs for Python packages (#7394) 2018-03-05 12:00:49 -08:00
Veselin Dobrev
e4597f09be openmpi: add package-specific 'headers' property (#7267)
* [OpenMPI] Add the 'headers' property. This removes some redundant
headers from sub-directories, returned by the default '.headers'
handler.

* [OpenMPI] In the .headers property, add a fallback to search all of
prefix for the mpi.h header. Recommended by @junghans to support some
external configurations, see #7268.
2018-03-05 12:53:36 -07:00
Federico Ficarelli
3cf2cda4ec tclap: new package (#7390) 2018-03-05 14:53:42 +01:00
scheibelp
8b0552bc23 only filter compiler paths for binaries provided by the compiler (#7369) 2018-03-05 14:43:43 +01:00
Eric
ca336b60fa bracken: Create new package (#7375) 2018-03-05 14:16:27 +01:00
Mike Pozulp
90c8243113 add -ldl to silo ldflags when building with static hdf5 in order to fix #7384 (#7385) 2018-03-05 13:28:37 +01:00
Cyrus Harrison
d59ee8d07d update for conduit 0.3.1 release (#7344) 2018-03-05 11:04:21 +01:00
Eric Müller
1a77884c07 fix ruby build on gcc >= 7 (#7387)
* pkgconfig fixes a "libffi.a requires -fPIC" build error
* the patches solve the mentioned problem on GCC 7.x
2018-03-05 10:01:23 +01:00
Axel Huebl
189d9ec138 Rsync package: Fix Src Link (#7367)
Fix the source link to rsync downloads.

The old link only contained the latest release, the new link
contains all.
2018-03-01 22:42:26 -08:00
junkudo
6213463aeb new package: hiop (#7039) 2018-03-01 15:26:28 -08:00
Eric
86afd0e851 new package: perl-parallel-forkmanager (#7049) 2018-03-01 12:37:16 -08:00
healther
1ac0bce3e9 help gdb pick up python3 (#7104)
* Update gdb to autotools package
* Help gdb find python libraries for python 3
2018-02-28 23:13:06 -08:00
Omri Mor
b4b01b82ac mpich@develop: needs git submodules (#7357) 2018-02-28 19:48:57 -06:00
Eric
da2d6cccd6 new package: py-goatools (#7328) 2018-02-28 17:41:22 -08:00
Veselin Dobrev
d3ed46e958 [spack/spec.py] raise a query failure error if a property query returns None (#7277)
* [SPACK/spec.py] When a query through ForwardQueryToPackage returns
'None', treat that as query failure and raise RuntimeError with
suitable message. This overrides the current behavior to raise an
AttributeError which is now triggered only when no suitable query
property is found and there is no default handler.

* [spack/spec.py] Fix style.

* [SPACK/spec.py] In case of query failure, i.e. property returning
'None', raise AttributeError instead of RuntimeError in order to
pass the unit test. Also, small update in the logic distinguishing
query failure and lack of relevant property/attribute handling.
2018-02-28 15:25:29 -07:00
Denis Davydov
98949bd79b change recurse into recursive in a few places (#7342) 2018-02-28 20:15:26 +01:00
Christoph Junghans
3089207ced minighost: fix build on Ubuntu (#7354)
* minighost: fix build on Ubuntu

* minighost: append -lgfortran only for gcc
2018-02-28 09:37:01 -08:00
Christoph Junghans
6c2fe27f41
examinimd: fix a typo (#7352) 2018-02-28 10:02:33 -07:00
healther
f302d64235 add package verilator (#7332)
* add verilator package

* try to add environment variable and include folder

* manually install existing scripts and patch out spack's CXX wrapper

* added some comments

* make flake8 happy
2018-02-27 23:46:02 -08:00
Mario Melara
14e3eb78a7 Fix class name in build system tutorials (#7346)
AutoTools -> Autotools
2018-02-27 20:15:35 -08:00
Mark C. Miller
0e326c9687 updating zfp version (#7304) 2018-02-27 21:49:04 +01:00
Robert Pavel
5689fd304c Added initial Spackage for examinimd (#7350) 2018-02-27 11:42:35 -07:00
Christoph Junghans
2244e43e2b minighost package: fixed a typo (#7349) 2018-02-27 10:23:33 -08:00
Geoffrey Oxberry
ae1759eb16 aspcud@1.9.4: new package (#7094) 2018-02-27 13:16:40 +01:00
Axel Huebl
0c85aa09af MPark.Variant (#7251)
Adds Michael Park's C++11 `std::variant` (a C++17 stdlib feature).
2018-02-27 13:15:59 +01:00
Christoph Junghans
cba5457d62 minighost: fix mpi build (#7310) 2018-02-27 13:02:47 +01:00
Christoph Junghans
f04837b03e snbone: fix build gcc-4.8 (#7317) 2018-02-27 13:02:04 +01:00
Denis Davydov
03cf03e581 spglib: add new package (#7321) 2018-02-27 13:00:07 +01:00
Omar Padron
3a9cd2614e Docker-Based Developer Resource (#5871)
* add docker-based development resources

* incorporate feedback from @ax3l

* fix docs/improve ssh handling

* experiment with custom prompt

* add arch/fix missing core_compilers key

* add centos/minor tweaks

* make prompt experiment optional

* workaround problem with latest fedora docker image

* add docker documentation page to index toc

* try another documentation fix

* switch arch linux base to base/archlinux

* update the git urls in the Dockerfiles

* add opensuse

* switch CUSTOM_PROMPT variable to simply "PROMPT"
2018-02-27 00:36:14 -08:00
Axel Huebl
072e78dd52 cpu_features (#7302)
Adds Google's new cpu_features library.

Install was added recently, so don't take the `0.1.0` release but
the current `master` until a new version is published.
2018-02-26 20:47:22 +01:00
healther
3683ab87b5 llvm package: update python dependency (#7100)
llvm versions >= 5 can use python 3.x
2018-02-26 10:33:40 -08:00
Christoph Junghans
5b3e149f08
branson: needs mpi-2 (#7319) 2018-02-26 06:35:47 -07:00
Christoph Junghans
4b63ecd075
ebms: needs mpi-2 (#7320) 2018-02-26 06:35:34 -07:00
Christoph Junghans
dbcf243d37
hpgmg: more sane defaults for a proxy (#7330) 2018-02-26 06:35:17 -07:00
Mike Pozulp
8157f978b0 llvm and llvm-lld package updates (#7313)
* Combined llvm and llvm-lld: removed the separate llvm-lld package
  and added llvm-lld as an optional add on to the llvm package (the
  way several other llvm tools are maintained e.g. lldb)
* Added more lld hashes to llvm package
* The 'CppBackend' target doesn't exist for version 3.9.0 or later
  so exclude it for later versions
* Was incorrectly specifying 'sparc' as a target for the 'sparc'
  architecture - needed to specify 'Sparc'
* Fix issue #7248 building llvm: don't make the LLVMDemangle target
  for llvm < 4.0.0
2018-02-23 19:50:23 -08:00
Massimiliano Culpo
990f178341
accfft: added new package (#7213) 2018-02-23 23:29:12 +01:00
Massimiliano Culpo
9c7d4e34f7 Pin Sphinx version to v1.7.0 (#7337)
Later versions of Sphinx fail due to possible clashes with our custom
argparse.
2018-02-23 12:09:01 -08:00
scheibelp
4a807fca08
Make fix_darwin_install_name python3-compatible (#7329)
This updates the fix_darwin_install_name function to use the Spack
Executable object to run install_name_tool, which ensures that
process output is formatted as a 'str' for python2 and python3.
Originally fix_darwin_install_name was invoking subprocess.Popen
directly.
2018-02-23 10:24:59 -08:00
Nichols A. Romero
7db35ff05c QMCPACK - General Improvements (#6958)
* No longer need to patch CMake. Using CMAKE_CXX_FLAGS to include BLAS/LAPACK/MKL header files properly.

* Backport two patches to QMCPACK versions prior to 3.3.0:   https://github.com/QMCPACK/qmcpack/pull/621, https://github.com/QMCPACK/qmcpack/pull/623

* Insufficient to include lapack_dir in CMAKE_CXX_FLAGS, CMAKE_C_FLAGS is also needed.

* Make patched Espresso a default variant instead of a hard dependency. This is easier on computer architectures where Espresso is hard to build.

* Fix patching with QE variant. Now using correct form of patch command.

* Add QMCPACK v3.4.0

* Backport patch to QMCPACK versions prior to 3.3.0: https://github.com/QMCPACK/qmcpack/pull/643
2018-02-23 09:52:46 -08:00
healther
c2a4751237 fix url finding of lru-cache (#7118)
Change-Id: I65a93e3d5d1ea52a0be56bbc664c6b5d405e2bf4
2018-02-23 07:41:14 -06:00
Francesco Di Natale
0d0de09121 maestrowf: new package (#7300)
* Add Maestro Workflow Conductor to Spack

* Removal of a trailing whitespace character.
2018-02-22 16:01:18 -08:00
Jon Rood
d7b826a0aa nalu package: update dependency (#7245)
Yaml-cpp hasn't tagged a release in over 2 years, yet they have fixed
many things and now have the ability to use find_package in CMake.
Since we use this feature in Nalu, we require the latest yaml-cpp
until they tag a new release. I have also deprecated the now
unnecessary ENABLE_INSTALL flag.
2018-02-22 14:14:39 -08:00
Christoph Junghans
c4fcc245e2 remove dead Exact proxies (no fetch possible) (#7312) 2018-02-22 10:27:27 -08:00
Brian Van Essen
2dd93ed5fa ECP-CANDLE benchmark script (#7271)
* Added a package for the MDAnalysis toolkit.

* Added a variant to the candle benchmark to make MPI support optional.

* Added py-requests package.
2018-02-22 09:54:46 -08:00
Brian Van Essen
8bd7712da3 Added virtualenvwrapper python package (#7270)
* Added a package for the MDAnalysis toolkit.

* Adding a package for the Python virtualenvwrapper pacakge.  Included
dependent virtualenv-clone and stevedore packages. Updated py-pbr with
a new version to support this.

* Added extra necessary dependencies and fixed the file download paths.
2018-02-22 09:47:05 -08:00
Brian Van Essen
22d9a7e0ea Fixed Theano GPU support (#7325)
* Added a package for the MDAnalysis toolkit.

* Added a new package for pygpu, which is the python front end of the
libgpuarray.  Additionally changed the dependency for theano so that
it properly picks up the pygpu library.

* Added the libcheck package.  Fixed flake8 errors in py-pygpu recipe
and removed spurious dependency on cudnn for libgpuarray.
2018-02-22 09:45:37 -08:00
Christoph Junghans
1401d8a308
bml: enable MPI by default (#7324) 2018-02-22 09:04:49 -07:00
Christoph Junghans
c62f1d4722
bml: add version 1.2.3 (#7308) 2018-02-22 06:08:54 -07:00
Massimiliano Culpo
72c270419f
yambo: added new package (#7301) 2018-02-22 12:11:51 +01:00
Christoph Junghans
dba0c9ab6b
cohmm: use more sane defaults (#7296) 2018-02-21 15:03:53 -07:00