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2225 commits 3 branches 52 tags 188 MiB
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1128 commits

Author SHA1 Message Date
Elizabeth Fischer
abee9c83b4 Removed googletest FIXME... 2016-03-29 17:26:34 -04:00
Todd Gamblin
a06f682e49 Merge pull request #671 from citibeth/efischer/160327-RemoveRedundantLibXML2 
Removed redundant package py-libxml2.  Use libxml2 instead.
 2016-03-29 12:38:07 -07:00
Denis Davydov
ad402ff85b astyle@2.04: add new package 2016-03-29 18:43:44 +02:00
Todd Gamblin
e0fdb34104 Merge branch 'eschnett-eschnett/boost-mpi-osx' into develop 2016-03-29 05:15:40 -07:00
Todd Gamblin
62ae830e49 Merge branch 'eschnett/boost-mpi-osx' of git://github.com/eschnett/spack into eschnett-eschnett/boost-mpi-osx 2016-03-29 05:14:41 -07:00
Todd Gamblin
b3a384e1d8 Merge pull request #680 from davydden/hypre_muparser_fixes 
minor fixes to hypre and muparser on Linux
 2016-03-29 05:11:50 -07:00
Todd Gamblin
275943d8df Merge branch 'eschnett-eschnett/gcc-osx-2' into develop 2016-03-29 04:16:53 -07:00
Patrick Gartung
ccc1b23bea this allows gcc4.9.3 to build on OSX10 2016-03-29 04:15:07 -07:00
Denis Davydov
63c3feb79e minor fixes to hypre and muparser on Linux 2016-03-29 10:05:08 +02:00
Todd Gamblin
7e7461e8fb Merge pull request #626 from davydden/mumps_shared_tests 
add shared variant to mumps (needed for Trilinos) plus tests
 2016-03-29 00:33:30 -07:00
Denis Davydov
7753d823cb add a comment on static mumps 2016-03-29 09:27:55 +02:00
Denis Davydov
f9bcce6a68 turn off python by default 2016-03-29 09:19:24 +02:00
Kelly (KT) Thompson
197f07306b Merge remote-tracking branch 'upstream/develop' into pkg-subversion 2016-03-28 19:56:07 -06:00
Kelly (KT) Thompson
40cea0110f Merge remote-tracking branch 'upstream/develop' into pkg-graphviz 2016-03-28 19:53:22 -06:00
Todd Gamblin
02879d94ff Merge pull request #673 from davydden/netcdf_cxx 
new package: netcdf-cxx
 2016-03-28 18:03:36 -07:00
Denis Davydov
09e77812b6 fix installation of superlu_dist headers and add it as a dependency to petsc; add a variant to hypre to disable internal superlu 2016-03-29 00:21:32 +02:00
Denis Davydov
4e87cf9d74 fix extra comma 2016-03-28 18:00:34 +02:00
Denis Davydov
207215980b make hypre and hdf5 be ON/OFF 2016-03-28 17:54:27 +02:00
Denis Davydov
dd60cc326c adopt modifed superlu and hypre 2016-03-28 17:52:22 +02:00
Denis Davydov
5eefca43e7 petsc: extend variants by mumps, complex and debug 2016-03-28 14:35:01 +02:00
Denis Davydov
0da545ecac tell amesos that we use mumps 5 2016-03-28 13:16:08 +02:00
Denis Davydov
e00cab75bd more elaborated tests/direct solvers 2016-03-28 12:12:55 +02:00
Denis Davydov
97cdd79478 fix netcdf 2016-03-28 10:49:20 +02:00
Denis Davydov
9c894f5935 new package: netcdf-cxx 2016-03-28 10:19:25 +02:00
Todd Gamblin
8b45d6f84f Merge pull request #658 from davydden/metis_parmetis_darwin 
metis/parmetis/oce/boost: correct install_name on Darwin via a global tool
 2016-03-27 16:10:05 -07:00
Elizabeth F
3bd550d6a2 GEOS Python extension did not compile with Python3. 2016-03-27 18:28:51 -04:00
Denis Davydov
7eca1284c8 metis/parmetis/boost/oce/scalapack: correct install_name on Darwin via a global function. 2016-03-28 00:22:25 +02:00
citibeth
ccd155572f Removed redundant package py-libxml2. Use libxml2 instead. 2016-03-27 18:18:54 -04:00
Denis Davydov
fc73e93b50 rework netcdf 2016-03-27 23:47:43 +02:00
Todd Gamblin
9061800b30 Merge branch 'eschnett/gcc-osx-2' of git://github.com/eschnett/spack into eschnett-eschnett/gcc-osx-2 2016-03-27 13:18:23 -07:00
Denis Davydov
20600b8cac add tests and netcdf-cxx4 2016-03-27 21:03:18 +02:00
Denis Davydov
439d3b3ddb mumps: add install_name / soname 2016-03-27 17:38:25 +02:00
citibeth
cc42391e0f Added py-netcdf 2016-03-27 11:06:10 -04:00
Denis Davydov
69ebc8173e use global tool to fix install_name 2016-03-27 16:04:13 +02:00
Denis Davydov
9cff241ad5 fix install name on Darwin 2016-03-27 10:39:09 +02:00
Denis Davydov
a82a587b32 lower requirement on mumps 2016-03-27 06:17:43 +02:00
citibeth
9b130e1d19 Added googletest package. 2016-03-26 20:42:35 -04:00
Elizabeth F
11ca06b104 Added new py-cython version 2016-03-26 20:37:02 -04:00
Denis Davydov
9c391bbda1 minor changes to variants 2016-03-26 20:52:08 +01:00
Denis Davydov
965ce633c3 cleanup variants 2016-03-26 18:51:59 +01:00
Denis Davydov
f603c82e81 qualify Amesos link errors 2016-03-26 18:43:55 +01:00
Elizabeth F
497adc3b42 Added new version; old versions don't work with Python3. 2016-03-25 22:47:37 -04:00
Denis Davydov
c7011d21aa update dependencies. Builds fine on OSX 2016-03-25 22:15:39 +01:00
Todd Gamblin
42ec822379 Merge pull request #633 from davydden/netcdf_curl 
make netcdf link against Spack's curl
 2016-03-25 12:54:53 -07:00
Todd Gamblin
8b2e79bcfa Merge pull request #485 from epfl-scitas/packages/blas_lapack_providers 
reworking package : netlib
 2016-03-25 12:53:46 -07:00
Denis Davydov
6699399e51 add when to depends_on scalapack 2016-03-25 17:00:42 +01:00
Denis Davydov
eec50b524b minor cleanup 2016-03-25 16:58:14 +01:00
Denis Davydov
5172f09b9f builds on OSX again (modulo CC wrappers are solved) 2016-03-25 16:47:48 +01:00
Denis Davydov
26a72619ae add missing sys 2016-03-25 12:42:26 +01:00
Denis Davydov
21e81e92a9 try to disable VerifyFortranC tests on Darwin 2016-03-25 12:05:48 +01:00
Denis Davydov
828aeefb1d minor cleanup 2016-03-25 12:01:00 +01:00
Denis Davydov
7f2db8c267 fix w GCC 4.8 on Ubuntu but broke w GCC 5.3/Clang on OSX 2016-03-25 11:56:41 +01:00
Denis Davydov
d096b155f4 fix filter_file 2016-03-25 11:56:40 +01:00
Denis Davydov
c33a63cabc fix python installation 2016-03-25 11:56:40 +01:00
Denis Davydov
416fcd0810 same 2016-03-25 11:56:40 +01:00
Denis Davydov
0fc9326a4c add variants 2016-03-25 11:56:40 +01:00
Denis Davydov
df995c4ef8 minor cleanup 2016-03-25 11:56:40 +01:00
Denis Davydov
8c9f887613 finally builds 2016-03-25 11:56:40 +01:00
Denis Davydov
3f12a51759 keep fiddling 2016-03-25 11:56:40 +01:00
Denis Davydov
e51fe2934e fiddle more 2016-03-25 11:56:40 +01:00
Denis Davydov
fade526ae4 remove tbb 2016-03-25 11:56:40 +01:00
Denis Davydov
7897f10126 fiddle with fortran 2016-03-25 11:56:40 +01:00
Denis Davydov
eb5b0767aa remove gfortran as we have libnotfound... 2016-03-25 11:56:40 +01:00
Denis Davydov
2fb599ea86 minor 2016-03-25 11:56:39 +01:00
Denis Davydov
50e4b609c6 minor 2016-03-25 11:56:39 +01:00
Denis Davydov
7e4e2c988a minor 2016-03-25 11:56:39 +01:00
Denis Davydov
88a7a23132 even more 2016-03-25 11:56:39 +01:00
Denis Davydov
2162627f35 more 2016-03-25 11:56:39 +01:00
Denis Davydov
bc3314a57d more and more 2016-03-25 11:56:39 +01:00
Denis Davydov
45b4895888 patch 2016-03-25 11:56:39 +01:00
Denis Davydov
b6a35716ce same 2016-03-25 11:56:39 +01:00
Denis Davydov
b91a155e8d more specific about dependencies 2016-03-25 11:56:39 +01:00
Denis Davydov
18db930866 rearrange 2016-03-25 11:56:39 +01:00
Denis Davydov
76006fc346 fix typo 2016-03-25 11:56:38 +01:00
Denis Davydov
30ba96e58f same 2016-03-25 11:56:38 +01:00
Denis Davydov
83fea631f1 extend trilinos 2016-03-25 11:56:38 +01:00
Massimiliano Culpo
f15249afe5 Merge branch 'develop' of https://github.com/LLNL/spack into packages/blas_lapack_providers 
Conflicts:
	var/spack/repos/builtin/packages/py-numpy/package.py
 2016-03-25 11:05:05 +01:00
Denis Davydov
3e39daeb12 add fPIC to MUMPS when building shared libs 2016-03-25 09:56:24 +01:00
Denis Davydov
fd67da607e make netcdf link against Spack's curl 2016-03-25 09:32:48 +01:00
Josh Sixsmith
540e57f026 Upload of GDAL, kealib, openjpeg, py-tuiview package builds. 2016-03-25 18:27:02 +11:00
Denis Davydov
fdd7e91ba0 add shared variant to mumps (needed for Trilinos) plus tests 2016-03-25 06:56:46 +01:00
Denis Davydov
03c8a91f6a parmetis: avoid hardcoding -lm; use same approach as in METIS 2016-03-24 22:33:10 +01:00
Denis Davydov
0d4d201b70 patch parmetis to use external GKlib 2016-03-24 21:24:03 +01:00
Denis Davydov
7fb463abb9 install GKlib headers along with METIS 2016-03-24 21:24:03 +01:00
Todd Gamblin
38ea75e8ca Merge pull request #490 from epfl-scitas/packages/atlas 
atlas : provides both 'blas' and 'lapack'
 2016-03-24 11:24:04 -07:00
Todd Gamblin
823edd0bb2 Merge pull request #627 from adamjstewart/features/numpy-scipy 
Simplify NumPy dependencies
 2016-03-24 11:05:09 -07:00
Alfredo Gimenez
254f65f299 Remove incorrect sanity check for libelf 2016-03-24 10:48:38 -07:00
Adam J. Stewart
8643e21913 Simplified NumPy dependencies 2016-03-24 12:34:58 -05:00
alalazo
758a9c9096 python extensions : create PYTHONPATH in module files 2016-03-24 10:57:46 +01:00
Todd Gamblin
7cf1b7ed51 Merge pull request #613 from davydden/superlu_dist_fix_lib 
fix superlu-dist lib installation
 2016-03-24 02:54:43 -07:00
Todd Gamblin
1306cdd998 Merge pull request #618 from epfl-scitas/fixes/espresso_no_module 
fix : no module file gets generated by espresso
 2016-03-24 02:53:56 -07:00
Todd Gamblin
4be8472f61 Merge pull request #612 from davydden/mumps_osx 
fix MUMPS build on OSX (set parallel=False)
 2016-03-24 02:53:29 -07:00
Todd Gamblin
e1848c1d28 Merge pull request #624 from davydden/parmetis_gnu 
fix parmetis on Ubuntu with GNU compilers by linking to lm
 2016-03-24 02:44:40 -07:00
Todd Gamblin
c83d22b5fc Merge pull request #587 from cyrush/cmake_pkg_openssl_as_variant 
cmake package: add variant for openssl support
 2016-03-24 02:42:39 -07:00
Denis Davydov
9b8b17b6f1 fix parmetis on Ubuntu with GNU compilers by linking to lm 2016-03-24 10:36:02 +01:00
Denis Davydov
4e5dfc8b18 fix missing (depricated) _dggsvd_ and _sggsvd_ in Openblas 0.2.16 2016-03-23 22:09:39 +01:00
alalazo
acaa589bdd Merge branch 'develop' of https://github.com/LLNL/spack into packages/blas_lapack_providers 
Conflicts:
	var/spack/repos/builtin/packages/netlib-lapack/package.py
 2016-03-23 17:25:00 +01:00
alalazo
34a8f0c96b espresso : fixes #454 2016-03-23 17:01:52 +01:00
Todd Gamblin
cc582dd4b4 Add mock python package. 2016-03-23 02:03:27 -07:00
Todd Gamblin
091fcc3aa9 Merge pull request #599 from davydden/slepc 
add Slepc package
 2016-03-23 01:53:32 -07:00