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Author SHA1 Message Date
Todd Gamblin
0f3b80cddb Fix for SPACK-11: Spack compiler wrapper is now in bash. 
- Startup is much faster
- Added test for compiler wrapper parsing.
- Removed old compilation module that had to be imported by old cc.
- Removed cc from python version checks now that it's bash.
 2014-11-03 14:12:16 -08:00
Todd Gamblin
1656f62a12 Add bzip2 package and spack pkg add command. 2014-11-03 14:12:16 -08:00
Todd Gamblin
8f9de17869 "spack info -r" is now "spack package-list" 
- too much going on in this command, and it made subcommand parsing weird.
- information printed is the same but info and package-list are really different commands.
 2014-11-01 16:03:09 -07:00
Todd Gamblin
a5859b0b05 Add ability to get subparser by name from argparse 2014-11-01 15:59:29 -07:00
Todd Gamblin
3db22a4e33 Sane self.url for packages (reflects current version) 2014-11-01 15:01:01 -07:00
Todd Gamblin
85a14b68b7 spack compiler add checks for access before listing directories. 2014-10-31 10:30:58 -07:00
Todd Gamblin
f60fd330cb Better error messages for extension() 2014-10-30 15:00:02 -07:00
Todd Gamblin
ee528bc426 Docs for spack list with glob. 2014-10-27 22:40:04 -07:00
Todd Gamblin
75e6e794fb Fix bug with extension() for sourceforge URLs. 2014-10-27 21:32:31 -07:00
Todd Gamblin
d542b7b003 Merge branch 'features/new-docs' into develop 2014-10-27 20:44:00 -07:00
Todd Gamblin
1c4948e1b0 Fix long-standing multimethod test error. 
- New inclusive version ranges from git-fetching branch enable a fix.
- Can now write :1 to include 1.3, 1.4, etc.
  - couldn't do this before so provides() was weird.
 2014-10-27 20:02:24 -07:00
Todd Gamblin
d98beeec31 Remove ambiguous test case in url_extrapolate. 2014-10-27 19:59:19 -07:00
Todd Gamblin
4d8a47800a Add docs on spack module refresh. 2014-10-27 19:53:56 -07:00
Todd Gamblin
4ecc7e1c93 Document file filtering functions. 2014-10-27 19:53:55 -07:00
Todd Gamblin
4bf6930416 Docs for modules & dotkits. 2014-10-27 19:53:55 -07:00
Todd Gamblin
e2af2a27bf Merge branch 'features/git-fetching' into develop 
Conflicts:
	lib/spack/docs/packaging_guide.rst
	lib/spack/spack/cmd/info.py
	lib/spack/spack/package.py
	lib/spack/spack/stage.py
 2014-10-27 19:53:05 -07:00
Todd Gamblin
d41d6ed863 Updated packaging docs. 2014-10-27 00:55:38 -07:00
Todd Gamblin
525344aa85 Make info command show VCS URLs properly. 2014-10-27 00:55:25 -07:00
Todd Gamblin
2e2e720a2a Add spack md5 command for simple checksumming. 2014-10-25 14:40:17 -07:00
Todd Gamblin
fa4d58db52 Add a dummy depends_on to the boilerplate. 2014-10-25 14:38:42 -07:00
Todd Gamblin
94a52a8710 Start documenting new features. 2014-10-23 20:15:11 -07:00
Todd Gamblin
87b87199f2 Fix for SPACK-43: compiler finding fails gracefully on unknown error. 2014-10-22 01:08:08 -07:00
Todd Gamblin
e4c2891d4b Test for URL extrapolation. 2014-10-22 00:49:16 -07:00
Todd Gamblin
0c4b8d45df Consolidate archive_file() implementation into Stage. 2014-10-16 08:50:57 -07:00
Todd Gamblin
fb3003f664 Bug fixes for URLs and mirror fetching. 2014-10-16 06:56:00 -07:00
Todd Gamblin
6fdfd83e6b Add test cases for mirroring. 2014-10-15 21:07:41 -04:00
Todd Gamblin
8e3c2d8a26 Refactor fetch tests to use common mock repo module. 2014-10-15 07:40:01 -07:00
Todd Gamblin
fbd7e96680 Add a mirror module that handles new fetch strategies. 
- Uses new fetchers to get source
- Add archive() method to fetch strategies to support this.
- Updated mirror command to use new mirror module
 2014-10-14 23:26:43 -07:00
Todd Gamblin
8fd4d32408 Use external argparse in spack list, for 2.6 compatibility. 2014-10-10 09:45:48 -07:00
Todd Gamblin
dd2cea4107 Add available versions to generated package list documentation. 2014-10-08 14:08:11 -07:00
Todd Gamblin
36a87f5bf9 Update documentation to add an auto-generated list of packages. 2014-10-08 03:08:40 -07:00
Todd Gamblin
319b37af0e Add spack edit -c option to edit commands. 2014-10-08 03:08:40 -07:00
Todd Gamblin
ff546358f3 Update docs to use new version format. 2014-10-08 03:08:40 -07:00
Todd Gamblin
ee23cc2527 Add archive creation capability to fetch strategies. 
- fetch strategy needs to know how to create archive of fetched repo
- allows mirrors to be created from git/other VCS fetches.
 2014-10-07 23:26:39 -07:00
Todd Gamblin
e8d131ef96 Minor bugfix in exception constructor. 2014-10-07 23:23:18 -07:00
Todd Gamblin
1801a85966 Move tty output commands out of package and into clean command. 2014-10-07 23:22:58 -07:00
Todd Gamblin
4bde771970 Fix for SPACK-39: Concretization was too restrictive. 
- concretize_version() now Use satisfies(), not intersection.
- version class updated with better intersection/union commands
- version now 1.6 "contains" 1.6.5
- added test for new version functionality

- remove none_high and none_low classes
  - version module is now self-contained; save for external 2.7
    functools.total_ordering for 2.6 compatibility.
 2014-10-07 23:22:45 -07:00
Todd Gamblin
1c60b3967d Add simple fnmatch filtering to spack list. 2014-10-06 14:11:19 -07:00
Todd Gamblin
37e96ff6e1 Added test for Mercurial fetching. 2014-10-04 18:38:47 -07:00
Todd Gamblin
0fa1c5b0a5 Add Mercurial fetch strategy and lwm2. 2014-10-03 16:57:32 -07:00
Todd Gamblin
727d313c30 Fix location.py to use source_path 2014-10-03 16:57:32 -07:00
Todd Gamblin
faae720c36 add tests for svn fetching. 2014-10-03 16:55:53 -07:00
Todd Gamblin
da84764e97 Add test case for git fetching. 2014-10-03 16:55:53 -07:00
Todd Gamblin
c74cd63389 Callpath build works when a tag is fetched from git. 2014-10-03 16:55:53 -07:00
Todd Gamblin
0cc79e0564 Implement per-version attributes for flexible fetch policies. 
- Tests pass with URL fetching and new scheme.
- Lots of refactoring
- Infrastructure is there for arbitrary fetch policies and more attribtues on the version() call.
- Mirrors do not currently work properly, and they get in the way of a proper git fetch
 2014-10-03 16:55:13 -07:00
Todd Gamblin
52d140c337 Factor out URL fetching into URLFetchStrategy 
- Added FetchStrategy class to Spack
- Isolated pieces that need to be separate from Stage for git/svn/http
- Added URLFetchStrategy for curl-based fetching.
 2014-10-03 16:53:13 -07:00
Todd Gamblin
720ced4c2e Add test for URL version substitution. 2014-09-30 00:09:11 -07:00
Todd Gamblin
13eca0357f Bugfix for version substitution. 2014-09-29 23:30:48 -07:00
Todd Gamblin
921a5b5bcc Make fetch fail on 404. 2014-09-29 23:28:16 -07:00
Todd Gamblin
26495ddce9 Reverse sort output versions in spack checksum 2014-09-29 23:27:40 -07:00
Todd Gamblin
e4613a60cf Fix for spack cd -i. 2014-09-29 22:43:40 -07:00
Todd Gamblin
a8ed1ec414 Minor argparse improvement. 2014-09-29 20:00:00 -07:00
Todd Gamblin
3bd52678be MPICH sets MPI compilers to use real compilers and not spack wrappers. 2014-09-27 21:36:42 -07:00
Todd Gamblin
5cc508393a gfortran version detection brokenon debian. 2014-09-27 16:19:56 -07:00
Todd Gamblin
d7984c7540 Update checksum to print new version syntax. 2014-09-27 15:33:27 -07:00
Todd Gamblin
608191bd8c Find custom list_urls depending on the archive URL (e.g. github releases) 2014-09-27 15:32:44 -07:00
Todd Gamblin
2de2d4bea7 Modify MPI installs to work without fortran. 2014-09-23 14:59:30 -07:00
Todd Gamblin
7380de8ee3 Change git URL to https URL in all docs. 2014-09-19 09:55:13 -07:00
Todd Gamblin
39acca4b43 Fix for bug in create introduced by LLVM merge. 2014-09-19 09:42:07 -07:00
Todd Gamblin
fa5594e13f Merge branch 'features/llvm' into develop 
- merging parts of LLVM that can be built now.
- need to wait for standalone builds for some of the others.
 2014-09-18 23:30:32 -07:00
Todd Gamblin
9165a000a3 Better C++11 support, remove non-standalone llvm-compiler-rt. 
- LLVM non-standalone add-ons are difficult to build outside LLVM.
- May have to wait for future versions of LLVM to build some of these
 2014-09-18 23:22:03 -07:00
Todd Gamblin
4a19fa793e Support for pkg-config. 2014-09-18 01:42:01 -07:00
Todd Gamblin
68274ee657 Add command to show packages added in particular git revisions. 
spack pkg list    [rev]           list packages for revision.
spack pkg diff    [rev1] [rev2]   diff bt/w packages in rev1 and rev2
spack pkg added   [rev1] [rev2]   pkgs added since rev1
spack pkg removed [rev1] [rev2]   pkgs removed since rev2
 2014-09-17 15:48:13 -07:00
Todd Gamblin
881fdb66ae Merge branch 'develop' into features/fileutils 
Conflicts:
	lib/spack/spack/packages.py
 2014-09-16 23:53:44 -07:00
Todd Gamblin
a4c8e945c7 Some fixups for Adam's callpath and adept-utils packages. 
- Make spack packages RPATH *ALL* dependencies (i.e. the whole tree)
- prevents callpath link from finding wrong libelf -- always uses the one dyninst used.
 2014-09-16 21:59:46 -07:00
David Beckingsale
42ca6c8bfc Add dependency prefixes to CMAKE_PREFIX_PATH 2014-08-22 14:45:44 -07:00
Todd Gamblin
d87a652582 Add spack cd and spack location commands. 
- Better shell support for cd'ing into directories
- Fix some csh weirdness with nested aliases.
 2014-08-22 11:00:19 -07:00
Todd Gamblin
eb5efed421 Merge branch 'features/postgresql' into develop 
- add spack cd command.
- Fix bug in modules hook

Conflicts:
	lib/spack/spack/cmd/stage.py
	lib/spack/spack/hooks/dotkit.py
	share/spack/setup-env.bash
 2014-08-21 22:59:39 -07:00
Todd Gamblin
5a9ef130ea Make EnvModule class use spec instead of package, fix using module of non-present package. 
- Using the spec doesn't require the package to be there.
- Restore ability to use non-present packages (which was broken)
 2014-08-20 11:43:03 -07:00
Todd Gamblin
8cc2298181 Merge branch 'features/python-2.6-compatibility' into develop 
- Changed 'import argparse' to 'from external import argparse' in conflicts.

Conflicts:
	lib/spack/spack/cmd/dotkit.py
	lib/spack/spack/cmd/unuse.py
	lib/spack/spack/cmd/use.py
 2014-08-20 09:30:40 -07:00
George Todd Gamblin
42e27d04c1 Merge pull request #19 in SCALE/spack from features/modules to develop 
# By Todd Gamblin (4) and David Beckingsale (2)
# Via Todd Gamblin
* commit 'b601fd08caf21b5fc11e6998a5ebd20a04ac57ad':
  Bugfixes for csh environment modules.
  Bugfixes, more consolidation of modules code.
  Add csh/tcsh support for modules
  Consolidate most module code into spack.modules and spack.cmd.module
  Fixed up module support
  Added inital module support
 2014-08-18 23:11:02 -07:00
Todd Gamblin
b601fd08ca Bugfixes for csh environment modules. 2014-08-17 01:41:32 -07:00
Todd Gamblin
22bec329c1 Bugfixes, more consolidation of modules code. 
- specific module classes use __metaclass__ to register themselves.
- bugfixes in module writing.
 2014-08-16 22:22:53 -07:00
Todd Gamblin
776560f8ce Add csh/tcsh support for modules 
- csh scripting is a GIANT pain in the ass
- hopefully the thin script layer doesn't get much more complex.
 2014-08-16 14:58:15 -07:00
Todd Gamblin
221cf6acb9 Consolidate most module code into spack.modules and spack.cmd.module 
- One file with all the module classes (spack/modules.py)
  - Has an EnvModule superclass that does most of the work and consolidates common code
  - Subclasses have specializations for different module systems (TclModule, Dotkit)

- One command (spack module) for all the types of modules to use
  - the one command is used by the scripts, only need to maintain in one place
  - has some subcommands for different module types, but they're handled mostly generically.

- Consolidate zsh support into a single setup-env.sh script.
 2014-08-16 14:53:57 -07:00
Todd Gamblin
5a3803de39 Add options to stage to make it just print out stage dir. 2014-08-11 22:47:23 -07:00
Todd Gamblin
0bba101ff9 Allow packages to add a dotkit() method and write custom parts of dotkits. 2014-08-11 22:47:22 -07:00
Todd Gamblin
113afe860e More robust symbol inclusion for 'from spack import *' 
- avoid errors where some symbols aren't exported to packages.
- reduce the number of places each symbol needs to be mentioned in
  an __all__ list
 2014-08-11 22:47:22 -07:00
Todd Gamblin
48d5281e3a Test cases pass; Spack supports Python 2.6! 2014-08-10 18:07:20 -07:00
Todd Gamblin
7082b0a59a cc supports Python 2.6 2014-08-10 18:07:20 -07:00
Todd Gamblin
696e80c62f Get rid of Python 2.7 dict.viewkeys() call. 2014-08-10 18:05:52 -07:00
Todd Gamblin
d95e7ecfe1 Remove dependency on Python2.7 OrderedDict, revise config parser 2014-08-10 17:56:36 -07:00
Todd Gamblin
d86a638099 Add Python 2.7 functools.total_ordering to external modules. 
- removing dependence on 2.7
- added it to pyqver2 ads well
 2014-08-10 17:54:39 -07:00
Todd Gamblin
ca328a6993 Fix minor warning about Exception.message being deprecated. 2014-08-10 17:52:46 -07:00
Todd Gamblin
a41a19d14d Change dict comprehensions to dict() constructors. 2014-08-10 16:04:41 -07:00
Todd Gamblin
5a5da817a1 Fix SPACK-27 & remove dependence on check_output 
- subprocess.check_output is python 2.7 only
- Spack checks for existence of requested prefix, creates it if it does not exist.
 2014-08-10 11:52:17 -07:00
Todd Gamblin
7714d08e2e Remvoe dependence on v2.7 argparse by including argparse. 2014-08-10 11:48:07 -07:00
Todd Gamblin
17895bd6fd Add a test case to ensure that Spack is v2.6 compliant. 2014-08-10 11:46:14 -07:00
Todd Gamblin
8ab793a3a6 Add external package with pyqver2 tool 2014-08-10 11:45:32 -07:00
Todd Gamblin
98797459f3 Minor tweaks after spec update. 
- spack find -p works properly (get path from spec, not package)

- directory layout and PackageDB normalize things automatically unless
  they're unknown packages (need to do this for spack find -l)

- install test made robust to mock/main package conflicts
 2014-08-09 17:41:56 -07:00
Todd Gamblin
5f073ae220 More spec improvements 
- Spec.copy() does not create superfluous nodes and preserves DAG
  connections.

- Spec.normalize() doesn't create extra dependency nodes or throw out
  old ones like before.

- Added better test cases for above changes.

Minor things:
- Fixed bug waiting to happen in PackageDB.get()
  - instances was keyed by name, not by spec, so caching wasn't really
    working at all.
- removed unused PackageDB.compute_dependents function.
- Fixed PackageDB.graph_dependencies() so that spack graph works again.
 2014-08-09 16:17:40 -07:00
Todd Gamblin
63f8af8078 Add postorder traversal to specs 
- Spec.preorder_traversal() is now Spec.traverse().
- Caller can supply order='pre' or order='post'
 2014-08-08 13:21:52 -07:00
Todd Gamblin
d5c625d87d Clean up specs, spec comparison, and spec hashing. 
- Spec comparison is now less strict
  - compares based on sorted list of dependencies but not
    their structure
  - Makes comparison easy when a spec is not normalized.

- This makes the dep_hash consistent for specs read in from a
  directory layout.  - Can now reliably read in a spec for which the
  package has gone away, and still be able to delete its install.
  - easy switching between git branches

- Fixed latent bug in Spec.flat_dependencies() (was including root)

- added a test for the directory layout so that this code will get
  more exercise.
 2014-08-08 13:21:48 -07:00
Todd Gamblin
c55041e9d4 Partial commit of more packages. 2014-08-04 07:54:22 -07:00
Todd Gamblin
cabfc374eb More descriptive error when package constructor fails. 
- helps package_sanity test identify which package failed.
- encountered while upgrading versions in Adam's packages to the new format.
 2014-08-04 07:54:05 -07:00
Adam Moody
a32816c644 cannot uninstall dtcmp because depends on dtcmp 2014-08-04 07:54:04 -07:00
David Beckingsale
57ddbd282a Fixed up module support 2014-08-04 07:53:40 -07:00
David Beckingsale
94c5c9667c Added inital module support 2014-08-04 07:53:40 -07:00
George Todd Gamblin
d13d32040c Merge pull request #20 in SCALE/spack from openss to develop 
# By Matthew LeGendre (2) and Todd Gamblin (1)
# Via Todd Gamblin
* commit 'd7a3c7e555bfd93fbf93ec55608d7fc6aa8052f8':
  Fix up Matt's openss packages.
  Add sqlite to spack
  Add libmonitor to spack.  Still needs svn support for checkout
 2014-08-04 07:51:12 -07:00
Todd Gamblin
d0b179962b find and uninstall work when installed package is no longer in spack. 
- Make switching between git branches easier.
- Make future removal of packages easier.
 2014-08-04 07:40:53 -07:00