Bryan Herman
f213cf8349
py-h5py: offline installation and deps fix ( #22262 )
...
* added h5py patch file for offline installs to work
* h5py v3+ deps consistent with setup.py, add patch
2021-03-12 19:44:37 +00:00
Chuck Atkins
474e616a5b
ascent: Relax CMake version constraints ( #22253 )
2021-03-12 11:37:43 -08:00
Valentin Volkl
cf29ee6b2b
[dd4hep] update env var ( #22218 )
2021-03-12 11:10:07 -07:00
iarspider
b2ece3abba
Rivet: syntax fixes ( #22225 )
2021-03-12 09:52:07 -08:00
Desmond Orton
24b7aff837
Version update to 1.9.4 ( #22231 )
2021-03-12 09:44:10 -08:00
Brian Van Essen
8a8fad8474
LBANN software stack: new versions and dependencies ( #22234 )
...
Updated the versions for DiHydrogen and Aluminum. Added new constraints on versions of Aluminum that are used across the software stack. Cleaned up the dependency on DiHydrogen for LBANN.
2021-03-12 10:43:13 -07:00
Sinan
650f24f4d3
add hints for dependency resolution ( #22238 )
...
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2021-03-12 09:36:11 -08:00
a-saitoh-fj
5790ec5359
py-fsspec: Update version to install py-s3fs ( #22259 )
2021-03-12 11:31:00 -06:00
Bryan Herman
a2e9a9076f
fixed when python dep in ftfy dep for py benedict ( #22261 )
2021-03-12 10:28:13 -07:00
Tomoyasu Nojiri
19b163e49d
chai: Add 2.3.0 version ( #22254 )
2021-03-12 10:16:06 -07:00
a-saitoh-fj
c6440eb23c
py-chainer: Add test method for ChainerMN (continued #21848 , #21940 ) ( #22189 )
...
* py-chainer: Add test method for ChainerMN (continued #21848 , #21940 )
* py-chainer: Fixed the word in the message
* py-chainer: Delete unnecessary imports
* py-chainer: Incorporation of the measures pointed out in #21940 was insufficient.
2021-03-12 11:40:25 +00:00
kuramoto-fj
40147d9955
mptensor: Add test method ( #21712 )
...
* mptensor: Add test method
* mptensor: Reverted the receipe on merged style
* mptensor: Changed """ to #
2021-03-12 06:13:38 +00:00
Sergei Shudler
21b2d7109a
superlu-dist: Add e4s testsuite-inspired smoke test ( #22237 )
...
* Added a smoke test for superlu-dist recipe
* Fixed small issues following a PR review
2021-03-12 04:22:34 +00:00
Paul Kuberry
e13ce390fe
Add internal package options to Trilinos ( #22205 )
...
Adds several EpetraExt_BUILD_* options as well as an Amesos2_ENABLE_Basker option. Adds `none` as an option to `gotype=`, which should be among the options since 'none' is specifically handled later in the package definition.
Adds `stokhos` and `trilinoscouplings` as options in spack which already are available in CMake for Trilinos (e.g. Trilinos_ENABLE_Stokhos:BOOL=)
2021-03-11 18:23:24 -08:00
BerengerBerthoul
ca4a566443
py-pytest-html recipe ( #22221 )
...
* py-pytest-html recipe
* added missing deps + copyright
* Update var/spack/repos/builtin/packages/py-pytest-html/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-pytest-metadata/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-03-12 02:17:12 +00:00
Thomas Kluyver
bb4ccdfa91
Add newest versions of py-h5py ( #22245 )
...
* Add newest versions of py-h5py
* Update dependencies for py-h5py
2021-03-12 00:39:25 +00:00
Tomoyasu Nojiri
952f76bda3
r-rhdf5filters: Fix for aarch64 ( #22074 )
2021-03-11 17:56:55 +00:00
Tomoyasu Nojiri
ab9580c168
bind9: add missing dependencies ( #22212 )
2021-03-11 16:32:29 +00:00
Tomoyasu Nojiri
e11f5df7dc
ctffind: update url and version directive ( #22039 )
2021-03-11 15:23:41 +00:00
Ye Luo
d0610f7a39
elpa: fix build of versions before 2020 with GCC >= 10 ( #22182 )
2021-03-11 09:43:53 +00:00
Andrew W Elble
31cf0e9c0d
py-imageio: new version 2.9.0 ( #22229 )
2021-03-11 04:41:13 +00:00
Gabriel Rockefeller
821769c95e
eospac: add patch to fix selection of compiler flags ( #21626 )
...
Patch eospac's Makefile.-linux-gnu.hashes to consider only `$(notdir
$(F90))` when constructing a key to look up compiler flags in the
_F90-CPUINFO_COMP_FLAGS associative array.
This patch was accepted into eospac itself after the release of
6.4.2beta, so apply it only to 6.4.2beta and earlier releases.
2021-03-11 01:47:13 +00:00
Benjamin Tovar
f346db83ac
cctools: add v7.2.1 ( #22193 )
2021-03-10 21:48:29 +00:00
David Pape
f73182fd98
gearshifft: fix patch, add support for mkl and rocm ( #22195 )
...
- Fix faulty patch
- Only use GEARSHIFFT_BACKEND_FFTW_PTHREADS if ~openmp
- Explicitly disable float16 support
- Use correct minimum required Boost version
- Add variants for Intel MKL and ROCm rocfft
2021-03-10 21:03:06 +00:00
Michael Kuhn
43473995ad
meson: apply rpath patch for current versions ( #22216 )
...
meson now only selectively strips rpaths but can still strip required
ones (like glib's pcre dependency).
2021-03-10 18:42:39 +00:00
darmac
d2ce4b565c
vigra: add master branch ( #22037 )
2021-03-10 17:57:35 +00:00
darmac
05dfd94ed7
haveged: new package at v1.9.13 ( #22127 )
2021-03-10 17:36:27 +00:00
Michael Kuhn
c65e660fbe
gdk-pixbuf: add v2.42.2 ( #22215 )
2021-03-10 16:44:15 +00:00
Michael Kuhn
ed4a468941
gcc: fix nvptx conflict ( #22214 )
...
In the past, we only had the binutils variant, which included the
bootstrapping flag. Now that we have a separate bootstrap variant, fix
the nvptx conflict accordingly.
2021-03-10 14:52:40 +00:00
darmac
df92f73c72
mii: add v1.0.4 ( #21754 )
...
mii: 1.0.3 and 1.0.2 is deprecated, and v1.0.4 can replace them safely
2021-03-10 14:22:21 +00:00
h-denpo
fc15f85986
gearshifft: add v0.4.0, remove v0.2.1-lw ( #21437 )
...
Changed maintainer
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
2021-03-10 11:00:36 +01:00
Andrew W Elble
81e3978759
gnutls: add v3.6.15 ( #22192 )
2021-03-10 10:53:35 +01:00
Andrew W Elble
f7c234f14c
salmon: add v1.4.0 ( #22201 )
...
devendored (most) dependencies, added missing dependencies.
added resources and bypassed external fetching.
2021-03-10 10:30:03 +01:00
Paul Kuberry
d2e759e614
compadre: add new package ( #22119 )
2021-03-10 10:25:59 +01:00
h-denpo
8849312e68
pocl: updated llvm dependency to require not having flang ( #22190 )
...
depends_on("llvm +clang +shared_libs -flang @6.0:11.0", when="@1.6")
2021-03-10 10:25:10 +01:00
Tomoyasu Nojiri
8de96cde08
lxc: fix install error ( #22206 )
2021-03-10 10:18:34 +01:00
Tomoyasu Nojiri
114bc95526
rsyslog: fix install error ( #22207 )
2021-03-10 10:17:50 +01:00
Tomoyasu Nojiri
6da24dee91
satsuma2: fix install error ( #22208 )
2021-03-10 10:16:59 +01:00
Tomoyasu Nojiri
8ff898a95e
warpx: add libs attribute to fix build on aarch64 ( #22072 )
...
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
2021-03-10 09:13:44 +00:00
Axel Huebl
8c613fadf0
BLAS++: OpenMP for AppleClang ( #22211 )
...
We need to install OpenMP for Apple's Clang.
2021-03-10 10:12:04 +01:00
m-shunji
55c1e76408
abinit: updated patch for Fujitsu compilers ( #22009 )
2021-03-10 09:58:38 +01:00
eugeneswalker
1492461b8e
netcdf-c@4.7.3:4.7.4 patch detection of pnetcdf for spectrum-mpi ( #22180 )
2021-03-09 15:11:49 -08:00
Fabian Brandt
3006da8197
Bump version libnetworkit/networkit 8.0 -> 8.1 ( #22194 )
...
Co-authored-by: FBT <fabian.brandt-tumescheit@hu-berlin.de>
2021-03-09 13:40:03 -07:00
eugeneswalker
d001a8945a
nalu-wind: add cuda variant ( #22184 )
2021-03-09 14:19:59 -06:00
Vasileios Karakasis
efecb22845
ReFrame 3.5.0 recipe ( #22196 )
2021-03-09 20:12:39 +01:00
Paul Kuberry
303230fe7f
Add pthread variant to kokkos-kernels ( #22120 )
2021-03-09 06:36:21 -07:00
Evan Felix
4d1d435330
Pacifica spack integration work ( #20485 )
...
* Add intel cluster package update2 for 2020
* add pacifica cli tools, and pager
* remove boilerplate code
* update flake8 lints
* update flake8 lint, missed one
* add a description for pager
* Shorten a line
* Remove whitespace
* check on dependencies and move urls to proper place
* Remove import package as it seems it is not required
* add requests to the uploader config
* remove blank Line
* change to build and run for packages
* add run and build to the packages
* move from url method to pypi method
* adjust requirements based on feedback from adamjstewart
* remove python 3 requirement, and add setuptools-scm
* remove dependence on python
Co-authored-by: Evan Felix <evan.felix@pnnl.gov>
2021-03-09 13:13:51 +00:00
Andrew W Elble
1fa16c1b9b
kicad: add v5.1.9 ( #22123 )
...
ngspice to v34
2021-03-09 09:45:45 +01:00
darmac
26e73e848d
iptraf-ng: new package at v1.2.1 ( #22155 )
2021-03-09 09:38:49 +01:00
darmac
2ba00262e5
hw-probe: new package at v1.5 ( #22156 )
2021-03-09 09:37:52 +01:00
darmac
bf4c4e9b32
ike-scan: new package at v1.9 ( #22160 )
2021-03-09 09:36:13 +01:00
darmac
4e185d48d1
libmacaroons: new package at v0.3.0 ( #22142 )
2021-03-09 09:32:35 +01:00
Adam Moody
d6fbf8ad57
scr: require dtcmp, switch from /tmp to /dev/shm ( #22073 )
2021-03-08 17:22:47 -08:00
a-saitoh-fj
8395df6b5b
DSQSS: Add test function, and Continuation of # 21666. ( #22103 )
2021-03-08 17:12:25 -08:00
Harmen Stoppels
1659beb220
Fix spack graph when deptypes are filtered ( #22121 )
2021-03-08 16:47:00 -08:00
Martin Pokorny
68d5f348e5
casacore: add v3.4.0 ( #22163 )
2021-03-08 21:26:44 +01:00
James Elliott
126ab70420
Update Cmake 3.19.x to support crayftn preprocessing (cce 11+) ( #22122 )
...
Cray added necessary functionality for CMake to support fortran preprocessing using crayftn. This patch is necessary for the current release of cmake (3.19), with this patched expected to be in the 3.20 release of Cmake. The included patch is from kitware.
see https://gitlab.kitware.com/cmake/cmake/-/merge_requests/5882
Co-authored-by: James Elliott <jjellio@sandia.govv>
2021-03-08 10:54:46 -08:00
Phil Carns
3d17936866
v0.9.1 release of mochi-margo ( #22164 )
2021-03-08 11:22:03 -07:00
Thomas Madlener
bc40c3af91
Add latest versions for lcio and sio ( #22173 )
2021-03-08 10:17:55 -08:00
David Poliakoff
a52beca2cf
Tuning variant for Kokkos packages ( #22176 )
2021-03-08 10:13:07 -08:00
Andrew W Elble
16adb5dd8f
py-tensorflow-probability: run install from correct working dir ( #22175 )
2021-03-08 09:58:08 -06:00
Kai Torben Ohlhus
b642871b23
suite-sparse: add v5.9.0 ( #22168 )
...
Update homepage URL and see release notes:
- https://github.com/DrTimothyAldenDavis/SuiteSparse/releases/tag/v5.9.0
2021-03-08 10:37:08 +00:00
Tomoyasu Nojiri
c25a723d74
kmod: add --with-bashcompletiondir option ( #22167 )
2021-03-08 10:21:15 +01:00
Axel Huebl
90ace2d0ec
catch2: add v2.13.4 ( #22170 )
...
Add the latest release of Catch2.
2021-03-08 10:20:21 +01:00
Tomoyasu Nojiri
2648fe902d
bpp-seq: add v2.4.1 ( #22171 )
2021-03-08 10:19:54 +01:00
Tomoyasu Nojiri
39e30520ce
bpp-core: add v2.4.1 ( #22172 )
2021-03-08 10:19:19 +01:00
Andrew W Elble
a0b5dcca3c
py-tensorflow-probability: new package ( #22165 )
...
* py-tensorflow-probability: new package
* setuptools dep, quoting syntax
2021-03-08 02:23:49 +00:00
darmac
e9c399110e
Add new package: r-mockery ( #22125 )
2021-03-06 13:51:53 -06:00
darmac
18ba1b8923
Add new package: r-lobstr ( #22069 )
2021-03-06 03:49:39 +00:00
Vanessasaurus
ef9a607c4c
libabigail: new package ( #22092 )
...
* adding package for libabigail, which we likely will need to use it for an analysis!
* includes variant for documentation (doxygen and pysphinx are associated dependencies)
2021-03-05 22:09:08 +00:00
Adam J. Stewart
89a4c9bb6d
gtkplus: add new version, convert to meson ( #21914 )
...
* gtkplus: add new version, convert to meson
* Add suggestions from aweits
2021-03-05 16:04:40 -05:00
Asher Mancinelli
da69f6eda8
Added support for disabling mumps in ipopt ( #21592 )
2021-03-05 11:32:11 -08:00
Martin Pokorny
4097a0c93f
casacore: use a modern CMake's version of FindHDF5.cmake ( #21882 )
...
Remove casacore's old version of the file with a package patch()
function, and depend on a modern CMake for the build.
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-03-05 16:05:37 +00:00
iarspider
ad9db839cf
syscalc: fix recipe and URL (extension) ( #22112 )
2021-03-05 16:21:12 +01:00
David Böhme
098b7b2e50
Add Caliper 2.5.0 and Adiak 0.3.0 ( #20718 )
2021-03-05 15:30:57 +01:00
emai-imcs
71dd8ed265
FEniCS: update of packages to support 2019.1.0 ( #21207 )
2021-03-05 07:27:35 -07:00
Vasileios Karakasis
3b1b51e90d
reframe: add v3.4.2 and v3.4.1, enable autocompletion ( #22114 )
2021-03-05 13:57:21 +00:00
Mathew Cleveland
ca3171d002
py-oppy: add v0_1_5 ( #22061 )
...
Co-authored-by: Cleveland <cleveland@lanl.gov>
2021-03-05 06:09:35 -07:00
thelfer
aa8079556a
tfel: add v3.3.1, fix typo in checksum of v3.4.0 ( #22062 )
2021-03-05 12:27:05 +01:00
iarspider
ea45b95039
pythia6: extra patch provided by CERN's EP-SFT ( #22055 )
2021-03-05 04:14:36 -07:00
snehring
daf2ef9682
mcl: fixing missing extern in global variables ( #22094 )
...
Revealed by GCC 10 see https://gcc.gnu.org/gcc-10/porting_to.html
2021-03-05 12:01:18 +01:00
darmac
3c1b305752
rtags: add v2.20 ( #22068 )
2021-03-05 11:28:45 +01:00
Valentin Volkl
70cd948852
dd4hep: add v0.16 and geant4units variant ( #22064 )
2021-03-05 11:28:05 +01:00
Mark W. Krentel
290df7a14a
hpcviewer: add version 2021.03 ( #22107 )
2021-03-05 10:08:09 +00:00
Tomoyasu Nojiri
d7c4f7b7e6
xfsprogs: add --with-systemd-unit-dir option ( #22075 )
2021-03-05 10:39:36 +01:00
Tomoyasu Nojiri
d3b10b04c1
freeipmi: add --with-systemdsystemunitdir option ( #22096 )
2021-03-05 10:38:19 +01:00
Tomoyasu Nojiri
97afb34ac3
keepalived: add --with-systemdsystemunitdir option ( #22098 )
2021-03-05 10:37:39 +01:00
Tomoyasu Nojiri
dc275e1f83
moosefs: add --with-systemdsystemunitdir option ( #22099 )
2021-03-05 10:36:32 +01:00
Tomoyasu Nojiri
346e6b3b77
rrdtool: add --with-systemdsystemunitdir option ( #22100 )
2021-03-05 10:30:34 +01:00
Adam J. Stewart
5fb0ff3906
py-torch: add v1.8.0 ( #22101 )
2021-03-05 10:21:39 +01:00
Adam J. Stewart
4261de5434
py-torchvision: add v0.9.0 ( #22102 )
2021-03-05 10:21:15 +01:00
Axel Huebl
c2925a1704
SLATE: Default ~cuda ( #22110 )
...
Same as BLAS++ since more GPU backends are coming and cuda
is usually off as a variant default in Spack, unless requested.
2021-03-05 10:11:16 +01:00
Tomoyasu Nojiri
03756583c3
py-python-ldap: add link dependency on cyrus-sasl ( #22105 )
2021-03-05 10:07:02 +01:00
Mark W. Krentel
c6b632a1f9
hpctoolkit: add version 2021.03.01 ( #22106 )
...
1. Add version 2021.03.01.
2. Cleanup the binutils dependencies now that 2.35.2 and 2.36 are available.
3. Require gcc 7.x or later for current 2021 version.
4. Simplify the xz depends to always require +pic.
This works around a glitch in the original concretizer.
2021-03-05 10:06:11 +01:00
h-denpo
c460013a91
flexi: allow building on aarch64 ( #22109 )
2021-03-05 10:02:15 +01:00
Valentin Volkl
e112a26513
py-awkward1: add v1.1.2 ( #22081 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-03-05 09:52:57 +01:00
Larry Knox
8bdd6c6f6d
hdf5: add v1.8.22. ( #22089 )
2021-03-04 20:04:52 +00:00
darmac
10c7831366
Add new package: perl-test-more ( #22076 )
...
* Add new package: perl-test-more
* perl-test-more: refine description
2021-03-04 10:04:57 -08:00
darmac
459b991e78
perl-test-output: new package at v1.033 ( #22077 )
2021-03-04 18:11:28 +01:00
Michael Kuron
7f01d1dc40
py-ase: add a build dependency on py-setuptools ( #22078 )
2021-03-04 18:09:37 +01:00
