Commit graph

21474 commits

Author SHA1 Message Date
Chris Richardson
f231ae97f4
Changes for ufl and basix (#24187) 2021-06-08 03:07:38 -06:00
Tamara Dahlgren
e1bd3ae4db
biobambam2: update stand-alone tests to use test stage work directory (#24111) 2021-06-08 09:30:21 +02:00
Massimiliano Culpo
729d66a3f8
Fix brittle unit-tests on providers (#24186)
These tests were broken by #24176
2021-06-07 22:16:14 +02:00
Michael Kuhn
4d55203ce5
build_systems: Make autotools builds verbose (#24161)
This is also what our other build systems are doing.
2021-06-07 14:05:35 -04:00
Valentin Volkl
2bdeaa1b48
pkgconf: disable check due to missing dependencies (#24168) 2021-06-07 12:01:24 -06:00
Adam J. Stewart
3d0bad465b
Docs: fix missing backtick in Environments docs (#24109) 2021-06-07 19:05:09 +02:00
Valentin Volkl
506d5744aa
delphes: add v3.5.0 (#24101) 2021-06-07 19:04:34 +02:00
Tamara Dahlgren
026cf7aa30
Update stand-alone tests to use test stage work directory (#24110) 2021-06-07 18:11:10 +02:00
Harmen Stoppels
e12b030def
mpich: fix constraints in provides directives (#24176) 2021-06-07 09:16:56 -06:00
Michael Kuhn
057bf434ce
netdata: add v1.31.0 (#24158)
This also adds some missing dependencies for core functionality.
2021-06-07 17:13:49 +02:00
Glenn Johnson
004f86aab7
r-rpostgres: add new package (#22442) 2021-06-07 17:10:46 +02:00
Glenn Johnson
c01730e33b
r-rmariadb: remove no longer needed patch (#24171)
Since PR #22873 was merged, the configure patch for r-rmariadb is no
longer needed. Also added comment regarding configure arguments.
2021-06-07 17:08:43 +02:00
psakievich
1fed008410
Add int64 back for hypre in nalu-wind (#24140)
To concretize the entire exawind environment together we need `hypre` to be built with the same flags for `nalu-wind` and `amr-wind`.  
@jrood-nrel
2021-06-07 07:35:26 -07:00
Chuck Atkins
b0590bf4e8
axl: Don't deprecate v0.3.0 as it's still actively required by veloc (#24179) 2021-06-07 07:35:08 -07:00
arjun-raj-kuppala
c2901ea14a
AMD ROCm release 4.2.0: bump up mivisionx version and add gtk option to opencv (#23881)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-06-07 15:31:17 +02:00
Harmen Stoppels
b17046723d
Revert "Bootstrap with -O3 in cmake (#23147)" (#24174)
This reverts commit fef05621a7.
2021-06-07 03:37:22 -06:00
Luca Heltai
f07be01fa8
arborx: enable trilinos 13+ (#24153) 2021-06-06 21:07:31 -06:00
Adam J. Stewart
559db31511
py-radiant-mlhub: add new package (#24167) 2021-06-06 21:04:30 -06:00
Adam J. Stewart
e1d194b9a3
NCCL: add new versions (#24155) 2021-06-06 22:22:21 -04:00
Peter Scheibel
6ed7d40be7
axom: don't require hdf5~shared (#24144) 2021-06-06 22:17:39 -04:00
Luca Heltai
1533c2fade
dealii: add support for arborx (#24154) 2021-06-06 22:16:43 -04:00
Glenn Johnson
986bcef160
darshan-runtime: add SGE scheduler (#24160)
* Set job_id for SGE in darshan-runtime package
* Use a multi value variant for scheduler

Only one scheduler can be selected so make the variant multi valued and
set multi=False.
2021-06-06 19:15:40 -04:00
Adam J. Stewart
09d317c293
py-pystac: add new package (#24166) 2021-06-06 19:11:08 -04:00
Adam J. Stewart
7093fb214f
py-tqdm: add version 4.56.2 (#24165) 2021-06-06 14:46:23 -06:00
Paul
534df5cd68
Add Go 1.16.5 and 1.15.13 (#24170) 2021-06-06 17:43:59 +02:00
Chuck Atkins
6c21d64c50
veloc: The axl dependency had an API change in 0.4.0 that breaks veloc (#24157) 2021-06-05 18:25:20 -06:00
Adam J. Stewart
3db5029a4b
GMT: add v6.2.0 (#24164) 2021-06-05 23:39:02 +00:00
Adam J. Stewart
7449d6950a
Fix git_version on macOS (#24163) 2021-06-05 23:30:28 +00:00
Tom Payerle
9f8e40e95c
hdf-eos5: Fix issue when linking against hdf5+szip (#23411) (#23412)
* hdf-eos5: Fix issue when linking against hdf5+szip (#23411)

Should fix issue #23411 when linking against hdf5+szip

Also fix bug if hdf5 does not depend on zlib

Reluctantly added payerle as a maintainer
2021-06-05 07:44:49 -04:00
Greg Becker
af3ebeeea1
apply default linux prefix inspections to all module sets (#24151) 2021-06-04 21:37:20 -06:00
Axel Huebl
42df61d631
py-warpx: 21.06 (#24152) 2021-06-04 21:50:48 -05:00
Tom Payerle
e741211c09
[py-cvxpy]: Add new version, fix depends_on versions (#24147)
Added version 1.1.13

Fixed versions for dependencies based on README.md for package
In particular:
   * versions 1.1.x require python@3, at least 3.4 and for 1.1.13 at least 3.6
   * py-osqp had been pinned to version 0.4.1, but README.md either shows
        no version restriction, of 0.4.1 and higher
   * @1.1.13 requires at least 1.1.6 of py-scs
   * I am assuming since 1.1.x is python@3 only, py-six no longer required
        (it was not explicitly showing up in README.md for these versions)
2021-06-04 17:55:26 -06:00
Manuela Kuhn
4cc27f58db
tk: fix url for patch (#24146) 2021-06-04 18:18:07 -05:00
Michael Kuhn
7d3a3af621
main, modules: fix module roots not being found (#24135)
Since the module roots were removed from the config file,
`--print-shell-vars` cannot find the module roots anymore. Fix it by
using the new `root_path` function. Moreover, the roots for lmod and
modules seems to have been flipped by accident.
2021-06-04 15:33:18 -07:00
Jen Herting
ff73ac6e9a
New package: py-python3-xlib (#24139)
* [py-python3-xlib] created template

* [py-python3-xlib] requires python3

* [py-python3-xlib] Final cleanup

- added homepage
- added description
- removed fixmes

* [py-python3-xlib] added homepage

* [py-python3-xlib] removing homepage entirely
2021-06-04 20:28:14 +00:00
Tamara Dahlgren
5c37db5db3
libceed: Update the hip-related variant (#24142) 2021-06-04 12:45:10 -07:00
Joe Heaton
13978d68ea
enable std c++14 (#24127) 2021-06-04 18:47:32 +00:00
arjun-raj-kuppala
54b9fe219b
opencv: Adding gtk variant (#23937) 2021-06-04 12:51:07 -05:00
ajaust
1fd1f1c93f
py-pyprecice: Add version 2.2.0.2 and 2.2.1.1 (#24138)
* add versions 2.2.0.2 and 2.2.1.1

* Add maintainer

Added Ishaan as additional maintainer as he is also maintainer of the Python bindings

* add new major precice version as dependency
2021-06-04 10:06:40 -05:00
Tamara Dahlgren
a0259cc4f4
Update stand-alone tests to use test stage work directory (#24130) 2021-06-04 07:28:03 -04:00
Michael Kuhn
d5d1d9548f
cmd/stage: print stage path (#24019)
This is a small quality of life improvement so that users can easily
copy and paste the stage path after executing `spack stage spec`.
2021-06-04 11:18:55 +00:00
Desmond Orton
e28e6d2618
gengeo: new package (#24126) 2021-06-04 10:15:28 +02:00
Greg Becker
d8fc38a467
bugfix: modules relative to view use top-level view root, not implementation root (#24124) 2021-06-04 10:13:14 +02:00
Michael Kuhn
c4c14e0c69
libbson, mongo-c-driver: add v1.17.6 (#24134) 2021-06-04 08:03:26 +00:00
Adam J. Stewart
c09eea5947
Don't warn about missing source id for external packages (#24125) 2021-06-04 09:55:09 +02:00
Adam J. Stewart
b03049e938
m4: secure_snprintf.patch is no longer needed for 1.4.19 (#24113) 2021-06-04 09:51:43 +02:00
Tom Scogland
b63a8b3e27
Speed-up version parsing and comparison (#22973)
The VALID_VERSION regex didn't check that the version string was
completely valid, only that a prefix of it was. This version ensures
the entire string represents a valid version.

This makes a few related changes.

1. Make the SEGMENT_REGEX identify *which* arm it matches by what groups
   are populated, including whether it's a string or int component or a
   separator all at once.

2. Use the updated regex to parse the input once with a findall rather
   than twice, once with findall and once with split, since the version
   components and separators can be distinguished by their group status.

3. Rather than "convert to int, on exception stay string," if the int
   group is set then convert to int, if not then construct an instance
   of the VersionStrComponent class

4. VersionStrComponent now implements all of the special string
   comparison logic as part of its __lt__ and __eq__ methods to deal
   with infinity versions and also overloads comparison with integers.

5. Version now uses direct tuple comparison since it has no per-element
   special logic outside the VersionStrComponent class.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-06-04 09:23:37 +02:00
Jen Herting
ea390198f4
New package: py-ibm-watson (#24115)
* [py-ibm-watson] created template

* [py-ibm-watson] added dependencies

* [py-ibm-watson] Final cleanup

- added homepage
- added description
- removed fixmes
2021-06-03 20:58:17 -06:00
Tamara Dahlgren
fb05d9830a
formetis: Update stand-alone tests to use test stage work directory (#24133) 2021-06-04 02:31:51 +00:00
Tamara Dahlgren
4ad779c4c4
formetis: correct the sha256 (#24131) 2021-06-04 02:27:53 +00:00