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Author SHA1 Message Date
Tim Haines
471f23e456
Limit binutils to <= 2.33.1 (#15470) 
HPCToolKit <= 2020.03.01 does not build with binutils 2.34.
 2020-03-14 07:45:00 -05:00
Hans Pabst
38d04e29eb
LIBXSMM 1.15 (#15482) 
* LIBXSMM 1.15

* LIBXSMM: renamed development version according to the related branch on GitHub.
 2020-03-13 14:44:26 -05:00
Adam J. Stewart
262a69c0a9
py-astpretty: add new package (#15484) 
* py-astpretty: add new package

* pkg_resources needed at run-time
 2020-03-13 14:40:58 -05:00
Michael Kuhn
14441e00dc
package: Add fetch_options variable (#15317) 
PR #15212 added a new connect_timeout option that can be overridden
using fetch_options but had to specified per-version. This adds a new
per-package variable that can be used to override fetch_options for
all versions in the package. This includes connect_timeout as well
as 'cookie' (e.g. for the jdk package).

Packages can combine package-level fetch_options with per-version
fetch_options, in which case the version fetch_options completely
override the package-level fetch_options.

This commit includes tests for the added behavior.
 2020-03-13 11:41:19 -07:00
Melven Roehrig-Zoellner
7b00712fff
pgi: add missing paths in setup_run_environment (#15480) 2020-03-13 13:07:35 -05:00
Thomas Kluyver
27bd4a5cdd
Add py-h5glance versions 0.5 & 0.6 (#15461) 
* Add py-h5glance versions 0.5 & 0.6

* List versions newest to oldest
 2020-03-13 08:05:31 -05:00
Hadrien G
a3c319979b
Add new ACTS version (#15479) 2020-03-13 12:57:32 +00:00
Adam J. Stewart
d1bf433d19
gitignore: pytest cache directory (#15476) 2020-03-13 09:39:34 +01:00
Hector
7ddd84ac14
Add source highlight package (#15473) 
* add GNU source-highlight package

* fix flake8

* Allows the package to download from GNU mirrors
 2020-03-12 19:26:45 -05:00
Michael Kuhn
9806149145
gcc: Add 9.3.0 (#15469) 2020-03-12 16:10:21 -05:00
noguchi-k
fddca6312c
cpprestsdk: fix common error and, use boost@1.69.0 or lower (#15463) 2020-03-12 16:09:07 -05:00
Tamara Dahlgren
f2a13af43e
testing: increase installer coverage (#15237) 2020-03-12 21:20:20 +01:00
David Böhme
b8064df495
Add Caliper v2.3.0 (#15468) 2020-03-12 13:37:15 -05:00
Amjad Kotobi
ed5b10d11f
Add package jblob-3.0 (#15400) 2020-03-12 13:35:30 -05:00
Joe Koning
d87f09cc5e
Change py-merlinwf to py-merlin (#15453) 
* Change py-merlinwf to py-merlin to match PyPi.
Change py-merlin to py-merlin-info.

Move to py-merlin_info.

Add py-merlin-info back in.

* Update dependent packages for the new merlin name.

* Remove non-working pyre and the associated packages, exchanger,
py-pythia and py-mlerin-info from citcoms.

* Remove blank line.
 2020-03-12 13:27:02 -05:00
Bryce Allen
6887cb3da4
pfunit: add max_array_rank=(int) variant (#15348) 
* pfunit: add max_array_rank=(int) variant

* pfunit: flake8 line length fixes
 2020-03-12 10:58:18 -06:00
Zhiyi Wu
d95766756c
Update plumed 2.5.4 and 2.6.0 (#15462) 
Co-authored-by: zhiyiwu <zhiyi.wu@gtc.ox.ac.uk>
 2020-03-12 10:47:26 -06:00
Thomas Gruber
e916a9424c
likwid: add compiler selection for ARM and POWER architecture (#14183) 
Co-Authored-By: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2020-03-12 14:44:43 +01:00
Jeffrey Salmond
ad1a28ee48
plumed: add cython as dependency (#15460) 2020-03-12 12:01:52 +01:00
Massimiliano Culpo
59b6822a47
Creating versions from urls doesn't modify class attributes (#15452) 
fixes #15449

Before this PR a call to pkg.url_for_version was modifying
class attributes determining different results for subsequents
calls and an error when the urls was empty.
 2020-03-12 09:21:19 +01:00
Massimiliano Culpo
a22d52a67d
Minor updates to CI configuration (#15458) 
* Check on Python versions uses action/checkout@v2
* Update the apt cache before installing system packages
 2020-03-12 08:19:42 +01:00
darmac
f4a5eb2b6d
add new package: lmbench (#15457) 
* add new package: lmbench

* refine LDFLAGS append call
 2020-03-11 22:49:22 -05:00
Nick Booher
8bdbd96e68
revbayes: Update URLs and hashes for old archives (#15451) 
* revbayes: Update URLs and hashes for old archives

* Switch to url_for_version

* Fix whitespace
 2020-03-11 22:04:59 -05:00
Les Kurz
99e465663a
Update package.py for HDF5 1.12.0 release (#15430) 
* Update package.py

* Update package.py

* add upper bounds to production config_option

* fix config_options

* Fix mistaken changes.
 2020-03-11 20:08:49 -05:00
darmac
77434c24a8
add new package: php (#15435) 2020-03-11 19:36:23 -05:00
Daryl W. Grunau
3e8f873b03
cpio: icc -no-gcc (#15446) 
Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
 2020-03-11 19:35:10 -05:00
Michael Kuhn
e01817cb15
binutils: Add missing texinfo dependency (#15444) 2020-03-11 19:34:24 -05:00
darmac
a9a59ea3b4
add new package: keyutils (#15433) 2020-03-11 19:29:31 -05:00
Stephanie Brink
6af8e19b2d
add hatchet python package (#15428) 2020-03-11 19:23:32 -05:00
Dr. Christian Tacke
12940f3448
libfabric@1.9.1: Add fabtests (#15440) 
The test utils for the new version 1.9.1 are missing.
Add them.
 2020-03-11 14:51:35 -05:00
Anthony Scemama
83584afa35
Package for the resultsFile Python module (#15088) 
* Added resultsFile package

* Added comments

* Fixed PEP8

* Added Python3 package

* Removed py-setuptools
 2020-03-11 14:44:36 -05:00
rvinaybharadwaj
87e69eed1c
Horovod (#15380) 2020-03-11 12:00:02 -06:00
Tamara Dahlgren
20c77cade5
bugfix: resolve undefined source_pkg_dir failure (#15339) 2020-03-11 11:39:23 +01:00
Greg Becker
299fa6b5ca
fetch_strategy: remove vestigial code (#15431) 2020-03-11 11:24:38 +01:00
Neil Flood
9b114c486f
kealib: moved to github, added v1.4.12 (#15436) 2020-03-11 11:06:18 +01:00
Hector
6d8cd446c5
Add valgrind variant to petsc (#15427) 
* Add PETSc valgrind dependency

* Remove +debug on valgrind dependency

* enh variant description
 2020-03-10 20:41:00 -05:00
Seth R. Johnson
8ac06ece3d
Fix OpenBLAS 0.2 build, 0.38+ Intel builds, and variant name (#15419) 
* Remove ARCH argument in OpenBLAS < 0.3.0

* Fix Intel OpenBLAS that uses lapack 0.3.9

* Improve variant name consistency

see https://github.com/spack/spack/issues/15239
 2020-03-10 16:40:03 -05:00
Mathias Anselmann
fc78456547
gcc: backporting fix for glibc 2.31 (#15403) 
* backporting fix for building gcc >= 8.1.0 and gcc <= 9.2.0 with binutils 2.31

* removed trailing whitespace
 2020-03-10 16:27:07 -05:00
Nisarg Patel
4ef0442a01
fix static mumps build error - Added a space at the end of ar vr for the static build to run successfully (#15407) 2020-03-10 16:23:41 -05:00
Toyohisa Kameyama
94b686e32b
libxpresent: Add some dependencies. (#15417) 
* libxpresent: Add some dependencies.

* Change *proto dependency type from build to link.
 2020-03-10 16:22:24 -05:00
Toyohisa Kameyama
9fba110372
libxpresent: Add some dependencies. (#15417) 
* libxpresent: Add some dependencies.

* Change *proto dependency type from build to link.
 2020-03-10 16:22:04 -05:00
Tomoki, Karatsu
03c684954e
r: Lower optimization level when using Fujitsu compiler@4.1.0. (#15418) 2020-03-10 16:21:14 -05:00
Dr. Christian Tacke
6993a82cb4
cryptsetup: Add pkgconfig dependency (#15422) 2020-03-10 16:18:59 -05:00
Elsa Gonsiorowski, PhD
9debb7e1b6
SCR: build with components (#14931) 
* scr: add develop, legacy branches; version 2.0.0

squash! scr: add develop and legacy versions

* filo: package for SCR component

* spath: package for SCR component

* axl: update for versions 0.3 and 0.2

* scr: build with components

* spath: structure of +mpi if/else

* 👌 capitalization of ecp-veloc

* scr: branches are always greater than any version
 2020-03-10 15:27:41 -05:00
broderickpt
c4c6accace
contrib-spiral: submit SPIRAL package recipe and HCOL package recipe … (#15188) 
* contrib-spiral: submit SPIRAL package recipe and HCOL package recipe (extension package for SPIRAL) to spack

* contrib-spiral: fix flake8 complaints for spiral & hcol

* contrib-spiral: Revisions to package recipes to address comments

* contrib-spiral: remove unecessary 'test' function

* contrib-spiral: update hcol package to install in <prefix>/namespaces/packages/hcol

* contrib-spiral: don't import os to hcol

* contrib-spiral: tweak hcol package recipe
 2020-03-10 13:07:53 -05:00
Greg Becker
bbbee6700b
bugfix: fix install_missing_compilers option bug from v0.14.0 (#15416) 
* bugfix: ensure bootstrapped compilers built before packages using the compiler
 2020-03-10 10:35:20 -07:00
Christoph Junghans
577860761b
decompressor: add support for bz2 (#15424) 2020-03-10 10:46:45 -06:00
Sergey Kosukhin
7118e24664
Parallel-netcdf: update package. (#15359) 
* Parallel-netcdf: update package.

* Add a temporary patch for version 'develop'.

* Rename version 'develop' to 'master'.

* Drop the patch for 'master'.
 2020-03-10 11:29:57 -05:00
Seth R. Johnson
21634e805e
libfabric: added v1.9.1 (#15405) 2020-03-10 17:09:46 +01:00
Christoph Junghans
7744070787
gromacs: remove simd variants (#13636) 2020-03-10 09:08:10 -06:00