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Added more FASTMath packages.

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This commit is contained in:
Saravan Pantham 2015-05-27 17:39:17 -07:00 committed by Todd Gamblin
parent 454d06c25c
commit fd34f4b119
13 changed files with 278 additions and 19 deletions
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22
var/spack/packages/arpack/package.py Normal file
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from spack import *
class Arpack(Package):
"""FIXME: put a proper description of your package here."""
homepage = "http://www.caam.rice.edu/software/ARPACK/"
url = "http://www.caam.rice.edu/software/ARPACK/SRC/arpack96.tar.gz"
version('96', 'fffaa970198b285676f4156cebc8626e')
depends_on('blas')
depends_on('lapack')
def install(self, spec, prefix):
move('./ARMAKES/ARmake.CRAY', './ARmake.inc')
filter_file('PLAT = CRAY', 'PLAT = ', './ARmake.inc', string=True)
filter_file('home = $(HOME)/ARPACK', 'home = %s' % pwd(), './ARmake.inc', string=True)
filter_file('BLASdir = $(home)/BLAS', 'BLASdir = %s' % spec['blas'].prefix, './ARmake.inc', string=True)
filter_file('LAPACKdir = $(home)/LAPACK', 'LAPACKdir = %s' % spec['lapack'].prefix, './ARmake.inc', string=True)
filter_file('ARPACKLIB = $(home)/libarpack_$(PLAT).a', 'ARPACKLIB = %s/lib/libarpack.a' % prefix, './ARmake.inc', string=True)
cd('./SRC')
make('all')

15
var/spack/packages/arpack/package.py.save Normal file
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from spack import *
class Arpack(Package):
"""ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems."""
homepage = "http://www.caam.rice.edu/software/ARPACK/"
url = "http://www.caam.rice.edu/software/ARPACK/SRC/arpack96.tar.gz"
version('96', 'fffaa970198b285676f4156cebc8626e')
depends_on("blas")
depends_on("lapack")
def install(self, spec, prefix):

15
var/spack/packages/boxlib/package.py Normal file
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from spack import *
class Boxlib(Package):
"""BoxLib, a software framework for massively parallel block-structured adaptive mesh refinement (AMR) codes."""
homepage = "https://ccse.lbl.gov/BoxLib/"
url = "https://ccse.lbl.gov/pub/Downloads/BoxLib.git";
version('master', 'https://ccse.lbl.gov/pub/Downloads/BoxLib.git')
def install(self, spec, prefix):
#configure("--prefix=%s" % prefix)
#make()
#make("install")
cd(pwd())

22
var/spack/packages/cblas/package.py Normal file
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from spack import *
import os
class Cblas(Package):
"""The BLAS (Basic Linear Algebra Subprograms) are routines that provide standard
building blocks for performing basic vector and matrix operations."""
homepage = "http://www.netlib.org/blas/_cblas/"
version('unversioned', '1e8830f622d2112239a4a8a83b84209a',
url='http://www.netlib.org/blas/blast-forum/cblas.tgz')
depends_on('blas')
parallel = False
def install(self, spec, prefix):
filter_file('BLLIB = /Users/julie/Documents/Boulot/lapack-dev/lapack/trunk/blas_LINUX.a', 'BLLIB = %s/libblas.a' % spec['blas'].prefix.lib, './Makefile.in', string=True)
make('all') # Compile.
mkdirp('%s' % prefix.lib) # Create the lib dir inside the install dir.
move('./lib/cblas_LINUX.a', '%s/libcblas.a' % prefix.lib) # Rename the generated lib file to libcblas.a

22
var/spack/packages/cgm/package.py Normal file
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from spack import *
class Cgm(Package):
"""The Common Geometry Module, Argonne (CGMA) is a code library which provides geometry functionality used for mesh generation and other applications."""
homepage = "http://trac.mcs.anl.gov/projects/ITAPS/wiki/CGM"
url = "http://ftp.mcs.anl.gov/pub/fathom/cgm13.1.1.tar.gz"
version('13.1.1', '4e8dbc4ba8f65767b29f985f7a23b01f')
version('13.1.0', 'a6c7b22660f164ce893fb974f9cb2028')
version('13.1' , '95f724bda04919fc76818a5b7bc0b4ed')
depends_on("openmpi")
def install(self, spec, prefix):
configure("--with-mpi",
"--prefix=%s" % prefix,
"CFLAGS=-static",
"CXXFLAGS=-static",
"FCFLAGS=-static")
make()
make("install")

15
var/spack/packages/fastmath/package.py Normal file
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from spack import *
class Fastmath(Package):
"""Dummy groupinstall package that installs all packages in the fastmath suite."""
homepage = "http://redmine.scorec.rpi.edu/projects/fastmath"
url = "http://www.netlib.org/blas/blas.tgz"
version('1.0', '5e99e975f7a1e3ea6abcad7c6e7e42e6')
depends_on('blas')
depends_on('lapack')
def install(self, spec, prefix):
pwd()

6
var/spack/packages/hdf5/package.py
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@ -23,9 +23,9 @@ def install(self, spec, prefix):
"--prefix=%s" % prefix,
"--with-zlib=%s" % spec['zlib'].prefix,
"--enable-parallel",
"--enable-shared",
"CC=%s" % spec['mpich'].prefix.bin + "/mpicc",
"CXX=%s" % spec['mpich'].prefix.bin + "/mpic++")
"--enable-shared")
# "CC=%s" % spec['mpich'].prefix.bin + "/mpicc",
# "CXX=%s" % spec['mpich'].prefix.bin + "/mpic++")
make()
make("install")

33
var/spack/packages/hypre/package.py Normal file
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from spack import *
class Hypre(Package):
"""Hypre is a library of high performance preconditioners that features parallel multigrid
methods for both structured and unstructured grid problems."""
homepage = "https://computation.llnl.gov/project/linear_solvers/software.php"
url = "https://computation.llnl.gov/project/linear_solvers/download/hypre-2.10.0b.tar.gz"
version('2.10.0b', '768be38793a35bb5d055905b271f5b8e')
depends_on("openmpi")
depends_on("blas")
depends_on("lapack")
def install(self, spec, prefix):
blas_dir = spec['blas'].prefix
lapack_dir = spec['lapack'].prefix
# Hypre's source is staged under ./src so we'll have to manually
# cd into it.
cd("./src")
configure(
"--prefix=%s" % prefix,
"--with-blas-libs=blas",
"--with-blas-lib-dirs=%s/lib" % blas_dir,
"--with-lapack-libs=\"lapack blas\"",
"--with-lapack-lib-dirs=%s/lib" % lapack_dir,
"--with-MPI")
make()
make("install")

26
var/spack/packages/hypre/package.py.save Normal file
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from spack import *
class Hypre(Package):
"""Hypre is a library of high performance preconditioners that features parallel multigrid
methods for both structured and unstructured grid problems."""
homepage = "https://computation.llnl.gov/project/linear_solvers/software.php"
url = "https://computation.llnl.gov/project/linear_solvers/download/hypre-2.10.0b.tar.gz"
version('2.10.0b', '768be38793a35bb5d055905b271f5b8e')
depends_on("openmpi")
depends_on("blas")
depends_on("lapack")
def install(self, spec, prefix):
lapack_dir = spec['lapack'].prefix
configure(
"--prefix=%s" % prefix,
"--with-blas-libs=blas",
"--with-blas-lib-dirs=%s/lib" % spec['blas'].prefix,
"--with-lapack-libs=lapack blas",
"--with-lapack-lib-dirs=%s/lib" % lapack_dir)
make()
make("install")

23
var/spack/packages/metis/package.py
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@ -5,28 +5,23 @@ class Metis(Package):
partitioning finite element meshes, and producing fill reducing
orderings for sparse matrices. The algorithms implemented in
METIS are based on the multilevel recursive-bisection,
multilevel k-way, and multi-constraint partitioning schemes
developed in our lab."""
multilevel k-way, and multi-constraint partitioning schemes."""
homepage = "http://glaros.dtc.umn.edu/gkhome/metis/metis/overview"
url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.1.0.tar.gz"
version('5.1.0', '5465e67079419a69e0116de24fce58fe')
# FIXME: Add dependencies if this package requires them.
# depends_on("foo")
def patch(self):
filter_file(r'#define IDXTYPEWIDTH 32', '#define IDXTYPEWIDTH 64', 'include/metis.h',
string=True)
depends_on('mpi')
def install(self, spec, prefix):
with working_dir('spack-build', create=True):
cmake('..',
'-DGKLIB_PATH=../GKlib',
'-DBUILD_SHARED_LIBS=TRUE',
cmake(".",
'-DGKLIB_PATH=%s/GKlib' % pwd(),
'-DSHARED=1',
'-DCMAKE_C_COMPILER=mpicc',
'-DCMAKE_CXX_COMPILER=mpicxx',
'-DSHARED=1',
*std_cmake_args)
make()
make("install")

26
var/spack/packages/parpack/package.py Normal file
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from spack import *
class Parpack(Package):
"""ARPACK is a collection of Fortran77 subroutines designed to solve large
scale eigenvalue problems."""
homepage = "http://www.caam.rice.edu/software/ARPACK/download.html"
url = "http://www.caam.rice.edu/software/ARPACK/SRC/parpack96.tar.Z"
version('96', 'a175f70ff71837a33ff7e4b0b6054f43')
depends_on('blas')
depends_on('lapack')
def install(self, spec, prefix):
move("./ARMAKES/ARmake.CJ", "./ARmake.inc");
filter_file('home = /home1/Netlib/ARPACK', 'home = %s' % pwd(), './ARmake.inc', string=True)
filter_file('PLAT = CJ', 'PLAT = ', './ARmake.inc', string=True)
filter_file('LAPACKdir = $(home)/LAPACK', 'LAPACKLIB = %s' % spec['lapack'].prefix, './ARmake.inc', string=True)
filter_file('BLASdir = $(home)/BLAS', 'BLASLIB = %s' % spec['blas'].prefix, './ARmake.inc', string=True)
filter_file('ARPACKLIB = $(home)/libarpack_$(PLAT).a', 'ARPACKLIB = %s/libarpack.a' % prefix, './ARmake.inc', string=True)
filter_file('MAKE = /bin/make', 'MAKE = make', './ARmake.inc', string=True)
filter_file('FFLAGS', '#FFLAGS', './ARmake.inc', string=True)
filter_file('FC = f77', 'FC = gfortran', './ARmake.inc', string=True)
cd('./PARPACK/SRC/MPI')
make('all')

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var/spack/packages/petsc/package.py Normal file
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from spack import *
class Petsc(Package):
"""PETSc is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations."""
homepage = "http://www.mcs.anl.gov/petsc/index.html"
url = "http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.5.3.tar.gz"
version('3.5.3', 'd4fd2734661e89f18ac6014b5dd1ef2f')
version('3.5.2', 'ad170802b3b058b5deb9cd1f968e7e13')
version('3.5.1', 'a557e029711ebf425544e117ffa44d8f')
depends_on("blas")
depends_on("lapack")
depends_on("hypre")
depends_on("parmetis")
depends_on("metis")
depends_on("hdf5")
def install(self, spec, prefix):
configure("--prefix=%s" % prefix,
"--with-blas-lib=%s/lib/libblas.a" % spec['blas'].prefix,
"--with-lapack-lib=%s/lib/liblapack.a" % spec['lapack'].prefix,
"--with-hypre-lib=%s/lib/libhypre.a" % spec['hypre'].prefix,
"--with-hypre-include=%s/include" % spec['hypre'].prefix,
"--with-parmetis-lib=%s/lib/libparmetis.a" % spec['parmetis'].prefix,
"--with-parmetis-include=%s/include" % spec['parmetis'].prefix,
"--with-metis-lib=%s/lib/libmetis.a" % spec['metis'].prefix,
"--with-metis-include=%s/include" % spec['metis'].prefix,
"--with-hdf5-lib=%s/lib/libhdf5.a" % spec['hdf5'].prefix,
"--with-hdf5-include=%s/include" % spec['hdf5'].prefix,
"--with-shared-libraries=0")
make()
make("install")

33
var/spack/packages/zoltan_distrib/package.py Normal file
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# FIXME:
# This is a template package file for Spack. We've conveniently
# put "FIXME" labels next to all the things you'll want to change.
#
# Once you've edited all the FIXME's, delete this whole message,
# save this file, and test out your package like this:
#
# spack install zoltan_distrib
#
# You can always get back here to change things with:
#
# spack edit zoltan_distrib
#
# See the spack documentation for more information on building
# packages.
#
from spack import *
class ZoltanDistrib(Package):
"""FIXME: put a proper description of your package here."""
homepage = "http://www.example.com"
url = "http://www.cs.sandia.gov/~kddevin/Zoltan_Distributions/zoltan_distrib_v3.81.tar.gz"
version('3.81', 'e0587ac69dbc3b17d28f515ed0933719')
def install(self, spec, prefix):
# FIXME: Modify the configure line to suit your build system here.
configure("--prefix=%s" % prefix)
# FIXME: Add logic to build and install here
make()
make("install")