hlrs-software-stack/spack
7
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity

Merge pull request #1406 from glennpj/r-np

Browse source 
New package - r-np
This commit is contained in:
Todd Gamblin 2016-07-31 22:15:37 -07:00 committed by GitHub
commit ea11aab71f
3 changed files with 134 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

43
var/spack/repos/builtin/packages/r-boot/package.py Normal file
View file

@ -0,0 +1,43 @@
##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class RBoot(Package):
"""Functions and datasets for bootstrapping from the book "Bootstrap
Methods and Their Application" by A. C. Davison and D. V. Hinkley (1997,
CUP), originally written by Angelo Canty for S."""
homepage = "https://cran.r-project.org/package=boot"
url = "https://cran.r-project.org/src/contrib/boot_1.3-18.tar.gz"
list_url = "https://cran.r-project.org/src/contrib/Archive/boot"
version('1.3-18', '711dd58af14e1027eb8377d9202e9b6f')
extends('R')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
self.stage.source_path)

41
var/spack/repos/builtin/packages/r-cubature/package.py Normal file
View file

@ -0,0 +1,41 @@
##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class RCubature(Package):
"""Adaptive multivariate integration over hypercubes"""
homepage = "https://cran.r-project.org/package=cubature"
url = "https://cran.r-project.org/src/contrib/cubature_1.1-2.tar.gz"
list_url = "https://cran.r-project.org/src/contrib/Archive/cubature"
version('1.1-2', '5617e1d82baa803a3814d92461da45c9')
extends('R')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
self.stage.source_path)

50
var/spack/repos/builtin/packages/r-np/package.py Normal file
View file

@ -0,0 +1,50 @@
##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class RNp(Package):
"""This package provides a variety of nonparametric (and semiparametric)
kernel methods that seamlessly handle a mix of continuous, unordered, and
ordered factor data types. We would like to gratefully acknowledge support
from the Natural Sciences and Engineering Research Council of Canada
(NSERC:www.nserc.ca), the Social Sciences and Humanities Research Council
of Canada (SSHRC:www.sshrc.ca), and the Shared Hierarchical Academic
Research Computing Network (SHARCNET:www.sharcnet.ca)."""
homepage = "https://github.com/JeffreyRacine/R-Package-np/"
url = "https://cran.r-project.org/src/contrib/np_0.60-2.tar.gz"
list_url = "https://cran.r-project.org/src/contrib/Archive/np"
version('0.60-2', 'e094d52ddff7280272b41e6cb2c74389')
extends('R')
depends_on('r-boot', type=nolink)
depends_on('r-cubature', type=nolink)
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
self.stage.source_path)