biobambam2: update stand-alone tests to use test stage work directory (#24111)
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1 changed files with 4 additions and 1 deletions
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@ -40,7 +40,10 @@ def cache_test_sources(self):
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self._fix_shortsort()
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def test(self):
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test_dir = join_path(self.install_test_root, self.test_src_dir)
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"""Perform stand-alone/smoke test on installed package."""
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test_dir = join_path(self.test_suite.current_test_cache_dir,
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self.test_src_dir)
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self.run_test('sh', ['testshortsort.sh'],
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expected='Alignments sorted by coordinate.',
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purpose='test: checking alignments',
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work_dir=test_dir)
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