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biobambam2: update stand-alone tests to use test stage work directory (#24111)

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Tamara Dahlgren 2021-06-08 00:30:21 -07:00 committed by GitHub
parent 729d66a3f8
commit e1bd3ae4db
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1 changed files with 4 additions and 1 deletions
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5
var/spack/repos/builtin/packages/biobambam2/package.py
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@ -40,7 +40,10 @@ def cache_test_sources(self):
self._fix_shortsort() self._fix_shortsort()
def test(self): def test(self):
test_dir = join_path(self.install_test_root, self.test_src_dir) """Perform stand-alone/smoke test on installed package."""
test_dir = join_path(self.test_suite.current_test_cache_dir,
self.test_src_dir)
self.run_test('sh', ['testshortsort.sh'], self.run_test('sh', ['testshortsort.sh'],
expected='Alignments sorted by coordinate.', expected='Alignments sorted by coordinate.',
purpose='test: checking alignments',
work_dir=test_dir) work_dir=test_dir)