e4s cray rhel stack: expand to full spec list (#40111)
* e4s cray rhel stack: expand to full spec list * comment out gasnet; require %gcc for unzip * require openblas@0.3.20 to get around %cce error; follow up with issue report * comment out failing specs; * comment out axom and xyce due to errors * improve clarity of failing specs
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eugeneswalker
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1 changed files with 127 additions and 18 deletions
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@ -21,47 +21,156 @@ spack:
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target: [zen4]
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variants: +mpi
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tbb:
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require: "intel-tbb"
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binutils:
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variants: +ld +gold +headers +libiberty ~nls
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hdf5:
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variants: +fortran +hl +shared
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libunwind:
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variants: +pic +xz
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ncurses:
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require: '@6.3 +termlib'
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openblas:
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require: '@0.3.20'
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variants: threads=openmp
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xz:
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variants: +pic
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boost:
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variants: +python +filesystem +iostreams +system
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cuda:
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version: [11.7.0]
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elfutils:
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variants: +bzip2 ~nls +xz
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require: '%gcc'
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require: "%gcc"
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hdf5:
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variants: +fortran +hl +shared
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libfabric:
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variants: fabrics=sockets,tcp,udp,rxm
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libunwind:
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variants: +pic +xz
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mpich:
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variants: ~wrapperrpath
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ncurses:
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variants: +termlib
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paraview:
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# Don't build GUI support or GLX rendering for HPC/container deployments
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require: "@5.11 ~qt+osmesa"
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python:
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version: [3.8.13]
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trilinos:
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require:
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- one_of: [+amesos +amesos2 +anasazi +aztec +boost +epetra +epetraext +ifpack
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+intrepid +intrepid2 +isorropia +kokkos +minitensor +nox +piro +phalanx
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+rol +rythmos +sacado +stk +shards +stratimikos +tempus +tpetra
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+trilinoscouplings +zoltan]
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- one_of: [gotype=long_long, gotype=all]
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- one_of: [~ml ~muelu ~zoltan2 ~teko, +ml +muelu +zoltan2 +teko]
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- one_of: [+superlu-dist, ~superlu-dist]
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- one_of: [+shylu, ~shylu]
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xz:
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variants: +pic
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mesa:
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version: [21.3.8]
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unzip:
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require: '%gcc'
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require: "%gcc"
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specs:
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- adios2
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# CPU
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- adios
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- aml
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- arborx
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- argobots
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- bolt
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- butterflypack
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- boost +python +filesystem +iostreams +system
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- cabana
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- caliper
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- chai ~benchmarks ~tests
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- charliecloud
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- conduit
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- datatransferkit
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- flecsi
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- flit
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- flux-core
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- fortrilinos
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- ginkgo
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- globalarrays
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- gmp
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- gotcha
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- h5bench
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- hdf5-vol-async
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- hdf5-vol-cache
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- hdf5-vol-log
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- heffte +fftw
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- hpx max_cpu_count=512 networking=mpi
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- hypre
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- kokkos
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- kokkos-kernels
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- kokkos +openmp
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- kokkos-kernels +openmp
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- lammps
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- legion
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- libnrm
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- libpressio +bitgrooming +bzip2 ~cuda ~cusz +fpzip +hdf5 +libdistributed
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+lua +openmp +python +sz +sz3 +unix +zfp +json +remote +netcdf +mgard
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- libquo
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- libunwind
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- mercury
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- metall
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- mfem
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- mgard +serial +openmp +timing +unstructured ~cuda
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- mpark-variant
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- mpifileutils ~xattr
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- nccmp
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- nco
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- netlib-scalapack
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- omega-h
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- openmpi
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- openpmd-api
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- papi
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- papyrus
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- pdt
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- petsc
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- plumed
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- precice
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- pumi
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- py-h5py +mpi
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- py-h5py ~mpi
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- py-libensemble +mpi +nlopt
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- py-petsc4py
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- qthreads scheduler=distrib
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- raja
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- slate ~cuda
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- slepc
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- stc
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- sundials
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- superlu
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- superlu-dist
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- tau
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- swig
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- swig@4.0.2-fortran
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- sz3
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- tasmanian
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- tau +mpi +python
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- trilinos@13.0.1 +belos +ifpack2 +stokhos
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- turbine
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- umap
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- umpire
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- veloc
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- wannier90
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# - alquimia # pflotran: petsc-3.19.4-c6pmpdtpzarytxo434zf76jqdkhdyn37/lib/petsc/conf/rules:169: material_aux.o] Error 1: fortran errors
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# - amrex # disabled temporarily pending resolution of unreproducible CI failure
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# - archer # subsumed by llvm +omp_tsan
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# - axom # axom: CMake Error at axom/sidre/cmake_install.cmake:154 (file): file INSTALL cannot find "/tmp/gitlab-runner-2/spack-stage/spack-stage-axom-0.8.1-jvol6riu34vuyqvrd5ft2gyhrxdqvf63/spack-build-jvol6ri/lib/fortran/axom_spio.mod": No such file or directory.
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# - bricks # bricks: clang-15: error: clang frontend command failed with exit code 134 (use -v to see invocation)
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# - dealii # llvm@14.0.6: ?; intel-tbb@2020.3: clang-15: error: unknown argument: '-flifetime-dse=1'; assimp@5.2.5: clang-15: error: clang frontend command failed with exit code 134 (use -v to see invocation)
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# - dyninst # requires %gcc
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# - ecp-data-vis-sdk ~cuda ~rocm +adios2 +ascent +cinema +darshan +faodel +hdf5 +paraview +pnetcdf +sz +unifyfs +veloc ~visit +vtkm +zfp ^hdf5@1.14 # llvm@14.0.6: ?;
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# - exaworks # rust: ld.lld: error: relocation R_X86_64_32 cannot be used against local symbol; recompile with -fPIC'; defined in /opt/cray/pe/cce/15.0.1/cce/x86_64/lib/no_mmap.o, referenced by /opt/cray/pe/cce/15.0.1/cce/x86_64/lib/no_mmap.o:(__no_mmap_for_malloc)
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# - gasnet # configure error: User requested --enable-ofi but I don't know how to build ofi programs for your system
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# - gptune # py-scipy: meson.build:82:0: ERROR: Unknown compiler(s): [['/home/gitlab-runner-3/builds/dWfnZWPh/0/spack/spack/lib/spack/env/cce/ftn']]
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# - hpctoolkit # dyninst requires %gcc
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# - nrm # py-scipy: meson.build:82:0: ERROR: Unknown compiler(s): [['/home/gitlab-runner-3/builds/dWfnZWPh/0/spack/spack/lib/spack/env/cce/ftn']]
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# - nvhpc # requires %gcc
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# - parsec ~cuda # parsec: parsec/fortran/CMakeFiles/parsec_fortran.dir/parsecf.F90.o: ftn-2103 ftn: WARNING in command line. The -W extra option is not supported or invalid and will be ignored.
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# - phist # fortran_bindings/CMakeFiles/phist_fort.dir/phist_testing.F90.o: ftn-78 ftn: ERROR in command line. The -f option has an invalid argument, "no-math-errno".
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# - plasma # %cce conflict
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# - py-jupyterhub # rust: ld.lld: error: relocation R_X86_64_32 cannot be used against local symbol; recompile with -fPIC'; defined in /opt/cray/pe/cce/15.0.1/cce/x86_64/lib/no_mmap.o, referenced by /opt/cray/pe/cce/15.0.1/cce/x86_64/lib/no_mmap.o:(__no_mmap_for_malloc)
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# - py-warpx # py-scipy: meson.build:82:0: ERROR: Unknown compiler(s): [['/home/gitlab-runner-3/builds/dWfnZWPh/0/spack/spack/lib/spack/env/cce/ftn']]
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# - quantum-espresso # quantum-espresso: CMake Error at cmake/FindSCALAPACK.cmake:503 (message): A required library with SCALAPACK API not found. Please specify library
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# - scr # scr: make[2]: *** [examples/CMakeFiles/test_ckpt_F.dir/build.make:112: examples/test_ckpt_F] Error 1: /opt/cray/pe/cce/15.0.1/binutils/x86_64/x86_64-pc-linux-gnu/bin/ld: /opt/cray/pe/mpich/8.1.25/ofi/cray/10.0/lib/libmpi_cray.so: undefined reference to `PMI_Barrier'
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# - strumpack ~slate # strumpack: [test/CMakeFiles/test_HSS_seq.dir/build.make:117: test/test_HSS_seq] Error 1: ld.lld: error: undefined reference due to --no-allow-shlib-undefined: mpi_abort_
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# - upcxx # upcxx: configure error: User requested --enable-ofi but I don't know how to build ofi programs for your system
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# - variorum # variorum: /opt/cray/pe/cce/15.0.1/binutils/x86_64/x86_64-pc-linux-gnu/bin/ld: /opt/cray/pe/lib64/libpals.so.0: undefined reference to `json_array_append_new@@libjansson.so.4'
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# - xyce +mpi +shared +pymi +pymi_static_tpls ^trilinos~shylu # openblas: ftn-2307 ftn: ERROR in command line: The "-m" option must be followed by 0, 1, 2, 3 or 4.; make[2]: *** [<builtin>: spotrf2.o] Error 1; make[1]: *** [Makefile:27: lapacklib] Error 2; make: *** [Makefile:250: netlib] Error 2
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mirrors: { "mirror": "s3://spack-binaries/develop/e4s-cray-rhel" }
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