From cef4c2fa1cb910c9582ef37a79988d8dc6012748 Mon Sep 17 00:00:00 2001 From: lingnanyuan <1297162327@qq.com> Date: Wed, 31 Jan 2018 06:12:43 -0600 Subject: [PATCH] maq: Create new package. (#7133) --- .../repos/builtin/packages/maq/package.py | 39 +++++++++++++++++++ 1 file changed, 39 insertions(+) create mode 100644 var/spack/repos/builtin/packages/maq/package.py diff --git a/var/spack/repos/builtin/packages/maq/package.py b/var/spack/repos/builtin/packages/maq/package.py new file mode 100644 index 0000000000..67ab4ae7fd --- /dev/null +++ b/var/spack/repos/builtin/packages/maq/package.py @@ -0,0 +1,39 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Maq(AutotoolsPackage): + """Maq is a software that builds mapping assemblies from short reads + generated by the next-generation sequencing machines.""" + + homepage = "http://maq.sourceforge.net/" + url = "https://downloads.sourceforge.net/project/maq/maq/0.7.1/maq-0.7.1.tar.bz2" + list_url = "https://sourceforge.net/projects/maq/files/maq/" + + version('0.7.1', '51130f6c8257c133719adacdd1433f35') + version('0.5.0', '854e2bee32d5237236d4c68c0ed7c52d') + + conflicts('%gcc@4.7.0:', when='@0.7.1')