filter_compiler_path: added the possibility to narrow search path

Following a comment from Todd, the search path for the files listed in
`filter_compiler_wrappers` can now be narrowed. Anyhow, the function
implementation still makes use of `find`, the rationale being that we
have already seen packages that install artifacts in e.g. architecture
dependent folders. The possibility to have a relative search path might
be a good compromise between the previous approach and the one suggested
in the review.

Also: 'ignore_absent' and 'backup' keyword arguments can be optionally
forwarded to `filter_file`.
This commit is contained in:
alalazo 2017-08-02 15:37:52 +02:00 committed by Todd Gamblin
parent 4e48bae096
commit c62b3eef55
6 changed files with 45 additions and 15 deletions

View file

@ -143,24 +143,47 @@ def filter_compiler_wrappers(*files, **kwargs):
whatever compiler they were built with.
Args:
*files: files to be filtered
**kwargs: at present supports the keyword 'after' to specify after
which phase the files should be filtered (defaults to 'install').
*files: files to be filtered relative to the search root (which is,
by default, the installation prefix)
**kwargs: allowed keyword arguments
after
specifies after which phase the files should be
filtered (defaults to 'install')
relative_root
path relative to prefix where to start searching for
the files to be filtered. If not set the install prefix
wil be used as the search root. **It is highly recommended
to set this, as searching from the installation prefix may
affect performance severely in some cases**.
ignore_absent, backup
these two keyword arguments, if present, will be forwarded
to ``filter_file`` (see its documentation for more information
on their behavior)
"""
after = kwargs.get('after', 'install')
relative_root = kwargs.get('relative_root', None)
filter_kwargs = {
'ignore_absent': kwargs.get('ignore_absent', True),
'backup': kwargs.get('backup', False),
'string': True
}
def _filter_compiler_wrappers_impl(self):
# Compute the absolute path of the search root
root = os.path.join(
self.prefix, relative_root
) if relative_root else self.prefix
# Compute the absolute path of the files to be filtered and
# remove links from the list.
abs_files = llnl.util.filesystem.find(self.prefix, files)
abs_files = llnl.util.filesystem.find(root, files)
abs_files = [x for x in abs_files if not os.path.islink(x)]
filter_kwargs = {
'ignore_absent': True,
'backup': False,
'string': True
}
x = llnl.util.filesystem.FileFilter(*abs_files)
x.filter(os.environ['CC'], self.compiler.cc, **filter_kwargs)

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@ -97,7 +97,7 @@ class Hdf5(AutotoolsPackage):
patch('h5f90global-mult-obj-same-equivalence-same-common-block.patch',
when='@1.10.1%intel@18')
filter_compiler_wrappers('h5cc', 'h5c++', 'h5fc')
filter_compiler_wrappers('h5cc', 'h5c++', 'h5fc', relative_root='bin')
def url_for_version(self, version):
url = "https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-{0}/hdf5-{1}/src/hdf5-{1}.tar.gz"

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@ -71,7 +71,9 @@ class Mpich(AutotoolsPackage):
provides('mpi@:3.0', when='@3:')
provides('mpi@:1.3', when='@1:')
filter_compiler_wrappers('mpicc', 'mpicxx', 'mpif77', 'mpif90')
filter_compiler_wrappers(
'mpicc', 'mpicxx', 'mpif77', 'mpif90', 'mpifort', relative_root='bin'
)
# fix MPI_Barrier segmentation fault
# see https://lists.mpich.org/pipermail/discuss/2016-May/004764.html

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@ -107,7 +107,9 @@ class Mvapich2(AutotoolsPackage):
depends_on('libpciaccess', when=(sys.platform != 'darwin'))
depends_on('cuda', when='+cuda')
filter_compiler_wrappers('mpicc', 'mpicxx', 'mpif77', 'mpif90', 'mpifort')
filter_compiler_wrappers(
'mpicc', 'mpicxx', 'mpif77', 'mpif90', 'mpifort', relative_root='bin'
)
def url_for_version(self, version):
base_url = "http://mvapich.cse.ohio-state.edu/download"

View file

@ -228,7 +228,8 @@ class Openmpi(AutotoolsPackage):
'mpif90-vt-wrapper-data.txt',
'mpif90-wrapper-data.txt',
'mpif77-vt-wrapper-data.txt',
'mpif77-wrapper-data.txt'
'mpif77-wrapper-data.txt',
relative_root=os.path.join('share', 'openmpi')
)
def url_for_version(self, version):

View file

@ -88,7 +88,9 @@ class R(AutotoolsPackage):
patch('zlib.patch', when='@:3.3.2')
filter_compiler_wrappers('Makeconf')
filter_compiler_wrappers(
'Makeconf', relative_root=os.path.join('rlib', 'R', 'etc')
)
@property
def etcdir(self):