Add bertini package
Also add missing dependency. Flex would not build for me without bison. It complained about not being able to find `yacc`.
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var/spack/repos/builtin/packages/bertini/package.py
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var/spack/repos/builtin/packages/bertini/package.py
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##############################################################################
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# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/llnl/spack
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# Please also see the LICENSE file for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class Bertini(Package):
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"""Bertini is a general-purpose solver, written in C, that was created
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for research about polynomial continuation. It solves for the numerical
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solution of systems of polynomial equations using homotopy continuation."""
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homepage = "https://bertini.nd.edu/"
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url = "https://bertini.nd.edu/BertiniSource_v1.5.tar.gz"
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version('1.5', 'e3f6cc6e7f9a0cf1d73185e8671af707')
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variant('mpi', default=True, description='Compile in parallel')
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depends_on('flex')
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depends_on('bison')
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depends_on('gmp')
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depends_on('mpfr')
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depends_on('mpi', when='+mpi')
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def install(self, spec, prefix):
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configure('--prefix=%s' % prefix)
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make()
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make("install")
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@ -33,6 +33,8 @@ class Flex(Package):
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version('2.6.0', '5724bcffed4ebe39e9b55a9be80859ec')
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version('2.5.39', 'e133e9ead8ec0a58d81166b461244fde')
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depends_on('bison')
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def install(self, spec, prefix):
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configure("--prefix=%s" % prefix)
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