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add version 1.0-4 to r-ldheatmap (#21070)

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Glenn Johnson 2021-01-17 14:07:27 -06:00 committed by GitHub
parent e316cde706
commit a54e4322e5
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1 changed files with 13 additions and 3 deletions
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var/spack/repos/builtin/packages/r-ldheatmap/package.py
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@ -7,16 +7,26 @@
class RLdheatmap(RPackage):
"""LDheatmap: Graphical Display of Pairwise Linkage Disequilibria Between
SNPs"""
"""Graphical Display of Pairwise Linkage Disequilibria Between SNPs
Produces a graphical display, as a heat map, of measures of pairwise
linkage disequilibria between single nucleotide polymorphisms (SNPs). Users
may optionally include the physical locations or genetic map distances of
each SNP on the plot. The methods are described in Shin et al. (2006)
<doi:10.18637/jss.v016.c03>. Users should note that the imported package
'snpStats' and the suggested packages 'rtracklayer', 'GenomicRanges',
'GenomInfoDb' and 'IRanges' are all BioConductor packages
<https://bioconductor.org>."""
homepage = "https://sfustatgen.github.io/LDheatmap/"
url = "https://cloud.r-project.org/src/contrib/LDheatmap_0.99-7.tar.gz"
list_url = "https://cloud.r-project.org/src/contrib/Archive/LDheatmap"
version('1.0-4', sha256='07eb385f19e6a195e8e4d75be0b47c57744eabbf14045e527f0c27e1183ae5ca')
version('0.99-7', sha256='aca54c839a424506d8be7153bf03b32026aeefe7ed38f534e8e19708e34212e4')
depends_on('r@2.14.0:', type=('build', 'run'))
depends_on('r@4.0:', when='@1.0-4:', type=('build', 'run'))
depends_on('r-genetics', type=('build', 'run'))
depends_on('r-rcpp', type=('build', 'run'))
depends_on('r-snpstats', type=('build', 'run'))
depends_on('r-rcpp', type=('build', 'run'))