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add version 1.0-4 to r-ldheatmap (#21070)

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Glenn Johnson 2021-01-17 14:07:27 -06:00 committed by GitHub
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commit a54e4322e5
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1 changed files with 13 additions and 3 deletions
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var/spack/repos/builtin/packages/r-ldheatmap/package.py
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@ -7,16 +7,26 @@
class RLdheatmap(RPackage): class RLdheatmap(RPackage):
"""LDheatmap: Graphical Display of Pairwise Linkage Disequilibria Between """Graphical Display of Pairwise Linkage Disequilibria Between SNPs
SNPs"""
Produces a graphical display, as a heat map, of measures of pairwise
linkage disequilibria between single nucleotide polymorphisms (SNPs). Users
may optionally include the physical locations or genetic map distances of
each SNP on the plot. The methods are described in Shin et al. (2006)
<doi:10.18637/jss.v016.c03>. Users should note that the imported package
'snpStats' and the suggested packages 'rtracklayer', 'GenomicRanges',
'GenomInfoDb' and 'IRanges' are all BioConductor packages
<https://bioconductor.org>."""
homepage = "https://sfustatgen.github.io/LDheatmap/" homepage = "https://sfustatgen.github.io/LDheatmap/"
url = "https://cloud.r-project.org/src/contrib/LDheatmap_0.99-7.tar.gz" url = "https://cloud.r-project.org/src/contrib/LDheatmap_0.99-7.tar.gz"
list_url = "https://cloud.r-project.org/src/contrib/Archive/LDheatmap" list_url = "https://cloud.r-project.org/src/contrib/Archive/LDheatmap"
version('1.0-4', sha256='07eb385f19e6a195e8e4d75be0b47c57744eabbf14045e527f0c27e1183ae5ca')
version('0.99-7', sha256='aca54c839a424506d8be7153bf03b32026aeefe7ed38f534e8e19708e34212e4') version('0.99-7', sha256='aca54c839a424506d8be7153bf03b32026aeefe7ed38f534e8e19708e34212e4')
depends_on('r@2.14.0:', type=('build', 'run')) depends_on('r@2.14.0:', type=('build', 'run'))
depends_on('r@4.0:', when='@1.0-4:', type=('build', 'run'))
depends_on('r-genetics', type=('build', 'run')) depends_on('r-genetics', type=('build', 'run'))
depends_on('r-rcpp', type=('build', 'run'))
depends_on('r-snpstats', type=('build', 'run')) depends_on('r-snpstats', type=('build', 'run'))
depends_on('r-rcpp', type=('build', 'run'))