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Merge pull request #812 from eschnett/eschnett/hdf5-check-install

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Check the installed HDF5 library for consistency
This commit is contained in:
Todd Gamblin 2016-05-10 01:34:10 -07:00
commit a1ebdf63f3
1 changed files with 58 additions and 3 deletions
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61
var/spack/repos/builtin/packages/hdf5/package.py
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@ -24,6 +24,7 @@
##############################################################################
from spack import *
import shutil
class Hdf5(Package):
@ -114,14 +115,16 @@ def install(self, spec, prefix):
# this is not actually a problem.
extra_args.extend([
"--enable-parallel",
"CC=%s" % spec['mpi'].prefix.bin + "/mpicc",
"CC=%s" % join_path(spec['mpi'].prefix.bin, "mpicc"),
])
if '+cxx' in spec:
extra_args.append("CXX=%s" % spec['mpi'].prefix.bin + "/mpic++")
extra_args.append("CXX=%s" % join_path(spec['mpi'].prefix.bin,
"mpic++"))
if '+fortran' in spec:
extra_args.append("FC=%s" % spec['mpi'].prefix.bin + "/mpifort")
extra_args.append("FC=%s" % join_path(spec['mpi'].prefix.bin,
"mpifort"))
if '+szip' in spec:
extra_args.append("--with-szlib=%s" % spec['szip'].prefix)
@ -138,6 +141,58 @@ def install(self, spec, prefix):
*extra_args)
make()
make("install")
self.check_install(spec)
def check_install(self, spec):
"Build and run a small program to test the installed HDF5 library"
print "Checking HDF5 installation..."
checkdir = "spack-check"
with working_dir(checkdir, create=True):
source = r"""
#include <hdf5.h>
#include <assert.h>
#include <stdio.h>
int main(int argc, char **argv) {
unsigned majnum, minnum, relnum;
herr_t herr = H5get_libversion(&majnum, &minnum, &relnum);
assert(!herr);
printf("HDF5 version %d.%d.%d %u.%u.%u\n", H5_VERS_MAJOR, H5_VERS_MINOR,
H5_VERS_RELEASE, majnum, minnum, relnum);
return 0;
}
"""
expected = """\
HDF5 version {version} {version}
""".format(version=str(spec.version))
with open("check.c", 'w') as f:
f.write(source)
if '+mpi' in spec:
cc = which(join_path(spec['mpi'].prefix.bin, "mpicc"))
else:
cc = which('cc')
# TODO: Automate these path and library settings
cc('-c', "-I%s" % join_path(spec.prefix, "include"), "check.c")
cc('-o', "check", "check.o",
"-L%s" % join_path(spec.prefix, "lib"), "-lhdf5",
"-lz")
try:
check = Executable('./check')
output = check(return_output=True)
except:
output = ""
success = output == expected
if not success:
print "Produced output does not match expected output."
print "Expected output:"
print '-'*80
print expected
print '-'*80
print "Produced output:"
print '-'*80
print output
print '-'*80
raise RuntimeError("HDF5 install check failed")
shutil.rmtree(checkdir)
def url_for_version(self, version):
v = str(version)