From 8f7b50b01f53c1519d5555b238c03fb45f8a8b17 Mon Sep 17 00:00:00 2001 From: Glenn Johnson Date: Fri, 15 Jan 2021 03:46:17 -0600 Subject: [PATCH] add version 2.4-1 to r-bio3d (#20816) --- .../repos/builtin/packages/r-bio3d/package.py | 16 +++++++++++++++- 1 file changed, 15 insertions(+), 1 deletion(-) diff --git a/var/spack/repos/builtin/packages/r-bio3d/package.py b/var/spack/repos/builtin/packages/r-bio3d/package.py index e366d005dd..e62bcd2733 100644 --- a/var/spack/repos/builtin/packages/r-bio3d/package.py +++ b/var/spack/repos/builtin/packages/r-bio3d/package.py @@ -7,12 +7,26 @@ class RBio3d(RPackage): - """bio3d: Biological Structure Analysis""" + """Biological Structure Analysis + + Utilities to process, organize and explore protein structure, sequence and + dynamics data. Features include the ability to read and write structure, + sequence and dynamic trajectory data, perform sequence and structure + database searches, data summaries, atom selection, alignment, + superposition, rigid core identification, clustering, torsion analysis, + distance matrix analysis, structure and sequence conservation analysis, + normal mode analysis, principal component analysis of heterogeneous + structure data, and correlation network analysis from normal mode and + molecular dynamics data. In addition, various utility functions are + provided to enable the statistical and graphical power of the R environment + to work with biological sequence and structural data. Please refer to the + URLs below for more information.""" homepage = "http://thegrantlab.org/bio3d/" url = "https://cloud.r-project.org/src/contrib/bio3d_2.3-4.tar.gz" list_url = "https://cloud.r-project.org/src/contrib/Archive/bio3d" + version('2.4-1', sha256='679fbd87fe9fb82a65427d281d3b68906509e411270cd87d2deb95d404333c1f') version('2.3-4', sha256='f9b39ab242cbedafcd98c1732cb1f5c0dd9ef66e28be39695e3420dd93e2bafe') depends_on('r@3.1.0:', type=('build', 'run'))