Add xl and spectrum mpi support for mumps (#3231)
* Add xl and spectrum mpi support for mumps * Incorporated Denis's comments. fPIC and if-else
This commit is contained in:
eklee15
Adam J. Stewart
parent
4e601bb6d3
commit
8b52a87285
2 changed files with 118 additions and 16 deletions
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@ -68,6 +68,9 @@ class Mumps(Package):
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depends_on('scalapack', when='+mpi')
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depends_on('mpi', when='+mpi')
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patch('spectrum-mpi-xl.patch', when='%xl^spectrum-mpi')
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patch('spectrum-mpi-xl.patch', when='%xl_r^spectrum-mpi')
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# this function is not a patch function because in case scalapack
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# is needed it uses self.spec['scalapack'].fc_link set by the
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# setup_dependent_environment in scalapck. This happen after patch
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@ -122,10 +125,17 @@ def write_makefile_inc(self):
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# when building shared libs need -fPIC, otherwise
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# /usr/bin/ld: graph.o: relocation R_X86_64_32 against `.rodata.str1.1'
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# can not be used when making a shared object; recompile with -fPIC
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fpic = '-fPIC' if '+shared' in self.spec else ''
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fpic = self.compiler.pic_flag if '+shared' in self.spec else ''
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# TODO: test this part, it needs a full blas, scalapack and
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# partitionning environment with 64bit integers
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if '+int64' in self.spec:
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if self.compiler.name == "xl" or self.compiler.name == "xl_r":
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makefile_conf.extend(
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['OPTF = -O3',
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'OPTL = %s -O3' % fpic,
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'OPTC = %s -O3-DINTSIZE64' % fpic])
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else:
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makefile_conf.extend(
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# the fortran compilation flags most probably are
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# working only for intel and gnu compilers this is
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@ -133,6 +143,12 @@ def write_makefile_inc(self):
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['OPTF = %s -O -DALLOW_NON_INIT %s' % (fpic, '-fdefault-integer-8' if self.compiler.name == "gcc" else '-i8'), # noqa
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'OPTL = %s -O ' % fpic,
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'OPTC = %s -O -DINTSIZE64' % fpic])
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else:
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if self.compiler.name == "xl" or self.compiler.name == "xl_r":
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makefile_conf.extend(
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['OPTF = -O3',
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'OPTL = %s -O3' % fpic,
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'OPTC = %s -O3' % fpic])
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else:
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makefile_conf.extend(
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['OPTF = %s -O -DALLOW_NON_INIT' % fpic,
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@ -142,11 +158,16 @@ def write_makefile_inc(self):
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if '+mpi' in self.spec:
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scalapack = self.spec['scalapack'].scalapack_libs
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makefile_conf.extend(
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["CC = %s" % join_path(self.spec['mpi'].prefix.bin, 'mpicc'),
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"FC = %s" % join_path(self.spec['mpi'].prefix.bin, 'mpif90'),
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"FL = %s" % join_path(self.spec['mpi'].prefix.bin, 'mpif90'),
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['CC = {0}'.format(self.spec['mpi'].mpicc),
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'FC = {0}'.format(self.spec['mpi'].mpifc),
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"SCALAP = %s" % scalapack.ld_flags,
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"MUMPS_TYPE = par"])
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if (self.spec.satisfies('%xl_r' or '%xl')) and self.spec.satisfies('^spectrum-mpi'): # noqa
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makefile_conf.extend(
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['FL = {0}'.format(self.spec['mpi'].mpicc)])
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else:
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makefile_conf.extend(
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['FL = {0}'.format(self.spec['mpi'].mpifc)])
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else:
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makefile_conf.extend(
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["CC = cc",
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@ -162,6 +183,7 @@ def write_makefile_inc(self):
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# hack defined by _DMAIN_COMP (see examples/c_example.c)
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makefile_conf.append("CDEFS = -DAdd_ -DMAIN_COMP")
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else:
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if self.compiler.name != "xl" and self.compiler.name != "xl_r":
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makefile_conf.append("CDEFS = -DAdd_")
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if '+shared' in self.spec:
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@ -179,6 +201,11 @@ def write_makefile_inc(self):
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'AR=$(FL) -shared -Wl,-soname -Wl,%s/$(notdir $@) -o' % prefix.lib, # noqa
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'RANLIB=echo'
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])
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if self.compiler.name == 'xl' or self.compiler.name == 'xl_r':
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makefile_conf.extend([
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'SAR=/bin/xlc -shared -Wl,-soname -Wl,%s/$(notdir $@) -o' % prefix.lib # noqa
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])
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else:
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makefile_conf.extend([
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'LIBEXT = .a',
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75
var/spack/repos/builtin/packages/mumps/spectrum-mpi-xl.patch
Normal file
75
var/spack/repos/builtin/packages/mumps/spectrum-mpi-xl.patch
Normal file
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@ -0,0 +1,75 @@
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diff -Naur MUMPS_5.0.1/Makefile MUMPS_5.0.1-patched/MUMPS_5.0.1/Makefile
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--- ./Makefile 2015-07-23 13:08:29.000000000 -0400
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+++ ./Makefile 2016-12-05 14:08:30.788638382 -0500
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@@ -62,7 +62,7 @@
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$(libdir)/libpord$(PLAT)$(LIBEXT):
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if [ "$(LPORDDIR)" != "" ] ; then \
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cd $(LPORDDIR); \
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- $(MAKE) CC="$(CC)" CFLAGS="$(OPTC)" AR="$(AR)" RANLIB="$(RANLIB)" OUTC="$(OUTC)" LIBEXT=$(LIBEXT); \
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+ $(MAKE) CC="$(CC)" CFLAGS="$(OPTC)" SAR="$(SAR)" RANLIB="$(RANLIB)" OUTC="$(OUTC)" LIBEXT=$(LIBEXT); \
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fi;
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if [ "$(LPORDDIR)" != "" ] ; then \
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cp $(LPORDDIR)/libpord$(LIBEXT) $@; \
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diff -Naur MUMPS_5.0.1/PORD/lib/Makefile MUMPS_5.0.1-patched/PORD/lib/MUMPS_5.0.1/Makefile
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--- ./PORD/lib/Makefile 2015-07-23 13:08:29.000000000 -0400
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+++ ./PORD/lib/Makefile 2016-12-05 11:26:24.785317467 -0500
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@@ -25,7 +25,7 @@
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$(CC) $(COPTIONS) -c $*.c $(OUTC)$*.o
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libpord$(LIBEXT):$(OBJS)
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- $(AR)$@ $(OBJS)
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+ $(SAR)$@ $(OBJS)
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$(RANLIB) $@
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clean:
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diff -Naur MUMPS_5.0.1/examples/Makefile MUMPS_5.0.1-patched/examples/Makefile
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--- ./examples/Makefile 2015-07-23 13:08:32.000000000 -0400
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+++ ./examples/Makefile 2016-12-05 14:36:10.692857906 -0500
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@@ -25,37 +25,30 @@
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LIBSMUMPS = $(libdir)/libsmumps$(PLAT)$(LIBEXT) $(LIBMUMPS_COMMON)
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-ssimpletest: $(LIBSMUMPS) $$@.o
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- $(FL) -o $@ $(OPTL) ssimpletest.o $(LIBSMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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+ssimpletest: $(LIBSMUMPS) $$@.F
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+ $(FC) -o $@ $(OPTF) $(INCS) -I. -I$(topdir)/include ssimpletest.F $(LIBSMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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LIBDMUMPS = $(libdir)/libdmumps$(PLAT)$(LIBEXT) $(LIBMUMPS_COMMON)
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-dsimpletest: $(LIBDMUMPS) $$@.o
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- $(FL) -o $@ $(OPTL) dsimpletest.o $(LIBDMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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+dsimpletest: $(LIBDMUMPS) $$@.F
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+ $(FC) -o $@ $(OPTF) $(INCS) -I. -I$(topdir)/include dsimpletest.F $(LIBDMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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LIBCMUMPS = $(libdir)/libcmumps$(PLAT)$(LIBEXT) $(LIBMUMPS_COMMON)
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-csimpletest: $(LIBCMUMPS) $$@.o
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- $(FL) -o $@ $(OPTL) csimpletest.o $(LIBCMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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+csimpletest: $(LIBCMUMPS) $$@.F
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+ $(FC) -o $@ $(OPTF) $(INCS) -I. -I$(topdir)/include csimpletest.F $(LIBCMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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LIBZMUMPS = $(libdir)/libzmumps$(PLAT)$(LIBEXT) $(LIBMUMPS_COMMON)
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-zsimpletest: $(LIBZMUMPS) $$@.o
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- $(FL) -o $@ $(OPTL) zsimpletest.o $(LIBZMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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+zsimpletest: $(LIBZMUMPS) $$@.F
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+ $(FC) -o $@ $(OPTF) $(INCS) -I. -I$(topdir)/include zsimpletest.F $(LIBZMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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-c_example: $(LIBDMUMPS) $$@.o
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- $(FL) -o $@ $(OPTL) $@.o $(LIBDMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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-
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-
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-.SUFFIXES: .c .F .o
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-.F.o:
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- $(FC) $(OPTF) $(INCS) -I. -I$(topdir)/include -c $*.F $(OUTF)$*.o
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-.c.o:
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- $(CC) $(OPTC) $(INCS) $(CDEFS) -I. -I$(topdir)/include -I$(topdir)/src -c $*.c $(OUTC)$*.o
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+c_example: $(LIBDMUMPS) $$@.c
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+ $(CC) -o $@ $(OPTC) $(INCS) -I. -I$(topdir)/include c_example.c $(LIBDMUMPS) $(LORDERINGS) $(LIBS) $(LIBBLAS) $(LIBOTHERS)
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$(libdir)/libsmumps$(PLAT)$(LIBEXT):
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