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Make sure base bioconductor package can be installed.

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This commit is contained in:
Glenn Johnson 2016-04-06 23:05:49 -05:00
parent b19d6ab9c5
commit 8a7f34665b
1 changed files with 13 additions and 0 deletions
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var/spack/repos/builtin/packages/r-BiocGenerics/package.py Normal file
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from spack import *
class RBiocgenerics(Package):
"""S4 generic functions needed by many Bioconductor packages."""
homepage = 'https://www.bioconductor.org/packages/release/bioc/html/BiocGenerics.html'
url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/BiocGenerics_0.16.1.tar.gz"
version('0.16.1', 'c2148ffd86fc6f1f819c7f68eb2c744f', expand=False)
extends('R')
def install(self, spec, prefix):
R('CMD', 'INSTALL', '--library=%s' % self.module.r_lib_dir, '%s' % self.stage.archive_file)