hlrs-software-stack/spack
7
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity

htslib, samtools: add v1.15 and v1.15.1 (#32259)

Browse source
This commit is contained in:
dunatotatos 2022-08-19 15:56:14 +02:00 committed by GitHub
parent 8773c183b5
commit 77c2332df6
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
2 changed files with 7 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

2
var/spack/repos/builtin/packages/htslib/package.py
View file

@ -12,6 +12,8 @@ class Htslib(AutotoolsPackage):
homepage = "https://github.com/samtools/htslib" homepage = "https://github.com/samtools/htslib"
url = "https://github.com/samtools/htslib/releases/download/1.13/htslib-1.13.tar.bz2" url = "https://github.com/samtools/htslib/releases/download/1.13/htslib-1.13.tar.bz2"
version("1.15.1", sha256="8d7f8bf9658226942eeab70af2a22aca618577eaa8fe2ed9416ee306d5351aa1")
version("1.15", sha256="1a9f49911503a22f56817cc82ea9b87fb7e7467b5ff989ca5aa61c12e7d532d9")
version("1.14", sha256="ed221b8f52f4812f810eebe0cc56cd8355a5c9d21c62d142ac05ad0da147935f") version("1.14", sha256="ed221b8f52f4812f810eebe0cc56cd8355a5c9d21c62d142ac05ad0da147935f")
version("1.13", sha256="f2407df9f97f0bb6b07656579e41a1ca5100464067b6b21bf962a2ea4b0efd65") version("1.13", sha256="f2407df9f97f0bb6b07656579e41a1ca5100464067b6b21bf962a2ea4b0efd65")
version("1.12", sha256="2280141b46e953ba4ae01b98335a84f8e6ccbdb6d5cdbab7f70ee4f7e3b6f4ca") version("1.12", sha256="2280141b46e953ba4ae01b98335a84f8e6ccbdb6d5cdbab7f70ee4f7e3b6f4ca")

5
var/spack/repos/builtin/packages/samtools/package.py
View file

@ -14,9 +14,12 @@ class Samtools(Package):
homepage = "https://www.htslib.org" homepage = "https://www.htslib.org"
url = "https://github.com/samtools/samtools/releases/download/1.13/samtools-1.13.tar.bz2" url = "https://github.com/samtools/samtools/releases/download/1.13/samtools-1.13.tar.bz2"
version("1.15.1", sha256="708c525ac76b0532b25f14aadea34a4d11df667bc19bf0a74dae617d80526c6e")
version("1.15", sha256="35d945a5eee9817a764490870474f24e538400b0397b28f94247a5b91447215d")
version("1.14", sha256="9341dabaa98b0ea7d60fd47e42af25df43a7d3d64d8e654cdf852974546b7d74") version("1.14", sha256="9341dabaa98b0ea7d60fd47e42af25df43a7d3d64d8e654cdf852974546b7d74")
version("1.13", sha256="616ca2e051cc8009a1e9c01cfd8c7caf8b70916ddff66f3b76914079465f8c60") version("1.13", sha256="616ca2e051cc8009a1e9c01cfd8c7caf8b70916ddff66f3b76914079465f8c60")
version("1.12", sha256="6da3770563b1c545ca8bdf78cf535e6d1753d6383983c7929245d5dba2902dcb") version("1.12", sha256="6da3770563b1c545ca8bdf78cf535e6d1753d6383983c7929245d5dba2902dcb")
version("1.11", sha256="e283cebd6c1c49f0cf8a3ca4fa56e1d651496b4d2e42f80ab75991a9ece4e5b6")
version("1.10", sha256="7b9ec5f05d61ec17bd9a82927e45d8ef37f813f79eb03fe06c88377f1bd03585") version("1.10", sha256="7b9ec5f05d61ec17bd9a82927e45d8ef37f813f79eb03fe06c88377f1bd03585")
version("1.9", sha256="083f688d7070082411c72c27372104ed472ed7a620591d06f928e653ebc23482") version("1.9", sha256="083f688d7070082411c72c27372104ed472ed7a620591d06f928e653ebc23482")
version("1.8", sha256="c942bc1d9b85fd1b05ea79c5afd2805d489cd36b2c2d8517462682a4d779be16") version("1.8", sha256="c942bc1d9b85fd1b05ea79c5afd2805d489cd36b2c2d8517462682a4d779be16")
@ -38,6 +41,8 @@ class Samtools(Package):
depends_on("python", type="run") depends_on("python", type="run")
# htslib became standalone @1.3.1, must use corresponding version # htslib became standalone @1.3.1, must use corresponding version
depends_on("htslib@1.15.1", when="@1.15.1")
depends_on("htslib@1.15", when="@1.15")
depends_on("htslib@1.14", when="@1.14") depends_on("htslib@1.14", when="@1.14")
depends_on("htslib@1.13", when="@1.13") depends_on("htslib@1.13", when="@1.13")
depends_on("htslib@1.12", when="@1.12") depends_on("htslib@1.12", when="@1.12")