From 68c2bdfaf6399ee3584bd30edad1b0b2607ab952 Mon Sep 17 00:00:00 2001 From: "Adam J. Stewart" Date: Tue, 24 Jul 2018 21:56:56 -0500 Subject: [PATCH] Further improvements to version parsing --- .../repos/builtin/packages/assimp/package.py | 2 +- .../repos/builtin/packages/bohrium/package.py | 2 +- .../repos/builtin/packages/er/package.py | 2 +- .../repos/builtin/packages/essl/package.py | 1 - .../builtin/packages/gearshifft/package.py | 3 +- .../builtin/packages/go-bootstrap/package.py | 2 +- .../repos/builtin/packages/kvtree/package.py | 2 +- .../repos/builtin/packages/latte/package.py | 2 +- .../repos/builtin/packages/ldc/package.py | 2 +- .../builtin/packages/libconfig/package.py | 2 +- .../repos/builtin/packages/miniamr/package.py | 2 +- .../repos/builtin/packages/opengl/package.py | 1 - .../repos/builtin/packages/openglu/package.py | 1 - .../repos/builtin/packages/pegtl/package.py | 2 +- .../perl-contextual-return/package.py | 2 +- .../builtin/packages/perl-gd-graph/package.py | 2 +- .../packages/perl-io-compress/package.py | 2 +- .../packages/perl-soap-lite/package.py | 2 +- .../builtin/packages/perl-version/package.py | 2 +- .../builtin/packages/py-pylint/package.py | 3 +- .../packages/quantum-espresso/package.py | 29 ++++--------------- .../builtin/packages/r-cluster/package.py | 2 +- .../repos/builtin/packages/r-rda/package.py | 3 +- .../builtin/packages/r-rsqlite/package.py | 3 +- .../builtin/packages/r-sfsmisc/package.py | 3 +- .../builtin/packages/r-spatial/package.py | 2 +- .../repos/builtin/packages/redset/package.py | 2 +- .../builtin/packages/rockstar/package.py | 1 - .../builtin/packages/sailfish/package.py | 2 +- .../builtin/packages/shuffile/package.py | 2 +- .../builtin/packages/spectrum-mpi/package.py | 6 +--- .../builtin/packages/votca-xtp/package.py | 2 +- .../repos/builtin/packages/yambo/package.py | 2 +- 33 files changed, 38 insertions(+), 60 deletions(-) diff --git a/var/spack/repos/builtin/packages/assimp/package.py b/var/spack/repos/builtin/packages/assimp/package.py index e365e83e72..9e3687a95d 100644 --- a/var/spack/repos/builtin/packages/assimp/package.py +++ b/var/spack/repos/builtin/packages/assimp/package.py @@ -30,7 +30,7 @@ class Assimp(CMakePackage): import various well-known 3D model formats in a uniform manner.""" homepage = "https://www.assimp.org" - url = "https://github.com/assimp/assimp/archive/v3.3.1.tar.gz" + url = "https://github.com/assimp/assimp/archive/v4.0.1.tar.gz" version('4.0.1', '23a6301c728a413aafbfa1cca19ba91f') diff --git a/var/spack/repos/builtin/packages/bohrium/package.py b/var/spack/repos/builtin/packages/bohrium/package.py index 1a2a39a8e1..704240d311 100644 --- a/var/spack/repos/builtin/packages/bohrium/package.py +++ b/var/spack/repos/builtin/packages/bohrium/package.py @@ -33,7 +33,7 @@ class Bohrium(CMakePackage, CudaPackage): """Library for automatic acceleration of array operations""" homepage = "http://bh107.org" - url = "https://github.com/bh107/bohrium/archive/v0.8.9.tar.gz" + url = "https://github.com/bh107/bohrium/archive/v0.9.0.tar.gz" git = "https://github.com/bh107/bohrium.git" maintainers = ['mfherbst'] diff --git a/var/spack/repos/builtin/packages/er/package.py b/var/spack/repos/builtin/packages/er/package.py index 90f7805da5..baf2d01db7 100644 --- a/var/spack/repos/builtin/packages/er/package.py +++ b/var/spack/repos/builtin/packages/er/package.py @@ -29,7 +29,7 @@ class Er(CMakePackage): """Encoding and redundancy on a file set""" homepage = "https://github.com/ECP-VeloC/er" - url = "https://github.com/ECP-VeloC/er/archive/v0.0.1.zip" + url = "https://github.com/ECP-VeloC/er/archive/v0.0.2.zip" git = "https://github.com/ecp-veloc/er.git" tags = ['ecp'] diff --git a/var/spack/repos/builtin/packages/essl/package.py b/var/spack/repos/builtin/packages/essl/package.py index f153735699..b1a7e39ea9 100644 --- a/var/spack/repos/builtin/packages/essl/package.py +++ b/var/spack/repos/builtin/packages/essl/package.py @@ -29,7 +29,6 @@ class Essl(Package): """IBM's Engineering and Scientific Subroutine Library (ESSL).""" homepage = "https://www.ibm.com/systems/power/software/essl/" - url = "ibm-essl" version('6.1') version('5.5') diff --git a/var/spack/repos/builtin/packages/gearshifft/package.py b/var/spack/repos/builtin/packages/gearshifft/package.py index 685a3e692f..f2a4d015a6 100644 --- a/var/spack/repos/builtin/packages/gearshifft/package.py +++ b/var/spack/repos/builtin/packages/gearshifft/package.py @@ -29,7 +29,8 @@ class Gearshifft(CMakePackage): """Benchmark Suite for Heterogenuous FFT Implementations""" homepage = "https://github.com/mpicbg-scicomp/gearshifft" - url = "https://github.com/mpicbg-scicomp/gearshifft/archive/v0.2.0.tar.gz" + url = "https://github.com/mpicbg-scicomp/gearshifft/archive/v0.2.1-lw.tar.gz" + maintainers = ['ax3l'] version('0.2.1-lw', 'c3208b767b24255b488a83e5d9e517ea') diff --git a/var/spack/repos/builtin/packages/go-bootstrap/package.py b/var/spack/repos/builtin/packages/go-bootstrap/package.py index 3e7784c22d..c7794a40e9 100644 --- a/var/spack/repos/builtin/packages/go-bootstrap/package.py +++ b/var/spack/repos/builtin/packages/go-bootstrap/package.py @@ -36,8 +36,8 @@ class GoBootstrap(Package): """Old C-bootstrapped go to bootstrap real go""" + homepage = "https://golang.org" - url = "https://go.googlesource.com/go" extendable = True diff --git a/var/spack/repos/builtin/packages/kvtree/package.py b/var/spack/repos/builtin/packages/kvtree/package.py index aeff98804d..46392716df 100644 --- a/var/spack/repos/builtin/packages/kvtree/package.py +++ b/var/spack/repos/builtin/packages/kvtree/package.py @@ -30,7 +30,7 @@ class Kvtree(CMakePackage): hashes.""" homepage = "https://github.com/ECP-VeloC/KVTree" - url = "https://github.com/ECP-VeloC/KVTree/archive/v1.0.0.zip" + url = "https://github.com/ECP-VeloC/KVTree/archive/v1.0.1.zip" git = "https://github.com/ecp-veloc/kvtree.git" tags = ['ecp'] diff --git a/var/spack/repos/builtin/packages/latte/package.py b/var/spack/repos/builtin/packages/latte/package.py index ce4246123f..badc09fbb1 100644 --- a/var/spack/repos/builtin/packages/latte/package.py +++ b/var/spack/repos/builtin/packages/latte/package.py @@ -30,7 +30,7 @@ class Latte(CMakePackage): """Open source density functional tight binding molecular dynamics.""" homepage = "https://github.com/lanl/latte" - url = "https://github.com/lanl/latte/tarball/v1.0" + url = "https://github.com/lanl/latte/tarball/v1.2.1" git = "https://github.com/lanl/latte.git" tags = ['ecp', 'ecp-apps'] diff --git a/var/spack/repos/builtin/packages/ldc/package.py b/var/spack/repos/builtin/packages/ldc/package.py index f4b007361f..04b2639192 100644 --- a/var/spack/repos/builtin/packages/ldc/package.py +++ b/var/spack/repos/builtin/packages/ldc/package.py @@ -36,7 +36,7 @@ class Ldc(CMakePackage): """ homepage = "https://dlang.org/" - url = "https://github.com/ldc-developers/ldc/releases/download/v0.17.4/ldc-0.17.4-src.tar.gz" + url = "https://github.com/ldc-developers/ldc/releases/download/v1.3.0/ldc-1.3.0-src.tar.gz" version('1.3.0', '537d992a361b0fd0440b24a5145c9107') diff --git a/var/spack/repos/builtin/packages/libconfig/package.py b/var/spack/repos/builtin/packages/libconfig/package.py index ea337d057e..b4a4927d61 100644 --- a/var/spack/repos/builtin/packages/libconfig/package.py +++ b/var/spack/repos/builtin/packages/libconfig/package.py @@ -29,7 +29,7 @@ class Libconfig(AutotoolsPackage): """C/C++ Configuration File Library""" homepage = "http://www.hyperrealm.com/libconfig/" - url = "https://github.com/hyperrealm/libconfig/archive/v1.6.tar.gz" + url = "https://github.com/hyperrealm/libconfig/archive/v1.5.tar.gz" force_autoreconf = True # there is currently a build error with version 1.6, see: diff --git a/var/spack/repos/builtin/packages/miniamr/package.py b/var/spack/repos/builtin/packages/miniamr/package.py index 838872fd7a..ae725bb868 100644 --- a/var/spack/repos/builtin/packages/miniamr/package.py +++ b/var/spack/repos/builtin/packages/miniamr/package.py @@ -32,7 +32,7 @@ class Miniamr(MakefilePackage): """ homepage = "https://mantevo.org" - url = "https://github.com/Mantevo/miniAMR/archive/v1.4.tar.gz" + url = "https://github.com/Mantevo/miniAMR/archive/v1.4.0.tar.gz" tags = ['proxy-app', 'ecp-proxy-app'] diff --git a/var/spack/repos/builtin/packages/opengl/package.py b/var/spack/repos/builtin/packages/opengl/package.py index ddcc273c3e..b970015c21 100644 --- a/var/spack/repos/builtin/packages/opengl/package.py +++ b/var/spack/repos/builtin/packages/opengl/package.py @@ -29,7 +29,6 @@ class Opengl(Package): """Placeholder for external OpenGL libraries from hardware vendors""" homepage = "https://www.opengl.org/" - url = "https://www.opengl.org/" # A second argument (usually the hash) must be supplied to the # version directive, but 'n/a' is used here because this package diff --git a/var/spack/repos/builtin/packages/openglu/package.py b/var/spack/repos/builtin/packages/openglu/package.py index a6e3283f30..3ffd6b1536 100644 --- a/var/spack/repos/builtin/packages/openglu/package.py +++ b/var/spack/repos/builtin/packages/openglu/package.py @@ -30,7 +30,6 @@ class Openglu(Package): vendors""" homepage = "https://www.opengl.org/resources/libraries" - url = "https://www.opengl.org/resources/libraries" # A second argument (usually the has) must be supplied to the # version directive, but 'n/a' is used here because this package diff --git a/var/spack/repos/builtin/packages/pegtl/package.py b/var/spack/repos/builtin/packages/pegtl/package.py index 0896371c3f..60fde4896f 100644 --- a/var/spack/repos/builtin/packages/pegtl/package.py +++ b/var/spack/repos/builtin/packages/pegtl/package.py @@ -34,7 +34,7 @@ class Pegtl(CMakePackage): """ homepage = "https://github.com/taocpp/PEGTL" - url = "https://github.com/taocpp/PEGTL/tarball/1.3.1" + url = "https://github.com/taocpp/PEGTL/tarball/2.1.4" git = "https://github.com/taocpp/PEGTL.git" version('develop', branch='master') diff --git a/var/spack/repos/builtin/packages/perl-contextual-return/package.py b/var/spack/repos/builtin/packages/perl-contextual-return/package.py index 8ed3db939a..fe8e271f8a 100644 --- a/var/spack/repos/builtin/packages/perl-contextual-return/package.py +++ b/var/spack/repos/builtin/packages/perl-contextual-return/package.py @@ -29,7 +29,7 @@ class PerlContextualReturn(PerlPackage): """Create context-sensitive return values""" homepage = "http://search.cpan.org/~dconway/Contextual-Return/lib/Contextual/Return.pm" - url = "http://search.cpan.org/CPAN/authors/id/D/DC/DCONWAY/Contextual-Return-0.004008.tar.gz" + url = "http://search.cpan.org/CPAN/authors/id/D/DC/DCONWAY/Contextual-Return-0.004014.tar.gz" version('0.004014', '5cb31f1637c17af6a8e5b852d820af79') diff --git a/var/spack/repos/builtin/packages/perl-gd-graph/package.py b/var/spack/repos/builtin/packages/perl-gd-graph/package.py index ea34760ae1..c745c6f75e 100644 --- a/var/spack/repos/builtin/packages/perl-gd-graph/package.py +++ b/var/spack/repos/builtin/packages/perl-gd-graph/package.py @@ -29,7 +29,7 @@ class PerlGdGraph(PerlPackage): """Graph Plotting Module for Perl 5""" homepage = "http://search.cpan.org/~bwarfield/GDGraph/Graph.pm" - url = "http://search.cpan.org/CPAN/authors/id/B/BW/BWARFIELD/GDGraph-1.44.tar.gz" + url = "http://search.cpan.org/CPAN/authors/id/B/BW/BWARFIELD/GDGraph-1.4308.tar.gz" version('1.4308', 'fcdd34d5e09ae917b5d264887734b3b1') diff --git a/var/spack/repos/builtin/packages/perl-io-compress/package.py b/var/spack/repos/builtin/packages/perl-io-compress/package.py index 5ae1dacd3a..c0eaac5aa4 100644 --- a/var/spack/repos/builtin/packages/perl-io-compress/package.py +++ b/var/spack/repos/builtin/packages/perl-io-compress/package.py @@ -30,7 +30,7 @@ class PerlIoCompress(PerlPackage): or lzop file/buffer.""" homepage = "http://search.cpan.org/~pmqs/IO-Compress-2.070/lib/IO/Uncompress/AnyUncompress.pm" - url = "http://search.cpan.org/CPAN/authors/id/P/PM/PMQS/IO-Compress-2.070.tar.gz" + url = "http://search.cpan.org/CPAN/authors/id/P/PM/PMQS/IO-Compress-2.081.tar.gz" version('2.081', '379932c1b9428b873ed7ad3c1db15872') diff --git a/var/spack/repos/builtin/packages/perl-soap-lite/package.py b/var/spack/repos/builtin/packages/perl-soap-lite/package.py index e0c6c4ad01..a2c4e94e38 100644 --- a/var/spack/repos/builtin/packages/perl-soap-lite/package.py +++ b/var/spack/repos/builtin/packages/perl-soap-lite/package.py @@ -29,7 +29,7 @@ class PerlSoapLite(PerlPackage): """Perl's Web Services Toolkit""" homepage = "http://search.cpan.org/~phred/SOAP-Lite-1.20/lib/SOAP/Lite.pm" - url = "http://search.cpan.org/CPAN/authors/id/P/PH/PHRED/SOAP-Lite-1.20.tar.gz" + url = "http://search.cpan.org/CPAN/authors/id/P/PH/PHRED/SOAP-Lite-1.22.tar.gz" version('1.22', '86c31341311498a08c6309e62168f655') diff --git a/var/spack/repos/builtin/packages/perl-version/package.py b/var/spack/repos/builtin/packages/perl-version/package.py index 77c963433a..8cbdc2bde0 100644 --- a/var/spack/repos/builtin/packages/perl-version/package.py +++ b/var/spack/repos/builtin/packages/perl-version/package.py @@ -29,7 +29,7 @@ class PerlVersion(PerlPackage): """Parse and manipulate Perl version strings""" homepage = "http://search.cpan.org/~bdfoy/Perl-Version-1.013/lib/Perl/Version.pm" - url = "http://search.cpan.org/CPAN/authors/id/B/BD/BDFOY/Perl-Version-1.013.tar.gz" + url = "http://search.cpan.org/CPAN/authors/id/B/BD/BDFOY/Perl-Version-1.013_03.tar.gz" version('1.013_03', 'b2c94c8b33ccfa1635c760fcfa1c5358') diff --git a/var/spack/repos/builtin/packages/py-pylint/package.py b/var/spack/repos/builtin/packages/py-pylint/package.py index 891b4c356a..0a5ab5b676 100644 --- a/var/spack/repos/builtin/packages/py-pylint/package.py +++ b/var/spack/repos/builtin/packages/py-pylint/package.py @@ -27,8 +27,9 @@ class PyPylint(PythonPackage): """array processing for numbers, strings, records, and objects.""" + homepage = "https://pypi.python.org/pypi/pylint" - url = "https://pypi.io/packages/source/p/pylint/pylint-1.7.2.tar.gz" + url = "https://pypi.io/packages/source/p/pylint/pylint-1.6.5.tar.gz" # version('1.7.2', '27ee752cdcfacb05bf4940947e6b35c6') # see dependencies version('1.6.5', '31da2185bf59142479e4fa16d8a9e347') diff --git a/var/spack/repos/builtin/packages/quantum-espresso/package.py b/var/spack/repos/builtin/packages/quantum-espresso/package.py index a90eaf4b9d..989dba3147 100644 --- a/var/spack/repos/builtin/packages/quantum-espresso/package.py +++ b/var/spack/repos/builtin/packages/quantum-espresso/package.py @@ -36,31 +36,12 @@ class QuantumEspresso(Package): """ homepage = 'http://quantum-espresso.org' - url = 'https://github.com/QEF/q-e/archive/qe-5.3.tar.gz' + url = 'https://github.com/QEF/q-e/archive/qe-6.2.0.tar.gz' - version( - '6.2.0', - '972176a58d16ae8cf0c9a308479e2b97', - url='https://github.com/QEF/q-e/archive/qe-6.2.0.tar.gz' - ) - - version( - '6.1.0', - '3fe861dcb5f6ec3d15f802319d5d801b', - url='https://github.com/QEF/q-e/archive/qe-6.1.0.tar.gz' - ) - - version( - '5.4.0', - '085f7e4de0952e266957bbc79563c54e', - url='https://github.com/QEF/q-e/archive/qe-5.4.tar.gz' - ) - - version( - '5.3.0', - 'be3f8778e302cffb89258a5f936a7592', - url='https://github.com/QEF/q-e/archive/qe-5.3.tar.gz' - ) + version('6.2.0', '972176a58d16ae8cf0c9a308479e2b97') + version('6.1.0', '3fe861dcb5f6ec3d15f802319d5d801b') + version('5.4', '085f7e4de0952e266957bbc79563c54e') + version('5.3', 'be3f8778e302cffb89258a5f936a7592') variant('mpi', default=True, description='Builds with mpi support') variant('openmp', default=False, description='Enables openMP support') diff --git a/var/spack/repos/builtin/packages/r-cluster/package.py b/var/spack/repos/builtin/packages/r-cluster/package.py index 5a7e222a14..e1ff7957fc 100644 --- a/var/spack/repos/builtin/packages/r-cluster/package.py +++ b/var/spack/repos/builtin/packages/r-cluster/package.py @@ -31,7 +31,7 @@ class RCluster(RPackage): (1990) "Finding Groups in Data".""" homepage = "https://cran.r-project.org/web/packages/cluster/index.html" - url = "https://cran.rstudio.com/src/contrib/cluster_2.0.6.tar.gz" + url = "https://cran.rstudio.com/src/contrib/cluster_2.0.7-1.tar.gz" list_url = "https://cran.r-project.org/src/contrib/Archive/cluster" version('2.0.7-1', 'a37add21b91d3e4f3883d005331e0d45') diff --git a/var/spack/repos/builtin/packages/r-rda/package.py b/var/spack/repos/builtin/packages/r-rda/package.py index dd3da00eac..b0f46b3e5b 100644 --- a/var/spack/repos/builtin/packages/r-rda/package.py +++ b/var/spack/repos/builtin/packages/r-rda/package.py @@ -30,6 +30,7 @@ class RRda(RPackage): classification purpose in high dimensional data.""" homepage = "https://cran.r-project.org/web/packages/rda/index.html" - url = "https://cran.r-project.org/src/contrib/rda_1.0.2-2.tar.gz" + url = "https://cran.r-project.org/src/contrib/rda_1.0.2-1.tar.gz" list_url = "https://cran.r-project.org/src/contrib/Archive/rda" + version('1.0.2-1', '78060c5e054a63a2df4ae4002d7247bc') diff --git a/var/spack/repos/builtin/packages/r-rsqlite/package.py b/var/spack/repos/builtin/packages/r-rsqlite/package.py index 4366a07841..91ba461a51 100644 --- a/var/spack/repos/builtin/packages/r-rsqlite/package.py +++ b/var/spack/repos/builtin/packages/r-rsqlite/package.py @@ -31,8 +31,9 @@ class RRsqlite(RPackage): (version 3.8.6) is included.""" homepage = "https://cran.rstudio.com/web/packages/RSQLite/index.html" - url = "https://cran.r-project.org/src/contrib/RSQLite_1.0.0.tar.gz" + url = "https://cran.r-project.org/src/contrib/RSQLite_2.0.tar.gz" list_url = "https://cran.r-project.org/src/contrib/Archive/RSQLite" + version('2.0', '63842410e78ccdfc52d4ee97992521d5') depends_on('r-dbi', type=('build', 'run')) diff --git a/var/spack/repos/builtin/packages/r-sfsmisc/package.py b/var/spack/repos/builtin/packages/r-sfsmisc/package.py index d7b58773b0..a57616e249 100644 --- a/var/spack/repos/builtin/packages/r-sfsmisc/package.py +++ b/var/spack/repos/builtin/packages/r-sfsmisc/package.py @@ -31,6 +31,7 @@ class RSfsmisc(RPackage): some were ported from S-plus.""" homepage = "https://cran.r-project.org/web/packages/sfsmisc/index.html" - url = "https://cran.r-project.org/src/contrib/sfsmisc_1.1-1.tar.gz" + url = "https://cran.r-project.org/src/contrib/sfsmisc_1.1-0.tar.gz" list_url = "https://cran.r-project.org/src/contrib/Archive/sfsmisc" + version('1.1-0', '1ba4303076e2bbf018f7eecc7d04e178') diff --git a/var/spack/repos/builtin/packages/r-spatial/package.py b/var/spack/repos/builtin/packages/r-spatial/package.py index cad613f7a4..6435d70f0e 100644 --- a/var/spack/repos/builtin/packages/r-spatial/package.py +++ b/var/spack/repos/builtin/packages/r-spatial/package.py @@ -29,7 +29,7 @@ class RSpatial(RPackage): """Functions for kriging and point pattern analysis.""" homepage = "http://www.stats.ox.ac.uk/pub/MASS4/" - url = "https://cran.r-project.org/src/contrib/spatial_7.3-11.tar.gz" + url = "https://cran.r-project.org/src/contrib/spatial_7.3-10.tar.gz" list_url = "https://cran.r-project.org/src/contrib/Archive/spatial" version('7.3-10', 'e544e3e3fd92e6868f29b8da2925b214') diff --git a/var/spack/repos/builtin/packages/redset/package.py b/var/spack/repos/builtin/packages/redset/package.py index 2211da06e7..0bd4ffc39f 100644 --- a/var/spack/repos/builtin/packages/redset/package.py +++ b/var/spack/repos/builtin/packages/redset/package.py @@ -29,7 +29,7 @@ class Redset(CMakePackage): """Create MPI communicators for disparate redundancy sets""" homepage = "https://github.com/ECP-VeloC/redset" - url = "https://github.com/ECP-VeloC/redset/archive/v0.0.1.zip" + url = "https://github.com/ECP-VeloC/redset/archive/v0.0.2.zip" git = "https://github.com/ecp-veloc/redset.git" tags = ['ecp'] diff --git a/var/spack/repos/builtin/packages/rockstar/package.py b/var/spack/repos/builtin/packages/rockstar/package.py index 5b32230b59..f77403495f 100644 --- a/var/spack/repos/builtin/packages/rockstar/package.py +++ b/var/spack/repos/builtin/packages/rockstar/package.py @@ -32,7 +32,6 @@ class Rockstar(MakefilePackage): """The Rockstar Halo Finder""" homepage = "https://bitbucket.org/gfcstanford/rockstar" - url = "https://bitbucket.org/gfcstanford/rockstar" version('develop', git='https://bitbucket.org/gfcstanford/rockstar.git') version('yt', hg='https://bitbucket.org/MatthewTurk/rockstar') diff --git a/var/spack/repos/builtin/packages/sailfish/package.py b/var/spack/repos/builtin/packages/sailfish/package.py index 3be75d169d..132cc55770 100644 --- a/var/spack/repos/builtin/packages/sailfish/package.py +++ b/var/spack/repos/builtin/packages/sailfish/package.py @@ -29,7 +29,7 @@ class Sailfish(CMakePackage): """Sailfish is a tool for transcript quantification from RNA-seq data.""" homepage = "http://www.cs.cmu.edu/~ckingsf/software/sailfish" - url = "https://github.com/kingsfordgroup/sailfish/archive/v0.10.0.tar.gz" + url = "https://github.com/kingsfordgroup/sailfish/archive/v0.10.1.tar.gz" version('0.10.1', 'e6dab4cf3a39f346df7c28f40eb58cad') diff --git a/var/spack/repos/builtin/packages/shuffile/package.py b/var/spack/repos/builtin/packages/shuffile/package.py index 05d9d94e0b..2026f51b28 100644 --- a/var/spack/repos/builtin/packages/shuffile/package.py +++ b/var/spack/repos/builtin/packages/shuffile/package.py @@ -29,7 +29,7 @@ class Shuffile(CMakePackage): """Shuffle files between MPI ranks""" homepage = "https://github.com/ECP-VeloC/shuffile" - url = "https://github.com/ECP-VeloC/shuffile/archive/v0.0.1.zip" + url = "https://github.com/ECP-VeloC/shuffile/archive/v0.0.2.zip" git = "https://github.com/ecp-veloc/shuffile.git" tags = ['ecp'] diff --git a/var/spack/repos/builtin/packages/spectrum-mpi/package.py b/var/spack/repos/builtin/packages/spectrum-mpi/package.py index e094f1c3ad..cbbd65a5f3 100644 --- a/var/spack/repos/builtin/packages/spectrum-mpi/package.py +++ b/var/spack/repos/builtin/packages/spectrum-mpi/package.py @@ -26,13 +26,9 @@ class SpectrumMpi(Package): - """ - IBM MPI implementation from Spectrum MPI. - - """ + """IBM MPI implementation from Spectrum MPI.""" homepage = "http://www-03.ibm.com/systems/spectrum-computing/products/mpi" - url = "http://www-03.ibm.com/systems/spectrum-computing/products/mpi" provides('mpi') diff --git a/var/spack/repos/builtin/packages/votca-xtp/package.py b/var/spack/repos/builtin/packages/votca-xtp/package.py index c4740f0f8b..2d0408cb87 100644 --- a/var/spack/repos/builtin/packages/votca-xtp/package.py +++ b/var/spack/repos/builtin/packages/votca-xtp/package.py @@ -34,7 +34,7 @@ class VotcaXtp(CMakePackage): This package contains the VOTCA exciton transport engine. """ homepage = "http://www.votca.org" - url = "https://github.com/votca/xtp/tarball/v1.4" + url = "https://github.com/votca/xtp/tarball/v1.4.1" git = "https://github.com/votca/xtp.git" version('develop', branch='master') diff --git a/var/spack/repos/builtin/packages/yambo/package.py b/var/spack/repos/builtin/packages/yambo/package.py index 7605af81d3..5fc66fe2d4 100644 --- a/var/spack/repos/builtin/packages/yambo/package.py +++ b/var/spack/repos/builtin/packages/yambo/package.py @@ -37,7 +37,7 @@ class Yambo(AutotoolsPackage): """ homepage = "http://www.yambo-code.org/index.php" - url = "https://github.com/yambo-code/yambo/archive/4.1.3.tar.gz" + url = "https://github.com/yambo-code/yambo/archive/4.2.2.tar.gz" version('4.2.2', '97f3513bd726141be5e18072118b6fb5') version('4.2.1', '99027014192c0f0f4b5d9b48414ad85d')