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Fix undefined symbols by building shared libraries

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This commit is contained in:
Adam J. Stewart 2016-07-20 12:57:43 -05:00
parent bdb64c2e39
commit 5cac0a528c
5 changed files with 21 additions and 20 deletions
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3
var/spack/repos/builtin/packages/harminv/package.py
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@ -44,7 +44,8 @@ def install(self, spec, prefix):
config_args = [ config_args = [
'--prefix={0}'.format(prefix), '--prefix={0}'.format(prefix),
'--with-blas={0}'.format(spec['blas'].prefix.lib), '--with-blas={0}'.format(spec['blas'].prefix.lib),
'--with-lapack={0}'.format(spec['lapack'].prefix.lib) '--with-lapack={0}'.format(spec['lapack'].prefix.lib),
'--enable-shared'
] ]
configure(*config_args) configure(*config_args)

3
var/spack/repos/builtin/packages/libatomic-ops/package.py
View file

@ -35,7 +35,8 @@ class LibatomicOps(Package):
version('7.4.4', '426d804baae12c372967a6d183e25af2') version('7.4.4', '426d804baae12c372967a6d183e25af2')
def install(self, spec, prefix): def install(self, spec, prefix):
configure('--prefix={0}'.format(prefix)) configure('--prefix={0}'.format(prefix),
'--enable-shared')
make() make()
make('install') make('install')

1
var/spack/repos/builtin/packages/libctl/package.py
View file

@ -38,6 +38,7 @@ class Libctl(Package):
def install(self, spec, prefix): def install(self, spec, prefix):
configure('--prefix={0}'.format(prefix), configure('--prefix={0}'.format(prefix),
'--enable-shared',
'GUILE={0}'.format(join_path( 'GUILE={0}'.format(join_path(
spec['guile'].prefix.bin, 'guile')), spec['guile'].prefix.bin, 'guile')),
'GUILE_CONFIG={0}'.format(join_path( 'GUILE_CONFIG={0}'.format(join_path(

30
var/spack/repos/builtin/packages/meep/package.py
View file

@ -35,14 +35,14 @@ class Meep(Package):
version('1.2.1', '9be2e743c3a832ae922de9d955d016c5') version('1.2.1', '9be2e743c3a832ae922de9d955d016c5')
version('1.1.1', '415e0cd312b6caa22b5dd612490e1ccf') version('1.1.1', '415e0cd312b6caa22b5dd612490e1ccf')
variant('blas', default=True, description='Enable BLAS support') variant('blas', default=True, description='Enable BLAS support')
variant('lapack', default=True, description='Enable LAPACK support') variant('lapack', default=True, description='Enable LAPACK support')
variant('harminv', default=True, description='Enable Harminv support') variant('harminv', default=True, description='Enable Harminv support')
variant('guile', default=True, description='Enable Guilde support') variant('guile', default=True, description='Enable Guilde support')
variant('libctl', default=True, description='Enable libctl support') variant('libctl', default=True, description='Enable libctl support')
variant('mpi', default=True, description='Enable MPI support') variant('mpi', default=True, description='Enable MPI support')
variant('hdf5', default=True, description='Enable HDF5 support') variant('hdf5', default=True, description='Enable HDF5 support')
variant('gsl', default=False, description='Build with GSL (only necessary for testing)') variant('gsl', default=True, description='Enable GSL support')
depends_on('blas', when='+blas') depends_on('blas', when='+blas')
depends_on('lapack', when='+lapack') depends_on('lapack', when='+lapack')
@ -50,7 +50,7 @@ class Meep(Package):
depends_on('guile', when='+guile') depends_on('guile', when='+guile')
depends_on('libctl@3.2:', when='+libctl') depends_on('libctl@3.2:', when='+libctl')
depends_on('mpi', when='+mpi') depends_on('mpi', when='+mpi')
depends_on('hdf5', when='+hdf5') depends_on('hdf5~mpi', when='+hdf5~mpi')
depends_on('hdf5+mpi', when='+hdf5+mpi') depends_on('hdf5+mpi', when='+hdf5+mpi')
depends_on('gsl', when='+gsl') depends_on('gsl', when='+gsl')
@ -62,12 +62,10 @@ def url_for_version(self, version):
return "{0}/old/meep-{1}.tar.gz".format(base_url, version) return "{0}/old/meep-{1}.tar.gz".format(base_url, version)
def install(self, spec, prefix): def install(self, spec, prefix):
# Must be compiled with -fPIC for py-meep config_args = [
env['CFLAGS'] = '-fPIC' '--prefix={0}'.format(prefix),
env['CXXFLAGS'] = '-fPIC' '--enable-shared'
env['FFLAGS'] = '-fPIC' ]
config_args = ['--prefix={0}'.format(prefix)]
if '+blas' in spec: if '+blas' in spec:
config_args.append('--with-blas={0}'.format( config_args.append('--with-blas={0}'.format(
@ -103,7 +101,7 @@ def install(self, spec, prefix):
# aniso_disp test fails unless installed with harminv # aniso_disp test fails unless installed with harminv
# near2far test fails unless installed with gsl # near2far test fails unless installed with gsl
if '+harminv' in spec and '+gsl' in spec: if self.run_tests and '+harminv' in spec and '+gsl' in spec:
# Most tests fail when run in parallel # Most tests fail when run in parallel
# 2D_convergence tests still fails to converge for unknown reasons # 2D_convergence tests still fails to converge for unknown reasons
make('check', parallel=False) make('check', parallel=False)

4
var/spack/repos/builtin/packages/py-meep/package.py
View file

@ -41,8 +41,8 @@ class PyMeep(Package):
depends_on('py-scipy') depends_on('py-scipy')
depends_on('py-matplotlib') depends_on('py-matplotlib')
depends_on('mpi', when='+mpi') # OpenMPI 1.3.3 is recommended depends_on('mpi', when='+mpi')
depends_on('meep') # must be compiled with -fPIC depends_on('meep~mpi', when='~mpi')
depends_on('meep+mpi', when='+mpi') depends_on('meep+mpi', when='+mpi')
# As of SWIG 3.0.3, Python-style comments are now treated as # As of SWIG 3.0.3, Python-style comments are now treated as