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DeNovoGear: Create new package (#6699)

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Eric 2017-12-16 20:34:53 -06:00 committed by Christoph Junghans
parent 34cf796b54
commit 554d4045fa
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var/spack/repos/builtin/packages/denovogear/package.py Normal file
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##############################################################################
# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class Denovogear(CMakePackage):
"""DeNovoGear is a software package to detect de novo mutations using
next-generation sequencing data. It supports the analysis of many
differential experimental designs and uses advanced statistical models
to reduce the false positve rate."""
homepage = "https://github.com/denovogear/denovogear"
url = "https://github.com/denovogear/denovogear/archive/v1.1.1.tar.gz"
version('1.1.1', 'da30e46851c3a774653e57f98fe62e5f')
version('1.1.0', '7d441d56462efb7ff5d3a6f6bddfd8b9')
depends_on('cmake@3.1:', type=('build'))
depends_on('boost@1.47:1.60', type=('build'))
depends_on('htslib@1.2:', type=('build'))
depends_on('eigen', type=('build'))