From 4c68d2e14e29705d426c803a9f0ce16a22473dd3 Mon Sep 17 00:00:00 2001 From: Dustin Lagoy Date: Mon, 25 Mar 2019 18:03:02 -0700 Subject: [PATCH] py-netcdf4: avoid using system installs of dependencies (#10885) Use environment variables to point setup.py to Spack installations of hdf5/netcdf --- var/spack/repos/builtin/packages/py-netcdf4/package.py | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/var/spack/repos/builtin/packages/py-netcdf4/package.py b/var/spack/repos/builtin/packages/py-netcdf4/package.py index d89a73b331..7409e6dafb 100644 --- a/var/spack/repos/builtin/packages/py-netcdf4/package.py +++ b/var/spack/repos/builtin/packages/py-netcdf4/package.py @@ -23,3 +23,13 @@ class PyNetcdf4(PythonPackage): depends_on('netcdf') depends_on('hdf5@1.8.0:') + + def setup_environment(self, spack_env, run_env): + """Ensure installed netcdf and hdf5 libraries are used""" + # Explicitly set these variables so setup.py won't erroneously pick up + # system versions + spack_env.set('USE_SETUPCFG', '0') + spack_env.set('HDF5_INCDIR', self.spec['hdf5'].prefix.include) + spack_env.set('HDF5_LIBDIR', self.spec['hdf5'].prefix.lib) + spack_env.set('NETCDF4_INCDIR', self.spec['netcdf'].prefix.include) + spack_env.set('NETCDF4_LIBDIR', self.spec['netcdf'].prefix.lib)